EWM27170.1, cds3515 (CDS) Nannochloropsis gaditana

Overview
NameEWM27170.1
Unique Namecds3515
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:604515..604628 +
Alignment locationCM002461.1:604673..604954 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27170.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100010g82.6140.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:604515..604628 +
CM002461.1supercontigCM002461.1:604673..604954 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27170.1 vs. NCBI_GenBank
Match: gi|585109350|gb|EWM27170.1| (hypothetical protein Naga_100010g82 [Nannochloropsis gaditana])

HSP 1 Score: 274.633 bits (701), Expect = 1.562e-93
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 
Query:    1 MCSYRLVQREELVTCATINRGHDLDIGSIARSLERPRASDSHTPRGRALLETLKSVMEYFDHIGSPPKPECYVYPPPIQCYGKDTCVPFYSKFCHLILSKLLMKRLTNRFLFFAQGHFLKQKCFDVSWPPR 131
            MCSYRLVQREELVTCATINRGHDLDIGSIARSLERPRASDSHTPRGRALLETLKSVMEYFDHIGSPPKPECYVYPPPIQCYGKDTCVPFYSKFCHLILSKLLMKRLTNRFLFFAQGHFLKQKCFDVSWPPR
Sbjct:    1 MCSYRLVQREELVTCATINRGHDLDIGSIARSLERPRASDSHTPRGRALLETLKSVMEYFDHIGSPPKPECYVYPPPIQCYGKDTCVPFYSKFCHLILSKLLMKRLTNRFLFFAQGHFLKQKCFDVSWPPR 131
The following BLAST results are available for this feature:
BLAST of EWM27170.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109350|gb|EWM27170.1|1.562e-93100.00hypothetical protein Naga_100010g82 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3524rna3524Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications