EWM27138.1, cds3517 (CDS) Nannochloropsis gaditana

Overview
NameEWM27138.1
Unique Namecds3517
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:607728..608015 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27138.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100010g84.6108.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:607728..608015 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27138.1 vs. NCBI_GenBank
Match: gi|585109318|gb|EWM27138.1| (hypothetical protein Naga_100010g84 [Nannochloropsis gaditana])

HSP 1 Score: 191.815 bits (486), Expect = 6.990e-62
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 MVISAAEQNSMKLVKTRKRHVDFRRELVLREEHVFYHELVKMVPKLASLRRMLDDSVLSKLVGKSRSLEDSLPDYYHLNEATNIALHGEFHEEED 95
            MVISAAEQNSMKLVKTRKRHVDFRRELVLREEHVFYHELVKMVPKLASLRRMLDDSVLSKLVGKSRSLEDSLPDYYHLNEATNIALHGEFHEEED
Sbjct:    1 MVISAAEQNSMKLVKTRKRHVDFRRELVLREEHVFYHELVKMVPKLASLRRMLDDSVLSKLVGKSRSLEDSLPDYYHLNEATNIALHGEFHEEED 95
The following BLAST results are available for this feature:
BLAST of EWM27138.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109318|gb|EWM27138.1|6.990e-62100.00hypothetical protein Naga_100010g84 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3526rna3526Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications