EWM27157.1, cds3510 (CDS) Nannochloropsis gaditana

Overview
NameEWM27157.1
Unique Namecds3510
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:598686..598794 +
Alignment locationCM002461.1:599023..599651 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27157.1
Producthistone chaperone
Orig transcript idgnl|cribi|Naga_100010g77.6127.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:598686..598794 +
CM002461.1supercontigCM002461.1:599023..599651 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016043cellular component organization
GO:0006333chromatin assembly or disassembly
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR006818Histone_chaperone_ASF1-like
IPR017282Hist_deposition_Asf1
Homology
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|585109337|gb|EWM27157.1| (histone chaperone [Nannochloropsis gaditana])

HSP 1 Score: 488.804 bits (1257), Expect = 1.694e-174
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQDGEEEEGEEEEEEEEAEDDRELEGGEESEEGSVVQGDDAMAMELSSPVPRAQMREGTV 245
            MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQDGEEEEGEEEEEEEEAEDDRELEGGEESEEGSVVQGDDAMAMELSSPVPRAQMREGTV
Sbjct:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQDGEEEEGEEEEEEEEAEDDRELEGGEESEEGSVVQGDDAMAMELSSPVPRAQMREGTV 245          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|673049751|ref|XP_008878836.1| (hypothetical protein H310_13206 [Aphanomyces invadans] >gi|574465492|gb|ETV92529.1| hypothetical protein H310_13206 [Aphanomyces invadans])

HSP 1 Score: 243.047 bits (619), Expect = 1.757e-77
Identity = 117/187 (62.57%), Postives = 141/187 (75.40%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQ 187
            MA V LTNI VLDNPT+FTNPF FEVTFEC   LEDDLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  PD + IPEED +GVTV+L+TC+Y+ +EFVRVGYYVNN+Y +PF  ++PP  VD+ KL RNILADKPRVTRFPIDW    G  G     V +E   A  + + D L++++
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPDPNNIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLENPPAVVDIHKLQRNILADKPRVTRFPIDW--APGATGAGASAVFDENMNASDLNEMDMLNEEE 185          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|698815430|ref|XP_009840744.1| (hypothetical protein H257_14579 [Aphanomyces astaci] >gi|574104197|gb|ETV69730.1| hypothetical protein H257_14579 [Aphanomyces astaci])

HSP 1 Score: 240.35 bits (612), Expect = 2.022e-76
Identity = 117/187 (62.57%), Postives = 140/187 (74.87%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQVTEEEAAAEGVVDFDALDQQQ 187
            MA V LTNI VLDNPT+FTNPF FEVTFEC   LEDDLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  PD S IPEED +GVTV+L+TC+Y+ +EFVRVGYYVNN+Y +PF  ++PP  VD+ KL RNILADKPRVTRFPIDW    G  G       +E   A  + + D L++++
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPDSSIIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLENPPAIVDIHKLQRNILADKPRVTRFPIDW--APGATGAPATAEFDENMNASDLNEMDMLNEEE 185          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|325185710|emb|CCA20191.1| (histone chaperone ASF1like protein putative [Albugo laibachii Nc14])

HSP 1 Score: 236.113 bits (601), Expect = 9.591e-75
Identity = 113/167 (67.66%), Postives = 130/167 (77.84%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGMGVEGGQQQQV 167
            MA V LTNI VL NPT+FTNPF FEVTFEC   LEDDLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  P+   IP+ D IGVTV+L+TC+YR +EFVRVGYYVNN+YA+P   ++PP  VD+ KL RNILADKPRVTRFPIDW  G+G  GG    V
Sbjct:    1 MAFVTLTNITVLANPTAFTNPFQFEVTFECAHALEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPDMIPDCDKIGVTVVLLTCSYRSKEFVRVGYYVNNDYADPLMLENPPPTVDVSKLQRNILADKPRVTRFPIDWSSGLG--GGNMDCV 165          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|1173953740|gb|OQS01262.1| (histone chaperone ASF1-like protein [Achlya hypogyna])

HSP 1 Score: 235.728 bits (600), Expect = 1.184e-74
Identity = 109/154 (70.78%), Postives = 126/154 (81.82%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWG 154
            MA V LTNI VLDNPT+FTNPF FEVTFEC   LEDDLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  P+ + IP+ED IGVTV+L+TC+Y+ +EFVRVGYYVNN+Y +PF  + PP  VD+ KL RNILADKPRVTRFPIDW 
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPALIPDEDKIGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLEAPPATVDITKLQRNILADKPRVTRFPIDWA 154          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|1214713406|gb|OWZ24300.1| (Histone chaperone ASF1 [Phytophthora megakarya])

HSP 1 Score: 236.113 bits (601), Expect = 1.568e-74
Identity = 110/153 (71.90%), Postives = 127/153 (83.01%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDW 153
            MA V LTNI VLDNPT+FTNPF FEVTFEC Q LE DLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  P+   IP+ED +GVTV L+TC+YR +EFVRVGYYVNN+YA+PF  ++PP PVD+ KL RN+LADKPRVTRFPIDW
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAQPLEADLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSDPPNPDMIPDEDKVGVTVALVTCSYRGREFVRVGYYVNNDYADPFLLENPPAPVDVSKLQRNVLADKPRVTRFPIDW 153          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|669155068|ref|XP_008613096.1| (histone chaperone ASF1 [Saprolegnia diclina VS20] >gi|530735214|gb|EQC33456.1| histone chaperone ASF1 [Saprolegnia diclina VS20])

HSP 1 Score: 233.802 bits (595), Expect = 4.999e-74
Identity = 109/154 (70.78%), Postives = 126/154 (81.82%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWG 154
            MA V LTNI VLDNPT+FTNPF FEVTFEC   LEDDLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  P+ S IP+ED IGVTV+L+TC Y+ +EFVRVGYYVNN+Y++P   ++PP  VD+ KL RNILADKPRVTRFPIDW 
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPSLIPDEDKIGVTVVLVTCAYKGREFVRVGYYVNNDYSDPALIENPPASVDITKLARNILADKPRVTRFPIDWA 154          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|635366739|emb|CCI44975.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 233.802 bits (595), Expect = 8.853e-74
Identity = 126/234 (53.85%), Postives = 153/234 (65.38%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMGM-----------GVEGGQQQQVT-------EEEAAAEGVVDFDALDQQQDGEEEE---GEEEEEEEEAEDDRELEGGE 213
            MA V LTNI VL NPT+FTNPF FEVTFEC   LEDDLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  P+   IP+ D IGVTV+L+TC+YR +EFVRVGYYVNN+YA+P   ++PP  VD+ KL RNILADKPRVTRFPIDW  G+           G+  G    +        E+   A   +D D  D   DG+E       ++ E E  ++D +LEG E
Sbjct:    1 MAFVTLTNITVLANPTAFTNPFQFEVTFECAHALEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPEMIPDCDKIGVTVVLLTCSYRSKEFVRVGYYVNNDYADPLMLENPPSTVDVSKLQRNILADKPRVTRFPIDWSSGVPEDNMNCVDPTGISQGANSTIKLDAEFVDEDLLKAAAHLDSDYPDIVIDGDEGMDWLANDQLENEGDDEDIDLEGDE 234          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|301095792|ref|XP_002896995.1| (histone chaperone ASF1-like protein [Phytophthora infestans T30-4] >gi|262108424|gb|EEY66476.1| histone chaperone ASF1-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 233.802 bits (595), Expect = 1.400e-73
Identity = 110/153 (71.90%), Postives = 126/153 (82.35%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDW 153
            MA V LTNI VLDNPT+FTNPF FEVTFEC Q LE DLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  P+   IP+ED +GVTV L+TC+YR +EFVRVGYYVNN+YA+PF  ++PP  VD+ KL RNILADKPRVTRFPIDW
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAQPLEADLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSDPPNPDMIPDEDKVGVTVALVTCSYRGREFVRVGYYVNNDYADPFLLENPPARVDVSKLQRNILADKPRVTRFPIDW 153          
BLAST of EWM27157.1 vs. NCBI_GenBank
Match: gi|567959965|gb|ETK85529.1| (hypothetical protein L915_09679 [Phytophthora parasitica] >gi|567988695|gb|ETL38968.1| hypothetical protein L916_09583 [Phytophthora parasitica] >gi|568017912|gb|ETL92089.1| hypothetical protein L917_09508 [Phytophthora parasitica] >gi|568048332|gb|ETM45388.1| hypothetical protein L914_09547 [Phytophthora parasitica] >gi|570326273|gb|ETO74221.1| hypothetical protein F444_09975 [Phytophthora parasitica P1976] >gi|570950128|gb|ETP15385.1| hypothetical protein F441_09831 [Phytophthora parasitica CJ01A1] >gi|570983690|gb|ETP43472.1| hypothetical protein F442_09786 [Phytophthora parasitica P10297] >gi|970634179|gb|KUF79521.1| Histone chaperone ASF1 protein [Phytophthora nicotianae])

HSP 1 Score: 233.802 bits (595), Expect = 1.716e-73
Identity = 110/153 (71.90%), Postives = 126/153 (82.35%), Query Frame = 0
Query:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELEDDLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPFDPDHPPRPVDLLKLVRNILADKPRVTRFPIDW 153
            MA V LTNI VLDNPT+FTNPF FEVTFEC Q LE DLEWK+ YV SAE+  +DQVLEEV+VGPVPVG NKFV QS  P+   IP+ED +GVTV L+TC+YR +EFVRVGYYVNN+YA+PF  ++PP  VD+ KL RNILADKPRVTRFPIDW
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAQPLEADLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSDPPNPDMIPDEDKVGVTVALVTCSYRGREFVRVGYYVNNDYADPFLLENPPARVDVSKLQRNILADKPRVTRFPIDW 153          
The following BLAST results are available for this feature:
BLAST of EWM27157.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109337|gb|EWM27157.1|1.694e-174100.00histone chaperone [Nannochloropsis gaditana][more]
gi|673049751|ref|XP_008878836.1|1.757e-7762.57hypothetical protein H310_13206 [Aphanomyces invad... [more]
gi|698815430|ref|XP_009840744.1|2.022e-7662.57hypothetical protein H257_14579 [Aphanomyces astac... [more]
gi|325185710|emb|CCA20191.1|9.591e-7567.66histone chaperone ASF1like protein putative [Albug... [more]
gi|1173953740|gb|OQS01262.1|1.184e-7470.78histone chaperone ASF1-like protein [Achlya hypogy... [more]
gi|1214713406|gb|OWZ24300.1|1.568e-7471.90Histone chaperone ASF1 [Phytophthora megakarya][more]
gi|669155068|ref|XP_008613096.1|4.999e-7470.78histone chaperone ASF1 [Saprolegnia diclina VS20] ... [more]
gi|635366739|emb|CCI44975.1|8.853e-7453.85unnamed protein product [Albugo candida][more]
gi|301095792|ref|XP_002896995.1|1.400e-7371.90histone chaperone ASF1-like protein [Phytophthora ... [more]
gi|567959965|gb|ETK85529.1|1.716e-7371.90hypothetical protein L915_09679 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3519rna3519Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications