EWM30232.1, cds353 (CDS) Nannochloropsis gaditana

Overview
NameEWM30232.1
Unique Namecds353
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:862183..865776 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30232.1
Productdna-directed rna polymerase iii subunit rpc2
Orig transcript idgnl|cribi|Naga_100003g143.1749.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:862183..865776 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0032549ribonucleoside binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR007121RNA_pol_bsu_CS
IPR015712DNA-dir_RNA_pol_su2
IPR007645RNA_pol_Rpb2_3
IPR007647RNA_pol_Rpb2_5
IPR007646RNA_pol_Rpb2_4
IPR014724RNA_pol_RPB2_OB-fold
IPR007644RNA_pol_bsu_protrusion
IPR007642RNA_pol_Rpb2_2
IPR007641RNA_pol_Rpb2_7
IPR007120DNA-dir_RNA_pol_su2_6
Homology
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|553196550|ref|XP_005856370.1| (DNA-directed RNA polymerase III subunit RPC2 [Nannochloropsis gaditana CCMP526] >gi|422292684|gb|EKU19986.1| DNA-directed RNA polymerase III subunit RPC2 [Nannochloropsis gaditana CCMP526] >gi|585112891|gb|EWM30232.1| dna-directed rna polymerase iii subunit rpc2 [Nannochloropsis gaditana])

HSP 1 Score: 2480.29 bits (6427), Expect = 0.000e+0
Identity = 1197/1197 (100.00%), Postives = 1197/1197 (100.00%), Query Frame = 0
Query:    1 MAPPSAENCSSGIKASNASNLGSNFFFTELADQSQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEEAREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGVPRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
            MAPPSAENCSSGIKASNASNLGSNFFFTELADQSQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEEAREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGVPRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF
Sbjct:    1 MAPPSAENCSSGIKASNASNLGSNFFFTELADQSQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEEAREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGVPRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|695455885|ref|XP_009536820.1| (hypothetical protein PHYSODRAFT_340380 [Phytophthora sojae] >gi|348667429|gb|EGZ07254.1| hypothetical protein PHYSODRAFT_340380 [Phytophthora sojae])

HSP 1 Score: 1597.41 bits (4135), Expect = 0.000e+0
Identity = 757/1173 (64.54%), Postives = 928/1173 (79.11%), Query Frame = 0
Query:   34 SQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEE------AREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGV--PRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPE-DTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
            S E++ KPV  V DKWKLLP+FLQLRGL++QHIDSFD+F + ++++IV A +N  +RS+ADPKF+L+YTD+ +G PS+D++A+VS+ VTP QCRLRD TY+AP+ V VRY RG +IV    V+IGRIPIMLRS +C+LAG+SEA LA+ KECPYDPGGYFIV+GVE+V+L+ EQLSKNRVIIEED K NV ASITSSTH+RK R+NIF+  G +VYLK+N  G D+PIV+V + MG++SDQEIV +VG  P++ DA + S EE   L + TQ QAL YIG+K+   T+        MG      A  P+++      AR  LA+++LNHVP  NF+FR K I+V H++RR+L T +DR++LDDKDYYGNKRLELAGQLLSLLFEDLFKR N  LK+QAD  LSKPNR   FD+IKC+RTDTIT GF  A++TGNW L+RFRMDR GVT VL+RLSY+S LGMMTRI+SQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL HVT+DEE  PI++LCFDLG+ DV+L SG EIN +SNYLV LNG+I+G H  P  FV  LR +RR GL+ EFVSV +H+VQR +YIA+DGGRVCRPLL+ +      RLT   + +L SG+  L+ LI  G VEYVDVNEENNCL+ L ++++  + TH+EIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT+A+NQ+ER+D+LLY MVYPQ P+V TR LDLVNF+ +P GQNAIVAVMSYSGYDIEDA+VLNKASLDRGFGRC++ +K+QT ++KYANG+ D + GPP+ D+ A   G G                    R  ++ +LD DGI +VG  + NG++MINKE P    D   G       + P+P +YKGP P++VD+VL+TS+E    LVKV +RQ RRPE+GDKFSSRHGQKGVCG I  QEDMPFND GICPDLIMNPHGFPSRMTVGK+IE +AGKA V+ GR+AYGTAFGE +GSAD V+ CS  LV+NGF+Y GK+ +TSG +GEP+  YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LL ERLM+SSDAF+A VC+ C +LGY GWCQ C+S E++  IR+PYACKLLFQELQ+MN++P+L L E+
Sbjct:    9 SMEELEKPVKSVQDKWKLLPYFLQLRGLVKQHIDSFDYFTSVDMRNIVRAQANNVVRSDADPKFFLQYTDIQLGAPSIDEEAFVSASVTPHQCRLRDRTYAAPVYVSVRYRRGNKIVTNNKVLIGRIPIMLRSSRCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDGKRNVCASITSSTHERKSRTNIFLNKG-RVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLVGSEPDICDAMSASFEEASDLKVFTQQQALEYIGSKMNTLTK-----IGAMGGRNRGGAGRPQQDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDIIKCVRTDTITQGFYHALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEEPGPIKRLCFDLGVTDVSLSSGEEINHASNYLVMLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLIDPVTHRTRLTQRHLDELRSGVRDLSSLIVEGCVEYVDVNEENNCLVTLHESEIGDRTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIAMNQFERIDTLLYTMVYPQMPMVKTRVLDLVNFDRVPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPDFDSLAAPGGAG-----------------MGFRNAKYSSLDADGISRVGGIVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIPAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRQQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEPIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSADVCQGCRMLGYEGWCQHCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 1158          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|953500162|emb|CEG38803.1| (dna-directed rna polymerase iii subunit rpc2 [Plasmopara halstedii])

HSP 1 Score: 1595.1 bits (4129), Expect = 0.000e+0
Identity = 753/1169 (64.41%), Postives = 927/1169 (79.30%), Query Frame = 0
Query:   34 SQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEEAREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGV--PRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTA---AVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
            S ED+ KPV+ + DKWKLLP+FLQLRGL++QHIDSFD+F + +I++IV A +N  +RS+ADPKF+L+YTD+ +G PS+D++A+VS+ VTP QCRLRD TY+AP+ V VRY RG +IV    V+IGRIPIMLRS +C+LAG+SEA LA+ KECPYDPGGYFIV+GVE+V+L+ EQLSKNRVIIEED K NV ASITSSTH+RK R+NIF+  G +VYLK+N  G D+PIV+V + MG++SDQEIV +VG  P++ DA + + EE   L I TQ QAL +IG+K+   T+    G    G    ++  S  + AR  LA ++LNHVP  N++FR K I+V H++RR+L T +DR++LDDKDYYGNKRLELAGQLLSLLFEDLFKR N  LK+QAD  LSKPNR   FD+IKC+RTDTIT GF  A++TGNW L+RFRMDR GVT VL+RLSY+S LGMMTRI+SQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL HVT+DEES PI++LCFDLG+ DV+L SG EIN +SNYLV LNG+I+G H  P  FV  LR +RR GL+ EFVSV +H+VQR +YIA+D GRVCRPLL+ +      RLT   + +L +G+  L+ LI  G VEYVDVNEENNCL+AL ++++    TH+EIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT+A+NQ+ER+D+LLY MVYPQ P+V TR LDLVNF+ +P GQNAIVAVMSYSGYDIEDA+VLNKASLDRGFGRC++ +K+QT ++KYANG+ D + GPP+  +   +V S MG                    R  +F +LD DGI +VG  + NG++++NKE P    D   G       + P+P +YKGP P++VD+VL+TS+E    LVKV VRQ RRPE+GDKFSSRHGQKGVCG I  QEDMPFND GICPDLIMNPHGFPSRMTVGK+IE +AGKA V+ GR+AYGTAFGE +GSAD V+ CS  LV+NGF+Y GK+ +TSG +GE +  YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LL ERLM+SSDAFTA VC+ C +LGY GWCQ C++ E++  I++PYACKLLFQELQ+MN++P+L L E+
Sbjct:   14 SMEDLEKPVSSLKDKWKLLPYFLQLRGLVKQHIDSFDYFTSIDIRNIVRAQANNVVRSDADPKFFLQYTDIQLGAPSIDEEAFVSTSVTPHQCRLRDRTYAAPVYVSVRYRRGNKIVTNNKVLIGRIPIMLRSARCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDAKRNVCASITSSTHERKSRTNIFLNKG-RVYLKSNSFGSDLPIVIVFRGMGVESDQEIVSLVGSEPDICDAMSATFEEASDLKIFTQQQALEFIGSKMNTLTKIGTTGGRHRGAGRPQKERSLVDAARSALAYLLLNHVPCENYNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDIIKCVRTDTITQGFYHALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEESAPIKRLCFDLGVTDVSLSSGEEINHASNYLVILNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDSGRVCRPLLLIDPLTHRTRLTQRHLDELRAGVRDLSSLIVEGCVEYVDVNEENNCLVALHESEIGNLTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIAMNQFERIDTLLYVMVYPQMPMVKTRVLDLVNFDHVPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPDFDSLGTSVGSSMGF-------------------RSAKFSSLDADGISRVGGIVQNGAIIVNKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIPAYVDKVLLTSSEANHFLVKVLVRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVQNGFNYAGKDYLTSGITGEVIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFTADVCQGCRMLGYEGWCQYCKTEEKVVSIQIPYACKLLFQELQAMNIVPRLTLKEY 1162          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|1214711495|gb|OWZ22501.1| (DNA-directed RNA polymerase III [Phytophthora megakarya])

HSP 1 Score: 1590.86 bits (4118), Expect = 0.000e+0
Identity = 753/1170 (64.36%), Postives = 929/1170 (79.40%), Query Frame = 0
Query:   37 DVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEE------AREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGV--PRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPE-DTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
            ++ KPV+ V DKWKLLP+FLQLRGL++QHIDSFD+F + ++++IV A +N  +RS+ADPKF+L+YTD+ +G PS+D++A+VS+ VTP QCRLRD TY+AP+ V VRY RG +IV    V+IGRIPIMLRS +C+LAG+SEA LA+ KECPYDPGGYFIV+GVE+V+L+ EQLSKNRVIIEED+K NV ASITSSTH+RK R+NIF+  G +VYLK+N  G D+PIV+V + MG++SDQE+V +VG  P++ DA + S EE   L + TQ QAL YIG+K+   T+         G      A  P+++      AR  LA+++LNHVP  NF+FR K I+V H++RR+L T +DR++LDDKDYYGNKRLELAGQLLSLLFEDLFKR N  LK+QAD  LSKPNR   FD++KCIRTDTIT GF  A++TGNW L+RFRMDR GVT VL+RLSY+S LGMMTRI+SQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL HVT+DEE  PI++LCFDLG+ DV+L SG EIN +SNYLV LNG+I+G H  P  FV  LR +RR GL+ EFVSV +H+VQR ++IA+DGGRVCRPLL+ +      RLT   + +L +G+  L+ LI  G VEYVDVNEENNCL+AL ++++  + TH+EIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT+A+NQ+ER+D+LLY MVYPQ P+V TR LDLVNF+ +P GQNAIVAVMSYSGYDIEDA+VLNKASLDRGFGRC++ +K+QT ++KYANG+ D + GPP+ D+ A  SG G           G        R  ++ +LD DGI +VG  + NG++MINKE P    D   G       + P+P +YKGP P++VD+VL+TS+E    LVKV +RQ RRPE+GDKFSSRHGQKGVCG I  QEDMPFND GICPDLIMNPHGFPSRMTVGK+IE +AGKA V+ GR+AYGTAFGE +GSAD V+ CS  LV+NGF+Y GK+ +TSG +GE +  YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LL ERLM+SSDAF+A VC+ C +LGY GWCQ C+S E++  IR+PYACKLLFQELQ+MN++P+L L E+
Sbjct:    3 ELEKPVSSVKDKWKLLPYFLQLRGLVKQHIDSFDYFTSVDMRNIVRAQANNVVRSDADPKFFLQYTDIQLGAPSIDEEAFVSASVTPHQCRLRDRTYAAPVYVSVRYRRGNKIVTNNKVLIGRIPIMLRSSRCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDSKHNVCASITSSTHERKSRTNIFLNKG-RVYLKSNSFGSDIPIVIVFRGMGVESDQEMVSLVGSEPDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTK-----IGATGGRLRGGAGRPQQDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDILKCIRTDTITQGFYHALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEEPGPIKRLCFDLGVTDVSLSSGEEINHASNYLVMLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVHIASDGGRVCRPLLLIDPVTQRTRLTQRHLDELRAGVRDLSSLIVEGCVEYVDVNEENNCLVALHESEIGDRTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIAMNQFERIDTLLYTMVYPQMPMVKTRVLDLVNFDHVPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPDFDSLAASSGTG----------VGF-------RNAKYSSLDADGISRVGGIVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIPAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEAIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSADVCQGCRMLGYEGWCQHCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 1149          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|1210527034|dbj|GAX14164.1| (DNA-directed RNA polymerase III subunit RPC2 [Fistulifera solaris])

HSP 1 Score: 1590.86 bits (4118), Expect = 0.000e+0
Identity = 774/1182 (65.48%), Postives = 933/1182 (78.93%), Query Frame = 0
Query:   41 PVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVG-DSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYR---RASSPEEEAREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEE-SEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEK--GVPRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTV-----------KHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESP------ISVADLNMG--SGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLME 1196
            PV  V DKW+LLP+FLQLR L+RQH+DSFD+FV  E++ IV +AS RE+RSE DPKF+LRY    VGEPS+++D+Y    +TPF+CRLRDCTYSAPI V+VRY RGRQ VVKR VMIGRIPIMLRS KC+L  ++   LA  KECPYDPGGYFIVKGVE+VIL+QEQLSKNRVI+E+D KG V ASITSST +RK ++ I +K+G KVYLKNN LG+D+PIV+VLKAMG++SD EIV +VG D P+++ A A SLEEP+  GI TQ QAL Y+GAKIR+ +       +  G  F R   +A SP EEAREVLA+V+L+HVPV++FDFR K +FV H++RRVLL H  +  LDDKDYYGNKRLELAG LLSLLFEDLFK  N +LK+QAD  LSKPNR ++FDV+K IR DTITNG I AI+TGNW L+RFRMDR GVTQVL+RLSY+S LGMMTRINSQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL+H+TTDE+ + PI +LC DLG+EDV  +SG E+N+   +LVFLNGLI+G H RPL+ V  LR +RR+GL  EFVSV LHE QRA++IATDGGRVCRPL++ +   G+PRL    +  L+ G++ +  L+R GVVEYVD NEENN LIA+ +  L V           ++TH+EIDP T+LGVV G+IPYPHHNQSPRNTY  AM KQAMG VA+NQY R+D LLY++VYPQKP+V +RTLDLV+F+ +PGGQNA +AVMSYSGYDIEDA++LNK+S+DRGFGRC++L+KHQTS+R+YANG  D  RGPP D +A   G                   +D R  +++A+D DGIC+VGE + NG +M+NKESP      I  AD+  G  +G     +KP+ + Y+GPAPS+VD+VLITSN     L+KV +RQ RRPE+GDKF+SRHGQKGVCG+IV +ED+PFND G CPDLIMNPHGFPSRMTVGKL+E + GKA V  GRQAY +AFGE+ GSAD  V+ S AL+ NG +Y GK+I+ SGT+GEPL  YIF GPVFYQKLKHMV+DK HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YGAS+L+ ERLM SSDAF+ATVC  CGLL Y  WCQ CRS E +ADIRLPYACKLLFQELQSMNV+P+L+L +
Sbjct:   88 PVGSVQDKWRLLPYFLQLRSLLRQHVDSFDYFVETEMQQIVKSASAREIRSEHDPKFYLRYEACWVGEPSIEEDSYTMKSITPFECRLRDCTYSAPIYVNVRYIRGRQPVVKRNVMIGRIPIMLRSKKCLLRDQTHDALAAMKECPYDPGGYFIVKGVEKVILIQEQLSKNRVILEQDAKG-VCASITSSTRERKSKAYILIKHG-KVYLKNNTLGEDIPIVIVLKAMGVESDVEIVQLVGCDPPQLVHAMALSLEEPHRYGIQTQQQALAYMGAKIRSRS-------AAAGNTFARAGGKALSPAEEAREVLANVVLSHVPVVHFDFRAKAMFVGHIVRRVLLVHLGKMPLDDKDYYGNKRLELAGNLLSLLFEDLFKIFNKELKRQADLVLSKPNRAEAFDVVKTIRPDTITNGMINAISTGNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLSHITTDEDDTNPIERLCRDLGVEDVRRMSGNELNSKDAFLVFLNGLILGIHLRPLQLVEDLRKMRRRGLAGEFVSVYLHEEQRAVHIATDGGRVCRPLIIVDHDTGLPRLKQAHVEALAMGIMDIKALLRQGVVEYVDCNEENNTLIAVTENDLEVAINQGLENRRMRYTHLEIDPFTILGVVGGIIPYPHHNQSPRNTYTVAMAKQAMGCVAMNQYVRMDGLLYSLVYPQKPMVKSRTLDLVDFDNIPGGQNACIAVMSYSGYDIEDAIILNKSSIDRGFGRCMVLKKHQTSVRRYANGTRDRTRGPPTDASAFADG------------------DQDKRFMKYQAIDLDGICKVGEPMDNGFIMVNKESPTDTTTNIVGADIGFGMATGNPNVQYKPSAMPYRGPAPSYVDKVLITSNANEQFLIKVMLRQVRRPEIGDKFASRHGQKGVCGLIVPEEDLPFNDHGHCPDLIMNPHGFPSRMTVGKLLELLVGKAGVYEGRQAYSSAFGEEHGSADTDVSASEALLRNGLNYTGKDILYSGTNGEPLDAYIFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMERLMHSSDAFSATVCLTCGLLQYENWCQYCRSGENVADIRLPYACKLLFQELQSMNVLPRLRLQD 1242          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|301110510|ref|XP_002904335.1| (DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide [Phytophthora infestans T30-4] >gi|262096461|gb|EEY54513.1| DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide [Phytophthora infestans T30-4])

HSP 1 Score: 1589.32 bits (4114), Expect = 0.000e+0
Identity = 754/1172 (64.33%), Postives = 926/1172 (79.01%), Query Frame = 0
Query:   34 SQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEE------AREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGV--PRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
            S E++ KPV+ V DKWKLLP+FLQLRGL++QHIDSFD+F + ++++IV A +N  +RS+ADPKF+L+YTD+ +G PS+D++A+VS+ VTP QCRLRD TY+AP+ V VRY RG +IV    V+IGRIPIMLRS +C+LAG+SEA LA+ KECPYDPGGYFIV+GVE+V+L+ EQLSKNRVIIEED K NV ASITSSTH+RK R+NIF+  G +VYLK+N  G D+PIV+V + MG++SDQEIV +VG   ++ DA + S EE   L + TQ QAL YIG+K+   T+        MG      A  P+ +      AR  LA+++LNHVP  NF+FR K I+V H++RR+L T +DR++LDDKDYYGNKRLELAGQLLSLLFEDLFKR N  LK+QAD  LSKPNR   FD++KC+RTDTIT GF  A++TGNW L+RFRMDR GVT VL+RLSY+S LGMMTRI+SQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL HVT+DEE  PI++LCFDLG+ DV+L SG EIN +SNYLV LNG+I+G H  P  FV  LR +RR GL+ EFVSV +H+VQR +YIA+DGGRVCRPLL+ +      RLT   + +L +G+  L+ LI  G VEYVDVNEENNCL+AL ++++  + TH+EIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT+A+NQ+ER+D+LLY MVYPQ P+V TR LDLVNF+ +P GQNAIVAVMSYSGYDIEDA+VLNKASLDRGFGRC++ +K+QT ++KYANG+ D + GPP+                  +LA A       R  +F +LD DGI +VG  + NG++MINKE P    D   G       + P+P +YKGP P++VD+VL+TS+E    LVKV +RQ RRPE+GDKFSSRHGQKGVCG I  QEDMPFND GICPDLIMNPHGFPSRMTVGK+IE +AGKA V+ GR+AYGTAFGE +GSAD V+ CS  LV+NGF+Y GK+ +TSG +GE +  YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LL ERLM+SSDAF+A VC+ C +LGY GWCQ C+S E++  IR+PYACKLLFQELQ+MN++P+L L E+
Sbjct:   17 SMEELEKPVSSVKDKWKLLPYFLQLRGLVKQHIDSFDYFTSVDMRNIVRAQANNVVRSDADPKFFLQYTDIQLGAPSIDEEAFVSASVTPHQCRLRDRTYAAPVYVSVRYRRGNKIVTNNKVLIGRIPIMLRSSRCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDGKHNVCASITSSTHERKSRTNIFLNKG-RVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLVGSESDICDALSASFEEASDLKVFTQQQALEYIGSKMNALTK-----IGAMGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCDNFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDILKCVRTDTITQGFYHALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEEPAPIKRLCFDLGVTDVSLSSGEEINHASNYLVMLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLIDPVTHRTRLTQRHLDELRAGVRDLSSLIVEGCVEYVDVNEENNCLVALHESEIGDRTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIAMNQFERIDTLLYTMVYPQMPMVKTRVLDLVNFDRVPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPD----------------FDSLAAAGGAGMGFRNAKFSSLDADGISRVGGIVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIPAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEAIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSADVCQGCRMLGYEGWCQHCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 1166          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|1210512051|dbj|GAX28906.1| (DNA-directed RNA polymerase III subunit RPC2 [Fistulifera solaris])

HSP 1 Score: 1588.55 bits (4112), Expect = 0.000e+0
Identity = 772/1182 (65.31%), Postives = 931/1182 (78.76%), Query Frame = 0
Query:   41 PVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVG-DSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYR---RASSPEEEAREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEE-SEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEK--GVPRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTV-----------KHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESP------ISVADLNMG--SGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLME 1196
            PV  V DKW+LLP+FLQLR L+RQH+DSFD+FV  E++ IV +AS RE+RSE DPKF+LRY    VGEPS+++D+Y    +TPF+CRLRDCTYSAPI V+VRY RGRQ VVKR VMIGRIPIMLRS KC+L  ++   LA  KECPYDPGGYFIVKGVE+VIL+QEQLSKNRVI+E+D KG V ASITSST +RK ++ I +K+G KVYLKNN LG+D+PIV+VLKAMG++SD EIV +VG D P+++ A A SLEEP+  GI TQ QAL Y+GAKIR+ +       +  G  F R   +  SP EEAREVLA+V+L+HVPV++FDFR K +F+ H++RRVLL H  +  LDDKDYYGNKRLELAG LLSLLFEDLFK  N +LK+QAD  LSKPNR ++FDV+K IR DTITNG I AI+TGNW L+RFRMDR GVTQVL+RLSY+S LGMMTRINSQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL+H+TTDE+ + PI +LC DLG+EDV  +SG E+N+   +LVFLNGLI+G H RPL+ V  LR +RR+GL  EFVSV LHE QRA++IATDGGRVCRPL++ +   G+PRL    +  L+ G + +  L+R GVVEYVD NEENN LIA+ +  L V           ++TH+EIDP T+LGVV G+IPYPHHNQSPRNTY  AM KQAMG VA+NQY R+D LLY++VYPQKP+V +RTLDLV+F+ +PGGQNA +AVMSYSGYDIEDA++LNK+S+DRGFGRC++L+KHQTS+R+YANG  D  RGPP D +A   G                   +D R  +++A+D DGIC+VGE + NG +M+NKESP      I  AD+  G  +G     +KP+ + Y+GPAPS+VD+VLITSN     L+KV +RQ RRPE+GDKF+SRHGQKGVCG+IV +ED+PFND G CPDLIMNPHGFPSRMTVGKL+E + GKA V  GRQAY +AFGE+ GSAD  V+ S AL+ NG +Y GK+I+ SGT+GEPL  YIF GPVFYQKLKHMV+DK HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YGAS+L+ ERLM SSDAF+ATVC  CGLL Y  WCQ CRS E +ADIRLPYACKLLFQELQSMNV+P+L+L +
Sbjct:   92 PVGSVQDKWRLLPYFLQLRSLLRQHVDSFDYFVETEMQQIVKSASAREIRSEHDPKFYLRYEACWVGEPSIEEDSYTMKSITPFECRLRDCTYSAPIYVNVRYIRGRQPVVKRNVMIGRIPIMLRSKKCLLRDQTHDALAAMKECPYDPGGYFIVKGVEKVILIQEQLSKNRVILEQDAKG-VCASITSSTRERKSKAYILIKHG-KVYLKNNTLGEDIPIVIVLKAMGVESDVEIVQLVGCDPPQLVHAMALSLEEPHRYGIQTQQQALAYMGAKIRSRS-------AAAGSTFARAGGKTLSPAEEAREVLANVVLSHVPVVHFDFRAKAMFIGHIVRRVLLVHLGKMPLDDKDYYGNKRLELAGNLLSLLFEDLFKIFNKELKRQADLVLSKPNRAEAFDVVKTIRPDTITNGMINAISTGNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLSHITTDEDDTNPIERLCRDLGVEDVRRMSGNELNSKDAFLVFLNGLILGIHLRPLQLVEDLRKMRRRGLAGEFVSVYLHEEQRAVHIATDGGRVCRPLIIVDHDTGLPRLKQAHVEALAMGAMDIKALLRQGVVEYVDCNEENNTLIAVTENDLEVAINQGLENRRMRYTHLEIDPFTILGVVGGIIPYPHHNQSPRNTYTVAMAKQAMGCVAMNQYVRMDGLLYSLVYPQKPMVKSRTLDLVDFDNIPGGQNACIAVMSYSGYDIEDAIILNKSSIDRGFGRCMVLKKHQTSVRRYANGTRDRTRGPPTDASAFADG------------------DQDKRFMKYQAIDLDGICKVGEPMDNGFIMVNKESPTDTTTNIVGADIGFGMATGNPNVQYKPSAMPYRGPAPSYVDKVLITSNANEQFLIKVMLRQVRRPEIGDKFASRHGQKGVCGLIVPEEDLPFNDHGHCPDLIMNPHGFPSRMTVGKLLELLVGKAGVYEGRQAYSSAFGEEHGSADTDVSASEALLRNGLNYTGKDILYSGTNGEPLDAYIFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMERLMHSSDAFSATVCLTCGLLQYENWCQYCRSGENVADIRLPYACKLLFQELQSMNVLPRLRLQD 1246          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|567985178|gb|ETL35525.1| (hypothetical protein L916_12342 [Phytophthora parasitica] >gi|570322750|gb|ETO70698.1| hypothetical protein F444_12820 [Phytophthora parasitica P1976])

HSP 1 Score: 1585.85 bits (4105), Expect = 0.000e+0
Identity = 752/1172 (64.16%), Postives = 925/1172 (78.92%), Query Frame = 0
Query:   34 SQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEE------AREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGV--PRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
            S E++ KPV+ V DKWKLLP+FLQLRGL++QHIDSFD+F + ++++IV A +N  +RS+ADPKF+L+YTD+ +G PS+D++A+VS+ VTP QCRLRD TY+AP+ V VRY RG +IV    V+IGRIPIMLRS +C+LAG+SEA LA+ KECPYDPGGYFIV+GVE+V+L+ EQLSKNRVIIEED K NV ASITSSTH+RK R+NIF+  G +VYLK+N  G D+PIV+V + MG++SDQEIV +VG   ++ DA + S EE   L + TQ QAL YIG+K+   T+         G      A  P+ +      AR  LA+++LNHVP  NF+FR K I+V H++RR+L T +DR++LDDKDYYGNKRLELAGQLLSLLFEDLFKR N  LK+QAD  LSKPNR   FD++KC+RTDTIT GF  A++TGNW L+RFRMDR GVT VL+RLSY+S LGMMTRI+SQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL HVT+DEE  PI++LCFDLG+ DV+L SG EIN +SNYLV LNG+I+G H  P  FV  LR +RR GL+ EFVSV +H+VQR +YIA+DGGRVCRPLL+ +      RLT   + +L +G+  L+ LI  G VEYVDVNEENNCL+AL ++++  + TH+EIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT+A+NQ+ER+D+LLY MVYPQ P+V TR LDLVNF+ +P GQNAIVAVMSYSGYDIEDA+VLNKASLDRGFGRC++ +K+QT ++KYANG+ D + GPP+                  +LA A       R  ++ +LD DGI +VG  + NG++MINKE P    D   G       + P+P +YKGP P++VD+VL+TS+E    LVKV +RQ RRPE+GDKFSSRHGQKGVCG I  QEDMPFND GICPDLIMNPHGFPSRMTVGK+IE +AGKA V+ GR+AYGTAFGE +GSAD V+ CS  LV+NGF+Y GK+ +TSG +GE +  YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LL ERLM+SSDAF+A VC+ C +LGY GWCQ C+S E++  IR+PYACKLLFQELQ+MN++P+L L E+
Sbjct:   17 SMEELEKPVSSVKDKWKLLPYFLQLRGLVKQHIDSFDYFTSVDMRNIVRAQANNVVRSDADPKFFLQYTDIQLGAPSIDEEAFVSASVTPHQCRLRDRTYAAPVYVSVRYRRGNKIVTNNKVLIGRIPIMLRSSRCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDGKHNVCASITSSTHERKSRTNIFLNKG-RVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTK-----IGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDILKCVRTDTITQGFYHALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEEPAPIKRLCFDLGVTDVSLSSGEEINHASNYLVMLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLIDPVTHRTRLTQRHLDELRAGVRDLSSLIVEGCVEYVDVNEENNCLVALHESEIGDRTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIAMNQFERIDTLLYTMVYPQMPMVKTRVLDLVNFDRVPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPD----------------FDSLAAAGGAGMGFRNAKYSSLDADGISRVGGIVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIPAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEAIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSADVCQGCRMLGYEGWCQHCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 1166          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|570978883|gb|ETP39974.1| (hypothetical protein F442_12621 [Phytophthora parasitica P10297])

HSP 1 Score: 1584.7 bits (4102), Expect = 0.000e+0
Identity = 751/1170 (64.19%), Postives = 924/1170 (78.97%), Query Frame = 0
Query:   36 EDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEE------AREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGV--PRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
            E++ KPV+ V DKWKLLP+FLQLRGL++QHIDSFD+F + ++++IV A +N  +RS+ADPKF+L+YTD+ +G PS+D++A+VS+ VTP QCRLRD TY+AP+ V VRY RG +IV    V+IGRIPIMLRS +C+LAG+SEA LA+ KECPYDPGGYFIV+GVE+V+L+ EQLSKNRVIIEED K NV ASITSSTH+RK R+NIF+  G +VYLK+N  G D+PIV+V + MG++SDQEIV +VG   ++ DA + S EE   L + TQ QAL YIG+K+   T+         G      A  P+ +      AR  LA+++LNHVP  NF+FR K I+V H++RR+L T +DR++LDDKDYYGNKRLELAGQLLSLLFEDLFKR N  LK+QAD  LSKPNR   FD++KC+RTDTIT GF  A++TGNW L+RFRMDR GVT VL+RLSY+S LGMMTRI+SQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL HVT+DEE  PI++LCFDLG+ DV+L SG EIN +SNYLV LNG+I+G H  P  FV  LR +RR GL+ EFVSV +H+VQR +YIA+DGGRVCRPLL+ +      RLT   + +L +G+  L+ LI  G VEYVDVNEENNCL+AL ++++  + TH+EIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT+A+NQ+ER+D+LLY MVYPQ P+V TR LDLVNF+ +P GQNAIVAVMSYSGYDIEDA+VLNKASLDRGFGRC++ +K+QT ++KYANG+ D + GPP+                  +LA A       R  ++ +LD DGI +VG  + NG++MINKE P    D   G       + P+P +YKGP P++VD+VL+TS+E    LVKV +RQ RRPE+GDKFSSRHGQKGVCG I  QEDMPFND GICPDLIMNPHGFPSRMTVGK+IE +AGKA V+ GR+AYGTAFGE +GSAD V+ CS  LV+NGF+Y GK+ +TSG +GE +  YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LL ERLM+SSDAF+A VC+ C +LGY GWCQ C+S E++  IR+PYACKLLFQELQ+MN++P+L L E+
Sbjct:   22 EELEKPVSSVKDKWKLLPYFLQLRGLVKQHIDSFDYFTSVDMRNIVRAQANNVVRSDADPKFFLQYTDIQLGAPSIDEEAFVSASVTPHQCRLRDRTYAAPVYVSVRYRRGNKIVTNNKVLIGRIPIMLRSSRCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDGKHNVCASITSSTHERKSRTNIFLNKG-RVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTK-----IGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDILKCVRTDTITQGFYHALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEEPAPIKRLCFDLGVTDVSLSSGEEINHASNYLVMLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLIDPVTHRTRLTQRHLDELRAGVRDLSSLIVEGCVEYVDVNEENNCLVALHESEIGDRTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIAMNQFERIDTLLYTMVYPQMPMVKTRVLDLVNFDRVPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPD----------------FDSLAAAGGAGMGFRNAKYSSLDADGISRVGGIVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIPAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEAIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSADVCQGCRMLGYEGWCQHCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 1169          
BLAST of EWM30232.1 vs. NCBI_GenBank
Match: gi|675200383|ref|XP_008909076.1| (hypothetical protein PPTG_14263 [Phytophthora parasitica INRA-310] >gi|568090725|gb|ETN05554.1| hypothetical protein PPTG_14263 [Phytophthora parasitica INRA-310])

HSP 1 Score: 1583.93 bits (4100), Expect = 0.000e+0
Identity = 751/1172 (64.08%), Postives = 924/1172 (78.84%), Query Frame = 0
Query:   34 SQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFAFYRRASSPEEE------AREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIRTDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGV--PRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
            S E++ KPV+ V DKWKLLP+FLQLRGL++QHIDSFD+F + ++++IV A +N  +RS+ADPKF+L+YTD+ +G PS+D++A+VS+ VTP QCRLRD TY+AP+ V VRY RG +IV    V+IGRIPIMLRS +C+LAG+SEA LA+ KECPYDPGGYFIV+GVE+V+L+ EQLSKNRVIIEED K NV ASITSSTH+RK R+NIF+  G +VYLK+N  G D+PIV+V + MG++SDQEIV +VG   ++ DA + S EE   L + TQ QAL YIG+K+   T+         G      A  P+ +      AR  LA+++LNHVP  NF+FR K I+V H++RR+L T +DR++LDDKDYYGNKRLELAGQLLSLLFEDLFKR N  LK+QAD  LSKPNR   FD++KC+RTDTIT GF  A++TGNW L+RFRMDR GVT VL+RLSY+S LGMMTRI+SQFEKTRKVSGPRSLQPSQWGM+CPADTPEGEACGLVKNLALL HVT+DEE  PI++LCFDLG+ DV+L SG EIN +SNYLV LNG+I+G H  P  FV  LR +RR GL+ EFVSV +H+VQR +YIA+DGGRVCRPLL+ +      RLT   + +L +G+  L+ LI  G VEYVDVNEENNCL+AL ++++  + TH+EIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT+A+NQ+ER+D+LLY MVYPQ P+V TR LDLVNF+ +P GQNAIVAVMSYSGYDIEDA+VLNKASLDRGFGRC++ +K+QT ++KYANG+ D + GPP+                  +LA A       R  ++ +LD DGI +VG  + NG++MINKE P    D   G       + P+P +YKGP P++VD+VL+TS+E    LVKV +RQ RRPE+GDKFSSRHGQKGVCG I  QEDMPFND GICPDLIMNPHGFPSRMTVGK+IE +AGKA V+ GR+AYGTAFGE +GSAD V+ CS  LV+NGF+Y GK+ +TSG +GE +  YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LL ERLM+SSDAF+  VC+ C +LGY GWCQ C+S E++  IR+PYACKLLFQELQ+MN++P+L L E+
Sbjct:   17 SMEELEKPVSSVKDKWKLLPYFLQLRGLVKQHIDSFDYFTSVDMRNIVRAQANNVVRSDADPKFFLQYTDIQLGAPSIDEEAFVSASVTPHQCRLRDRTYAAPVYVSVRYRRGNKIVTNNKVLIGRIPIMLRSSRCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDGKHNVCASITSSTHERKSRTNIFLNKG-RVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTK-----IGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDILKCVRTDTITQGFYHALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEEPAPIKRLCFDLGVTDVSLSSGEEINHASNYLVMLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLIDPVTHRTRLTQRHLDELRAGVRDLSSLIVEGCVEYVDVNEENNCLVALHESEIGDRTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIAMNQFERIDTLLYTMVYPQMPMVKTRVLDLVNFDRVPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPD----------------FDSLAAAGGAGMGFRNAKYSSLDADGISRVGGIVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIPAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEAIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSVDVCQGCRMLGYEGWCQHCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 1166          
The following BLAST results are available for this feature:
BLAST of EWM30232.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553196550|ref|XP_005856370.1|0.000e+0100.00DNA-directed RNA polymerase III subunit RPC2 [Nann... [more]
gi|695455885|ref|XP_009536820.1|0.000e+064.54hypothetical protein PHYSODRAFT_340380 [Phytophtho... [more]
gi|953500162|emb|CEG38803.1|0.000e+064.41dna-directed rna polymerase iii subunit rpc2 [Plas... [more]
gi|1214711495|gb|OWZ22501.1|0.000e+064.36DNA-directed RNA polymerase III [Phytophthora mega... [more]
gi|1210527034|dbj|GAX14164.1|0.000e+065.48DNA-directed RNA polymerase III subunit RPC2 [Fist... [more]
gi|301110510|ref|XP_002904335.1|0.000e+064.33DNA-directed RNA polymerase III subunit 127.6 kDa ... [more]
gi|1210512051|dbj|GAX28906.1|0.000e+065.31DNA-directed RNA polymerase III subunit RPC2 [Fist... [more]
gi|567985178|gb|ETL35525.1|0.000e+064.16hypothetical protein L916_12342 [Phytophthora para... [more]
gi|570978883|gb|ETP39974.1|0.000e+064.19hypothetical protein F442_12621 [Phytophthora para... [more]
gi|675200383|ref|XP_008909076.1|0.000e+064.08hypothetical protein PPTG_14263 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna353rna353Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications