EWM27157.1, cds3510 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|585109337|gb|EWM27157.1| (histone chaperone [Nannochloropsis gaditana]) HSP 1 Score: 488.804 bits (1257), Expect = 1.694e-174 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQDGEEEEGEEEEEEEEAEDDRELEGGEESEEGSVVQGDDAMAMELSSPVPRAQMREGTV 245
MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQDGEEEEGEEEEEEEEAEDDRELEGGEESEEGSVVQGDDAMAMELSSPVPRAQMREGTV
Sbjct: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQDGEEEEGEEEEEEEEAEDDRELEGGEESEEGSVVQGDDAMAMELSSPVPRAQMREGTV 245
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|673049751|ref|XP_008878836.1| (hypothetical protein H310_13206 [Aphanomyces invadans] >gi|574465492|gb|ETV92529.1| hypothetical protein H310_13206 [Aphanomyces invadans]) HSP 1 Score: 243.047 bits (619), Expect = 1.757e-77 Identity = 117/187 (62.57%), Postives = 141/187 (75.40%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQ 187
MA V LTNI VLDNPT+FTNPF FEVTFEC LEDDLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS PD + IPEED +GVTV+L+TC+Y+ +EFVRVGYYVNN+Y +PF ++PP VD+ KL RNILADKPRVTRFPIDW G G V +E A + + D L++++
Sbjct: 1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPDPNNIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLENPPAVVDIHKLQRNILADKPRVTRFPIDW--APGATGAGASAVFDENMNASDLNEMDMLNEEE 185
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|698815430|ref|XP_009840744.1| (hypothetical protein H257_14579 [Aphanomyces astaci] >gi|574104197|gb|ETV69730.1| hypothetical protein H257_14579 [Aphanomyces astaci]) HSP 1 Score: 240.35 bits (612), Expect = 2.022e-76 Identity = 117/187 (62.57%), Postives = 140/187 (74.87%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQ 187
MA V LTNI VLDNPT+FTNPF FEVTFEC LEDDLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS PD S IPEED +GVTV+L+TC+Y+ +EFVRVGYYVNN+Y +PF ++PP VD+ KL RNILADKPRVTRFPIDW G G +E A + + D L++++
Sbjct: 1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPDSSIIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLENPPAIVDIHKLQRNILADKPRVTRFPIDW--APGATGAPATAEFDENMNASDLNEMDMLNEEE 185
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|325185710|emb|CCA20191.1| (histone chaperone ASF1like protein putative [Albugo laibachii Nc14]) HSP 1 Score: 236.113 bits (601), Expect = 9.591e-75 Identity = 113/167 (67.66%), Postives = 130/167 (77.84%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQV 167
MA V LTNI VL NPT+FTNPF FEVTFEC LEDDLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS P+ IP+ D IGVTV+L+TC+YR +EFVRVGYYVNN+YA+P ++PP VD+ KL RNILADKPRVTRFPIDW G+G GG V
Sbjct: 1 MAFVTLTNITVLANPTAFTNPFQFEVTFECAHALEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPDMIPDCDKIGVTVVLLTCSYRSKEFVRVGYYVNNDYADPLMLENPPPTVDVSKLQRNILADKPRVTRFPIDWSSGLG--GGNMDCV 165
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|1173953740|gb|OQS01262.1| (histone chaperone ASF1-like protein [Achlya hypogyna]) HSP 1 Score: 235.728 bits (600), Expect = 1.184e-74 Identity = 109/154 (70.78%), Postives = 126/154 (81.82%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWG 154
MA V LTNI VLDNPT+FTNPF FEVTFEC LEDDLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS P+ + IP+ED IGVTV+L+TC+Y+ +EFVRVGYYVNN+Y +PF + PP VD+ KL RNILADKPRVTRFPIDW
Sbjct: 1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPALIPDEDKIGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLEAPPATVDITKLQRNILADKPRVTRFPIDWA 154
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|1214713406|gb|OWZ24300.1| (Histone chaperone ASF1 [Phytophthora megakarya]) HSP 1 Score: 236.113 bits (601), Expect = 1.568e-74 Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDW 153
MA V LTNI VLDNPT+FTNPF FEVTFEC Q LE DLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS P+ IP+ED +GVTV L+TC+YR +EFVRVGYYVNN+YA+PF ++PP PVD+ KL RN+LADKPRVTRFPIDW
Sbjct: 1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAQPLEADLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSDPPNPDMIPDEDKVGVTVALVTCSYRGREFVRVGYYVNNDYADPFLLENPPAPVDVSKLQRNVLADKPRVTRFPIDW 153
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|669155068|ref|XP_008613096.1| (histone chaperone ASF1 [Saprolegnia diclina VS20] >gi|530735214|gb|EQC33456.1| histone chaperone ASF1 [Saprolegnia diclina VS20]) HSP 1 Score: 233.802 bits (595), Expect = 4.999e-74 Identity = 109/154 (70.78%), Postives = 126/154 (81.82%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWG 154
MA V LTNI VLDNPT+FTNPF FEVTFEC LEDDLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS P+ S IP+ED IGVTV+L+TC Y+ +EFVRVGYYVNN+Y++P ++PP VD+ KL RNILADKPRVTRFPIDW
Sbjct: 1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPSLIPDEDKIGVTVVLVTCAYKGREFVRVGYYVNNDYSDPALIENPPASVDITKLARNILADKPRVTRFPIDWA 154
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|635366739|emb|CCI44975.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 233.802 bits (595), Expect = 8.853e-74 Identity = 126/234 (53.85%), Postives = 153/234 (65.38%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGM-----------GVEGGQQQQVT-------EEEAAAEGVVDFDALDQQQDGEEEE---GEEEEEEEEAEDDRELEGGE 213
MA V LTNI VL NPT+FTNPF FEVTFEC LEDDLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS P+ IP+ D IGVTV+L+TC+YR +EFVRVGYYVNN+YA+P ++PP VD+ KL RNILADKPRVTRFPIDW G+ G+ G + E+ A +D D D DG+E ++ E E ++D +LEG E
Sbjct: 1 MAFVTLTNITVLANPTAFTNPFQFEVTFECAHALEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPEMIPDCDKIGVTVVLLTCSYRSKEFVRVGYYVNNDYADPLMLENPPSTVDVSKLQRNILADKPRVTRFPIDWSSGVPEDNMNCVDPTGISQGANSTIKLDAEFVDEDLLKAAAHLDSDYPDIVIDGDEGMDWLANDQLENEGDDEDIDLEGDE 234
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|301095792|ref|XP_002896995.1| (histone chaperone ASF1-like protein [Phytophthora infestans T30-4] >gi|262108424|gb|EEY66476.1| histone chaperone ASF1-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 233.802 bits (595), Expect = 1.400e-73 Identity = 110/153 (71.90%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDW 153
MA V LTNI VLDNPT+FTNPF FEVTFEC Q LE DLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS P+ IP+ED +GVTV L+TC+YR +EFVRVGYYVNN+YA+PF ++PP VD+ KL RNILADKPRVTRFPIDW
Sbjct: 1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAQPLEADLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSDPPNPDMIPDEDKVGVTVALVTCSYRGREFVRVGYYVNNDYADPFLLENPPARVDVSKLQRNILADKPRVTRFPIDW 153
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|567959965|gb|ETK85529.1| (hypothetical protein L915_09679 [Phytophthora parasitica] >gi|567988695|gb|ETL38968.1| hypothetical protein L916_09583 [Phytophthora parasitica] >gi|568017912|gb|ETL92089.1| hypothetical protein L917_09508 [Phytophthora parasitica] >gi|568048332|gb|ETM45388.1| hypothetical protein L914_09547 [Phytophthora parasitica] >gi|570326273|gb|ETO74221.1| hypothetical protein F444_09975 [Phytophthora parasitica P1976] >gi|570950128|gb|ETP15385.1| hypothetical protein F441_09831 [Phytophthora parasitica CJ01A1] >gi|570983690|gb|ETP43472.1| hypothetical protein F442_09786 [Phytophthora parasitica P10297] >gi|970634179|gb|KUF79521.1| Histone chaperone ASF1 protein [Phytophthora nicotianae]) HSP 1 Score: 233.802 bits (595), Expect = 1.716e-73 Identity = 110/153 (71.90%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDW 153
MA V LTNI VLDNPT+FTNPF FEVTFEC Q LE DLEWK+ YV SAE+ +DQVLEEV+VGPVPVG NKFV QS P+ IP+ED +GVTV L+TC+YR +EFVRVGYYVNN+YA+PF ++PP VD+ KL RNILADKPRVTRFPIDW
Sbjct: 1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAQPLEADLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSDPPNPDMIPDEDKVGVTVALVTCSYRGREFVRVGYYVNNDYADPFLLENPPARVDVSKLQRNILADKPRVTRFPIDW 153 The following BLAST results are available for this feature:
BLAST of EWM27157.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|