EWM27134.1, cds3521 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|585109314|gb|EWM27134.1| (ef-1 guanine nucleotide exchange domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 454.907 bits (1169), Expect = 6.595e-162 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query: 1 MPSKFDFSKGFGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGDGRAVASASKKASAPAVATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
MPSKFDFSKGFGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGDGRAVASASKKASAPAVATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL
Sbjct: 1 MPSKFDFSKGFGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGDGRAVASASKKASAPAVATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|585105124|gb|EWM23852.1| (ef-1 guanine nucleotide exchange domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 189.889 bits (481), Expect = 9.778e-58 Identity = 108/122 (88.52%), Postives = 117/122 (95.90%), Query Frame = 0
Query: 103 EDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
ED + K TMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDT+V+LD LYKTIK+E+CP GLTWGEGYNK+PVAFGIFKLIIS+VV+DDEVSIDDVV+KIEAMEDSVQSVDINSFNKL
Sbjct: 68 EDETPKATMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTDVDLDALYKTIKKEVCPPGLTWGEGYNKAPVAFGIFKLIISLVVFDDEVSIDDVVDKIEAMEDSVQSVDINSFNKL 189
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|553182754|ref|XP_005853780.1| (ef-1 guanine nucleotide exchange domain-containing [Nannochloropsis gaditana CCMP526] >gi|422295281|gb|EKU22580.1| ef-1 guanine nucleotide exchange domain-containing [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 188.734 bits (478), Expect = 1.791e-57 Identity = 108/122 (88.52%), Postives = 117/122 (95.90%), Query Frame = 0
Query: 103 EDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
ED + K TMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDT+V+LD LYKTIK+E+CP GLTWGEGYNK+PVAFGIFKLIIS+VV+DDEVSIDDVV+KIEAMEDSVQSVDINSFNKL
Sbjct: 47 EDETPKATMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTDVDLDALYKTIKKEVCPPGLTWGEGYNKAPVAFGIFKLIISLVVFDDEVSIDDVVDKIEAMEDSVQSVDINSFNKL 168
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|501751672|emb|CCG84137.1| (protein of unknown function [Taphrina deformans PYCC 5710]) HSP 1 Score: 151.754 bits (382), Expect = 3.068e-42 Identity = 97/230 (42.17%), Postives = 130/230 (56.52%), Query Frame = 0
Query: 5 FDFSKGFGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGDG---------RAVASASKKASAPAVATDDDDMDLFG-DDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
FD S LE HL+TRSYIEGF S AD + F+ L + P AS +P+A RWY HIAS T L GD AS + K +APA D+DD+DLFG DDDE+ R +++A A+K KEK K S + ++VKP D E ++ EL +++ I GL WG G PV +G+ KL I++V+ DD+V +DD+ + I ED VQS DI + KL
Sbjct: 3 FDLSSSISGLESHLATRSYIEGFEPSQADVALFNELKTAPSASEYPHAARWYEHIASYTEEHGSLPGDSSKPYSSYGPETSASEATKEAAPAA--DEDDIDLFGSDDDEEEDQAAIDLREKRLAEYAAKKAGKEKPAAK---SVVTMDVKPWDDETDMKELEASVR-SITMDGLVWGGG-KLVPVGYGVSKLQINLVIEDDKVGLDDLQDAIAEFEDYVQSSDIAAMQKL 225
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|219126454|ref|XP_002183472.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405228|gb|EEC45172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 142.124 bits (357), Expect = 3.449e-38 Identity = 94/223 (42.15%), Postives = 133/223 (59.64%), Query Frame = 0
Query: 4 KFDFS--KGFGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGDGRAVASASKKASAPAVATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
+FD S KG + ++SYIEG+SFS ADS F+ SVP A+ P++YRWY+H+A+L G++ G + A A+ A A A A +D+ D+FGDDDE +P SRA+ +A +K E E + + R+ + +E+KP D E +L L+K I E I GL WGE N + VA+GI K+ + V+ + S DDVVEKI MED VQS ++ S N L
Sbjct: 39 QFDVSSDKGAAAFNGFMGSKSYIEGWSFSPADSEMFAKFESVPDAAKFPHSYRWYIHVAALQGVR---GLNLSPPAPAAAAAPAAAKADAEDEFDVFGDDDE-EDDEPKESRADMLARLKKEAEERTAKKEANQRTLVAIEIKPWDVEQDLMVLWKKITETIVQDGLKWGESCNLADVAYGIKKIQCTFVMGVNNSS-DDVVEKILEMEDEVQSCEVTSMNVL 256
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|953488825|emb|CEG47691.1| (ef-1 guanine nucleotide exchange domain-containing [Plasmopara halstedii]) HSP 1 Score: 140.584 bits (353), Expect = 5.653e-38 Identity = 95/216 (43.98%), Postives = 131/216 (60.65%), Query Frame = 0
Query: 10 GFGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGDGRAVASASKKASAPA-VATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
G L L++RSYIEGF FS+AD+ F SVP A+ + N YRWY+H+A+ GL+ IL + V + +K A A + V DD + D D+D ++A +A K AK++ K +RSQ+V+EVKP + E +L+EL IK + GL+WGEG+ PVAFGI KL++ V+ D+ V +DD+ E IEA ED VQSVDI S NKL
Sbjct: 13 GLKKLNGFLTSRSYIEGFKFSSADADLFHKFLSVPDAAKYANVYRWYVHVAARLGLRAILV--TKKVTATTKAAVASSKVVKDDGNDDDDLFGDDDEDEDDEAAKALAAKRAEAAKAAKKEKKKPVERSQVVIEVKPWEAETDLEELAVKIK-ALPIEGLSWGEGHKLVPVAFGIKKLLVQCVIVDELVLLDDITEAIEAFEDYVQSVDIASMNKL 225
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|673041401|ref|XP_008874661.1| (hypothetical protein H310_10160 [Aphanomyces invadans] >gi|574469871|gb|ETV96884.1| hypothetical protein H310_10160 [Aphanomyces invadans]) HSP 1 Score: 140.969 bits (354), Expect = 6.556e-38 Identity = 99/228 (43.42%), Postives = 128/228 (56.14%), Query Frame = 0
Query: 10 GFGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGDGRAVAS-----ASKKASAPAVATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKR-------DRSQIVLEVKPTDTEVNLDELYKTIKE-EICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
G L L+ +SYIEGF FSAADS+ F+ +VP A+ PN YRWY+HIAS GL+ L + A A+ K S P +T DDD+D + AA +A K+ E A + +RSQ+VLEVKP + E +L EL IK EI +GL WGEG+ PVAFGI KL+I ++ DD V +DD+ E IEA ED VQSVD+ S NK+
Sbjct: 11 GLKKLNGFLTAKSYIEGFQFSAADSALFAKFNAVPDAAKVPNVYRWYIHIASKLGLRVALAARTPSAAKPSTPKAAAKPSTPKASTPKGKKPAADDDDDDLFGDDDDDEEAEAAAKEAAKKRAEAAKAGKKEKAKPVERSQVVLEVKPWEAETDLVELAGKIKALEI--NGLNWGEGHKLVPVAFGIKKLLIQCIIVDDLVLLDDITEAIEAFEDYVQSVDVASMNKV 236
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|325186356|emb|CCA20862.1| (EF1 guanine nucleotide exchange domaincontaining protein putative [Albugo laibachii Nc14]) HSP 1 Score: 138.658 bits (348), Expect = 2.882e-37 Identity = 99/230 (43.04%), Postives = 137/230 (59.57%), Query Frame = 0
Query: 1 MPSKF---DFSKGFGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGDGRAVASASKKASAPAVATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDEL---YKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
MP +F D +G L L+++SYIEG+S S AD + F +PS P S +PN YRWY+HIAS G++ + G +A T++DD DLFGDDD++ +A+ RAE K K K+ +RSQ+V+EVKP D E +L+ L K+ K+E GLTWGEG+ VA+GI KL++ V+ DD VS++D+ + IE EDSVQSVDI S NK+
Sbjct: 1 MPMQFTQLDKPEGLKKLNGFLTSKSYIEGYSLSDADLTLFKQIPSCPEPSQYPNVYRWYVHIASKFGVRALWSG----IAPKKTPTEPSKTQTEEDDDDLFGDDDDEEAAEAAKKRAETAKNAKEAKNKKKVV----ERSQVVVEVKPWDKETDLEALAIKIKSTKKE----GLTWGEGHKLVDVAYGIKKLLVQCVILDDMVSLEDITDIIEQFEDSVQSVDIASMNKI 218
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|646302746|gb|KDQ23895.1| (hypothetical protein PLEOSDRAFT_1067950 [Pleurotus ostreatus PC15]) HSP 1 Score: 137.887 bits (346), Expect = 5.522e-37 Identity = 94/214 (43.93%), Postives = 125/214 (58.41%), Query Frame = 0
Query: 14 LEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGD---GRAVASASKKASAPAVATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
LE+HL++RSY+EG++ S AD F A+ S P AS+ P+ RWY HI S L G G A +A A A A DDDD+DLFG DDE+ +A+ +AE+VAA A+K K K K S + LEVKP D E ++ L K ++ I GL WG P+ +GI KL I++VV D++VS D++ EKI ED VQS DI + KL
Sbjct: 7 LEQHLASRSYVEGYAPSQADVHVFKAIASAPDASAQPHVARWYNHIKSYAAEHDSLPGSSTAGEAFVGGDAEAPAGAAADDDDDVDLFGSDDEEDNAEAERIKAERVAAYNAKKAGKAKTVAK---SVVTLEVKPWDDETDMAALEKAVR-SIEQDGLLWGSS-KLVPIGYGIRKLQITLVVEDEKVSTDELQEKIAEFEDYVQSTDIAAMQKL 215
BLAST of EWM27134.1 vs. NCBI_GenBank
Match: gi|449543926|gb|EMD34900.1| (hypothetical protein CERSUDRAFT_85667 [Gelatoporia subvermispora B]) HSP 1 Score: 137.502 bits (345), Expect = 7.387e-37 Identity = 95/217 (43.78%), Postives = 128/217 (58.99%), Query Frame = 0
Query: 11 FGDLEKHLSTRSYIEGFSFSAADSSTFSALPSVPVASSHPNAYRWYLHIASLTGLKKILGGD---GRAVASASKKASAPAVATDDDDMDLFGDDDEDSSAKPTMSRAEQVAAMKAEKEAKEKANKKRDRSQIVLEVKPTDTEVNLDELYKTIKEEICPSGLTWGEGYNKSPVAFGIFKLIISMVVYDDEVSIDDVVEKIEAMEDSVQSVDINSFNKL 224
F LE HL++RSY+EG++ S AD F A+ SVP AS++P+ RWY HIAS L G G A + A A A DDD++DLFG DDE+ A+ +AE+VAA +A+K K K K S + LEVKP D E ++ L ++++ I GL WG PV +G+ KL I++VV D+ VS+DD+ EKI ED VQS DI + KL
Sbjct: 5 FTKLESHLASRSYVEGYTPSQADVHVFKAITSVPSASAYPHIARWYTHIASYASEHASLPGSSTAGEAFFGTAAAAPAAAAEEDDDEVDLFGSDDEE-DAEAERIKAERVAAYQAKKANKPKTIAK---SVVTLEVKPWDDETDMAALEESVR-SIEMEGLVWGAS-KLVPVGYGVRKLQITLVVEDELVSLDDLQEKIAEFEDYVQSSDIAAMQKL 215 The following BLAST results are available for this feature:
BLAST of EWM27134.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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