EWM30315.1, cds349 (CDS) Nannochloropsis gaditana

Overview
NameEWM30315.1
Unique Namecds349
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:857298..857479 +
Alignment locationCM002455.1:857599..857962 +

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Properties
Property NameValue
Protein idEWM30315.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g147.1832.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:857298..857479 +
CM002455.1supercontigCM002455.1:857599..857962 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30315.1 vs. NCBI_GenBank
Match: gi|585112974|gb|EWM30315.1| (hypothetical protein Naga_100003g147 [Nannochloropsis gaditana])

HSP 1 Score: 374.4 bits (960), Expect = 2.460e-131
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MRLDLLCCFFAPVLLSRGEAFLVTPPLEKLQHICSTASAILGSTTHPMANRKIQFSDNEDNTDRVTQVELRGDGSVSFISDSTNAVDVQGSWRPGDEGKVGFLLERFYSDSGDSKYSMTRIYEGTITISGTSIRGEGRIEMEKYNDLFTCGFFSLISVDDDPDDFFEKLKPGHTVMQGIDQ 181
            MRLDLLCCFFAPVLLSRGEAFLVTPPLEKLQHICSTASAILGSTTHPMANRKIQFSDNEDNTDRVTQVELRGDGSVSFISDSTNAVDVQGSWRPGDEGKVGFLLERFYSDSGDSKYSMTRIYEGTITISGTSIRGEGRIEMEKYNDLFTCGFFSLISVDDDPDDFFEKLKPGHTVMQGIDQ
Sbjct:    1 MRLDLLCCFFAPVLLSRGEAFLVTPPLEKLQHICSTASAILGSTTHPMANRKIQFSDNEDNTDRVTQVELRGDGSVSFISDSTNAVDVQGSWRPGDEGKVGFLLERFYSDSGDSKYSMTRIYEGTITISGTSIRGEGRIEMEKYNDLFTCGFFSLISVDDDPDDFFEKLKPGHTVMQGIDQ 181
The following BLAST results are available for this feature:
BLAST of EWM30315.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112974|gb|EWM30315.1|2.460e-131100.00hypothetical protein Naga_100003g147 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna349rna349Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications