EWM27188.1, cds3483 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|585109368|gb|EWM27188.1| (hypothetical protein Naga_100010g47 [Nannochloropsis gaditana]) HSP 1 Score: 477.633 bits (1228), Expect = 1.079e-170 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
Query: 1 MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMDVISDASSSSPSSGTRTS 230
MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMDVISDASSSSPSSGTRTS
Sbjct: 1 MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMDVISDASSSSPSSGTRTS 230
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|585109367|gb|EWM27187.1| (hypothetical protein Naga_100010g47 [Nannochloropsis gaditana]) HSP 1 Score: 325.479 bits (833), Expect = 1.429e-111 Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 1 MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSI 158
MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFS+
Sbjct: 1 MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSM 158
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|585109369|gb|EWM27189.1| (hypothetical protein Naga_100010g47 [Nannochloropsis gaditana]) HSP 1 Score: 250.751 bits (639), Expect = 1.034e-81 Identity = 126/155 (81.29%), Postives = 134/155 (86.45%), Query Frame = 0
Query: 1 MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGK-AFGVVLNNFQAKVKFSAEHVGSAAA 154
MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGG + + + K A G + N A +++ H+ S A
Sbjct: 1 MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGREYMLPLCTNKIAQGRI--NVIAAIEYMKRHMDSCEA 153
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|219121535|ref|XP_002181120.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407106|gb|EEC47043.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 70.4774 bits (171), Expect = 2.778e-11 Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 0
Query: 39 VPWTRIRE----FKEEQER----KKRHKVESG--QEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKERLL----FGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQ-AKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMD 213
+PW RI + +E++ER +R +E Q+ S++ V+ E Q T+ K Y LL FGG +G++TGA FG +D G++ + V+ N AK ++ + +A +F +F+ + +KY KV D G A ++ L A+R N+PYA++L+ MD
Sbjct: 10 IPWDRIPQTGTNLEEQKERIFRELQRETIEDEFLQQDRHSEQPVVTGE-----QSTDSAKPFTSNKVPYSNMELLRQAAFGGCLGTITGAVFGFMD---GMRTAQESSVLQNASNVAKGRYLMQGTTRSATLFGVFFGGFHILKYGLKVTLDPGDVGEIGVAGAASVGTLFARPAWRPNIPYALMLVAMD 191
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|813171532|ref|XP_012204521.1| (hypothetical protein SPRG_20819 [Saprolegnia parasitica CBS 223.65] >gi|813225714|ref|XP_012211934.1| hypothetical protein SPRG_17212 [Saprolegnia parasitica CBS 223.65] >gi|641521956|gb|KDO17363.1| hypothetical protein SPRG_17212 [Saprolegnia parasitica CBS 223.65] >gi|641530670|gb|KDO24782.1| hypothetical protein SPRG_20819 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 68.5514 bits (166), Expect = 6.504e-11 Identity = 45/125 (36.00%), Postives = 64/125 (51.20%), Query Frame = 0
Query: 93 FKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMDVISD 217
F T + +L+FGG+VG TG FG +DAV+ + +G + N QA S G +FS F+ SYQGIK + R D+ N AAL + P + R N YA LL+G+D+ +
Sbjct: 30 FDYTTLRHKLVFGGLVGLSTGLTFGSVDAVR--QAHTQYGRI--NAQAMRSIS-RTAGICGMLFSGFFFSYQGIKNTMEQLRGAEDFANVGVAALLSGAPFIRHPVMRTNAMYAALLVGLDLFHE 149
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|669151334|ref|XP_008611229.1| (hypothetical protein SDRG_07187 [Saprolegnia diclina VS20] >gi|530737237|gb|EQC35479.1| hypothetical protein SDRG_07187 [Saprolegnia diclina VS20]) HSP 1 Score: 67.781 bits (164), Expect = 1.012e-10 Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query: 93 FKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMDVISD 217
F T + +L+FGG+VG TG FG +DAV+ + +G + N QA ++ + G +FS F+ SYQGIK + R D+ N AAL + P + R N YA LL+G+D+ +
Sbjct: 28 FNYTTLRHKLVFGGLVGLSTGLTFGSVDAVR--QAHTQYGRI--NAQA-IRSISRTAGICGMLFSGFFFSYQGIKTTMEQLRGAEDFANVGVAALLSGAPFIRHPVMRTNAMYAALLVGLDLFHE 147
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|1072230409|gb|OEU15142.1| (hypothetical protein FRACYDRAFT_269232 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 66.6254 bits (161), Expect = 8.503e-10 Identity = 48/177 (27.12%), Postives = 83/177 (46.89%), Query Frame = 0
Query: 44 IREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQETE-------ENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMD 213
IR+ + E +RK++ + + S D + + Q + +F ++ G FK L FGG +GS+TG+ FG +D ++ + + N AK K+ E +A +F +F+ + +KY +VA D+ A ++ L+ + FR VPYA +LI MD
Sbjct: 32 IRDLQREADRKEKSQALEQHRLNSSSSDTIGLSSNEQTSSLSSTSTSMMQTNFSFQW-GELFKN-LAFGGCIGSITGSVFGFMDGMRMAGQSEVLKNASN--VAKGKYLMEGTTRSATMFGVFFGGFHVVKYGVRVAFDPGDYPEIGLAGAISLGGLMYNPNFRPAVPYATMLIFMD 204
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|325186013|emb|CCA20516.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 64.3142 bits (155), Expect = 1.832e-9 Identity = 40/115 (34.78%), Postives = 60/115 (52.17%), Query Frame = 0
Query: 100 ERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARS-ECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMD 213
RLLFG +VG TGA FG +D ++ +K N AK +A + G FS F+S++QG+K + R+ D N A P L + FR+N+PYA++L+ +D
Sbjct: 44 NRLLFGALVGFPTGAVFGAIDGIRTFQKCGKLSFHATNAIAK---TAVYTGGC---FSSFFSTFQGVKAAVEFNRNGRQDAINIGVATTAATIPFLKVSYFRKNIPYAMMLVALD 152
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|673036214|ref|XP_008872068.1| (hypothetical protein H310_08185 [Aphanomyces invadans] >gi|673036216|ref|XP_008872069.1| hypothetical protein, variant [Aphanomyces invadans] >gi|574472507|gb|ETV99512.1| hypothetical protein H310_08185 [Aphanomyces invadans] >gi|574472508|gb|ETV99513.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 61.2326 bits (147), Expect = 2.993e-8 Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 0
Query: 93 FKGTYFKERLLFGGVVGSVTGAFFGGLDAVQG--IKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMDVISD 217
F + ++LFGG+VGS TGA FG + A Q K G N +A + +A G+ A+F F+ +YQG+K + R E D+ N A P + FR ++ YA LLI +D +
Sbjct: 38 FNMELLRNKVLFGGLVGSTTGATFGFVGAFQSHHTKHGSV------NSKALLG-AARTAGTTGAVFGAFFLAYQGVKTTIEQLRGEEDFLNAGAAVAIAGLPFYRTITFRSHMGYAGLLIALDYFHE 157
BLAST of EWM27188.1 vs. NCBI_GenBank
Match: gi|698801118|ref|XP_009833588.1| (hypothetical protein H257_09159 [Aphanomyces astaci] >gi|574111180|gb|ETV76676.1| hypothetical protein H257_09159 [Aphanomyces astaci]) HSP 1 Score: 60.077 bits (144), Expect = 7.108e-8 Identity = 40/122 (32.79%), Postives = 61/122 (50.00%), Query Frame = 0
Query: 98 FKERLLFGGVVGSVTGAFFGGLDAVQG--IKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMDVISD 217
+ +++FGG+VGS TGA FG + A Q K G N QA + +A G+ A+F F+ +YQG+K + R + D+ N A P + FR ++ YA LL+ +D D
Sbjct: 41 LRNKVIFGGLVGSTTGATFGFVGAFQNHHTKHGSV------NSQALLG-AARTAGTTGAVFGAFFLAYQGLKTTIEQLRGDEDFLNAGAAVAVAGLPFYRTITFRSHMGYAGLLVALDYFHD 155 The following BLAST results are available for this feature:
BLAST of EWM27188.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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