EWM27199.1, cds3476 (CDS) Nannochloropsis gaditana

Overview
NameEWM27199.1
Unique Namecds3476
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:526618..528297 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27199.1
ProductProtein of unknown function DUF647
Orig transcript idgnl|cribi|Naga_100010g39.6169.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:526618..528297 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR006968RUS_fam
Homology
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|585109379|gb|EWM27199.1| (Protein of unknown function DUF647 [Nannochloropsis gaditana])

HSP 1 Score: 1153.66 bits (2983), Expect = 0.000e+0
Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 0
Query:    1 MMDKRLTFPWLLPVILAVMTADATTDAFLSHLPSHKGDPSMSMVNVADVALISESRSGSNDGNFFISYGMEQNGRLIPLPVPHSPTLSRPSDASRVSTPHYDSRANRYSSIMWVIRKQSEVRSIVRNAKRRLKTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVNVFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGWIYHKIIE 559
            MMDKRLTFPWLLPVILAVMTADATTDAFLSHLPSHKGDPSMSMVNVADVALISESRSGSNDGNFFISYGMEQNGRLIPLPVPHSPTLSRPSDASRVSTPHYDSRANRYSSIMWVIRKQSEVRSIVRNAKRRLKTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVNVFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGWIYHKIIE
Sbjct:    1 MMDKRLTFPWLLPVILAVMTADATTDAFLSHLPSHKGDPSMSMVNVADVALISESRSGSNDGNFFISYGMEQNGRLIPLPVPHSPTLSRPSDASRVSTPHYDSRANRYSSIMWVIRKQSEVRSIVRNAKRRLKTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVNVFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGWIYHKIIE 559          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|553196685|ref|XP_005856399.1| (hypothetical protein NGA_2057300, partial [Nannochloropsis gaditana CCMP526] >gi|422292654|gb|EKU19956.1| hypothetical protein NGA_2057300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
Query:    1 MMDKRLTFPWLLPVILAVMTADATTDAFLSHLPSHKGDPSMSMVNVADVALISESRSGSNDGNFFISYGMEQNGRLIPLPVPHSPTLSRPSDASRVSTPHYDSRANRYSSIMWVIRKQSEVRSIVRNAKRRLKTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGA 272
            MMDKRLTFPWLLPVILAVMTADATTDAFLSHLPSHKGDPSMSMVNVADVALISESRSGSNDGNFFISYGMEQNGRLIPLPVPHSPTLSRPSDASRVSTPHYDSRANRYSSIMWVIRKQSEVRSIVRNAKRRLKTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGA
Sbjct:    3 MMDKRLTFPWLLPVILAVMTADATTDAFLSHLPSHKGDPSMSMVNVADVALISESRSGSNDGNFFISYGMEQNGRLIPLPVPHSPTLSRPSDASRVSTPHYDSRANRYSSIMWVIRKQSEVRSIVRNAKRRLKTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGA 274          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|553196681|ref|XP_005856398.1| (hypothetical protein NGA_2040500, partial [Nannochloropsis gaditana CCMP526] >gi|422292653|gb|EKU19955.1| hypothetical protein NGA_2040500, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 369.777 bits (948), Expect = 1.403e-123
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query:  267 GIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQY 447
            GIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQY
Sbjct:    1 GIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQY 181          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|970641271|gb|KUF83452.1| (hypothetical protein AM587_10010379 [Phytophthora nicotianae])

HSP 1 Score: 263.848 bits (673), Expect = 2.647e-78
Identity = 151/425 (35.53%), Postives = 231/425 (54.35%), Query Frame = 0
Query:  136 LHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAE--LAKDAHAPIW-NIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVN-----VFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGW 552
            L  +FLP G+P SV+ +YL +Q W+ +Q + +YLRG+LATQ++L+ VGVG + ATPLAA LQW+ RDG+ M+ GL F  F+   F VN K WRLFAD + D+G+TLDM+AP FP      +C++SVCK++CG+AAGA+  +++ H A+ +N+A+  AK G+Q TAV LFGL FGM+FA   N SPR VW A+ +LT++H+ AN+ A+  L   ++N  R  +L+  F    SV  P     +E +    GR+              R    E  + KD   P+  ++ +G  +      +  L  L +++  E Y+L +V      +F  E   +   R    AV + +    L L+            G  ++K +           ++ STY+++   FP  +Q L+  GW     LL+   W
Sbjct:   75 LQEMFLPAGYPDSVSEDYLSFQFWDTLQAMCSYLRGVLATQSVLQSVGVGDDKATPLAAALQWVLRDGSGMIGGLTFAYFVGPKFDVNVKRWRLFADVINDVGLTLDMVAPYFPTLVTEVLCVSSVCKTMCGVAAGATRSSLMTHFAKRDNMADCAAKEGSQETAVKLFGLLFGMYFANAVNSSPRAVWVAFLVLTLVHVYANFNAVSCLCIPTVNCSRGLILVQRFL--TSVNKPG----KENVADHHGRY------------SIRSVNQEEPIFKDPVLPVTSDLVMGSELHQAVPTSTDLDRLLQIYEDETYLLTVVGDHVHVIFQAEAKPKDELRAFFQAVLVLQ---ALALVPPXASPPPSTSDG--SIKHQP----------LLESTYRKMTSDFPLFLQVLQNSGWRTHMFLLNTSTW 466          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|675210263|ref|XP_008914016.1| (hypothetical protein PPTG_17893 [Phytophthora parasitica INRA-310] >gi|566010452|gb|ETI33363.1| hypothetical protein F443_19951 [Phytophthora parasitica P1569] >gi|567976604|gb|ETL27125.1| hypothetical protein L916_19303 [Phytophthora parasitica] >gi|568006076|gb|ETL80349.1| hypothetical protein L917_19169 [Phytophthora parasitica] >gi|568035964|gb|ETM33587.1| hypothetical protein L914_19212 [Phytophthora parasitica] >gi|568085793|gb|ETN00695.1| hypothetical protein PPTG_17893 [Phytophthora parasitica INRA-310] >gi|570314172|gb|ETO62120.1| hypothetical protein F444_19943 [Phytophthora parasitica P1976] >gi|570968257|gb|ETP31376.1| hypothetical protein F442_19759 [Phytophthora parasitica P10297])

HSP 1 Score: 263.848 bits (673), Expect = 2.647e-78
Identity = 151/425 (35.53%), Postives = 231/425 (54.35%), Query Frame = 0
Query:  136 LHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAE--LAKDAHAPIW-NIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVN-----VFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGW 552
            L  +FLP G+P SV+ +YL +Q W+ +Q + +YLRG+LATQ++L+ VGVG + ATPLAA LQW+ RDG+ M+ GL F  F+   F VN K WRLFAD + D+G+TLDM+AP FP      +C++SVCK++CG+AAGA+  +++ H A+ +N+A+  AK G+Q TAV LFGL FGM+FA   N SPR VW A+ +LT++H+ AN+ A+  L   ++N  R  +L+  F    SV  P     +E +    GR+              R    E  + KD   P+  ++ +G  +      +  L  L +++  E Y+L +V      +F  E   +   R    AV + +    L L+            G  ++K +           ++ STY+++   FP  +Q L+  GW     LL+   W
Sbjct:   75 LQEMFLPAGYPDSVSEDYLSFQFWDTLQAMCSYLRGVLATQSVLQSVGVGDDKATPLAAALQWVLRDGSGMIGGLTFAYFVGPKFDVNVKRWRLFADVINDVGLTLDMVAPYFPTLVTEVLCVSSVCKTMCGVAAGATRSSLMTHFAKRDNMADCAAKEGSQETAVKLFGLLFGMYFANAVNSSPRAVWVAFLVLTLVHVYANFNAVSCLCIPTVNCSRGLILVQRFL--TSVNKPG----KENVADHHGRY------------SIRSVNQEEPIFKDPVLPVTSDLVMGSELHQAVPTSTDLDRLLQIYEDETYLLTVVGDHVHVIFQAEAKPKDELRAFFQAVLVLQ---ALALVPPTASPPPSTSDG--SIKHQP----------LLESTYRKMTSDFPLFLQVLQNSGWRTHMFLLNTSTW 466          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|567947907|gb|ETK73676.1| (hypothetical protein L915_19438 [Phytophthora parasitica])

HSP 1 Score: 263.462 bits (672), Expect = 3.525e-78
Identity = 149/425 (35.06%), Postives = 228/425 (53.65%), Query Frame = 0
Query:  136 LHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAE--LAKDAHAPIW-NIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVN-----VFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGW 552
            L  +FLP G+P SV+ +YL +Q W+ +Q + +YLRG+LATQ++L+ VGVG + ATPLAA LQW+ RDG+ M+ GL F  F+   F VN K WRLFAD + D+G+TLDM+AP FP      +C++SVCK++CG+AAGA+  +++ H A+ +N+A+  AK G+Q TAV LFGL FGM+FA   N SPR VW A+ +LT++H+ AN+ A+  L   ++N  R  +L+  F    SV  P     +E +    GR+              R    E  + KD   P+  ++ +G  +      +  L  L +++  E Y+L +V      +F  E   +   R                  +A L    +A     A +    ++       ++ STY+++   FP  +Q L+  GW     LL+   W
Sbjct:   75 LQEMFLPAGYPDSVSEDYLSFQFWDTLQAMCSYLRGVLATQSVLQSVGVGDDKATPLAAALQWVLRDGSGMIGGLTFAYFVGPKFDVNVKRWRLFADVINDVGLTLDMVAPYFPTLVTEVLCVSSVCKTMCGVAAGATRSSLMTHFAKRDNMADCAAKEGSQETAVKLFGLLFGMYFANAVNSSPRAVWVAFLVLTLVHVYANFNAVSCLCIPTVNCSRGLILVQRFL--TSVNKPG----KENVADHHGRY------------SIRSVNQEEPIFKDPVLPVTSDLVMGSELHQAVPTSTDLDRLLQIYEDETYLLTVVGDHVHVIFQAEAKPKDELR---------------AFFQAVLVLQALALVPPTASQPPSTSDGSIKHQPLLESTYRKMTSDFPLFLQVLQNSGWRTHMFLLNTSTW 466          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|570937949|gb|ETP03206.1| (hypothetical protein F441_19811 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 263.462 bits (672), Expect = 3.562e-78
Identity = 149/425 (35.06%), Postives = 228/425 (53.65%), Query Frame = 0
Query:  136 LHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAE--LAKDAHAPIW-NIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVN-----VFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGW 552
            L  +FLP G+P SV+ +YL +Q W+ +Q + +YLRG+LATQ++L+ VGVG + ATPLAA LQW+ RDG+ M+ GL F  F+   F VN K WRLFAD + D+G+TLDM+AP FP      +C++SVCK++CG+AAGA+  +++ H A+ +N+A+  AK G+Q TAV LFGL FGM+FA   N SPR VW A+ +LT++H+ AN+ A+  L   ++N  R  +L+  F    SV  P     +E +    GR+              R    E  + KD   P+  ++ +G  +      +  L  L +++  E Y+L +V      +F  E   +   R                  +A L    +A     A +    ++       ++ STY+++   FP  +Q L+  GW     LL+   W
Sbjct:   75 LQEMFLPAGYPDSVSEDYLSFQFWDTLQAMCSYLRGVLATQSVLQSVGVGDDKATPLAAALQWVLRDGSGMIGGLTFAYFVGPKFDVNVKRWRLFADVINDVGLTLDMVAPYFPTLVTEVLCVSSVCKTMCGVAAGATRSSLMTHFAKRDNMADCAAKEGSQETAVKLFGLLFGMYFANAVNSSPRAVWVAFLVLTLVHVYANFNAVSCLCIPTVNCSRGLILVQRFL--TSVNKPG----KENVADHHGRY------------SIRSVNQEEPIFKDPVLPVTSDLVMGSELHQAVPTSTDLDRLLQIYEDETYLLTVVGDHVHVIFQAEAKPKDELR---------------AFFQAVLVLQALALVPPTASQPPSTSDGSIKHQPLLESTYRKMTSDFPLFLQVLQNSGWRTHMFLLNTSTW 466          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|1204932814|ref|XP_021299683.1| (protein root UVB sensitive 3 [Herrania umbratica])

HSP 1 Score: 262.307 bits (669), Expect = 3.826e-78
Identity = 148/422 (35.07%), Postives = 230/422 (54.50%), Query Frame = 0
Query:  140 FLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLT--RFAEGLTELQRLFSQEQYMLNMVNVFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGWIYHKIIE 559
            F+P GFP SV P+Y+ +Q W+ +Q LSTY+R +L+TQA+L  +GVG + AT + AT QW  RD   M+ G++FT +  +N   NAK WRL AD M D+G+ +D+L+PLFP  FL  +CL S+ +S  G+A+GA+   + +H A  NN A++ AK G+Q T  ++ G+  GM  AR+  ++P  +W ++  LT+ H+ ANY A+R LA  S+N  R ++LL  F E   VLSP +V+  E ++          LWT L           L+K A      ++LG+RV  L   + A  L      + + +Y L              V RK  I+V   +D+T   +LK+ +HA ++A      +  +K + ++E      S ++ +  + + N VQ L+  GW  +R+L     W  H  IE
Sbjct:   55 FVPEGFPGSVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATIIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFLFIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETMATMIGMALGMLVARITTENPLAIWFSFLSLTMFHMYANYKAVRCLALDSLNFERSSILLQHFIETGQVLSPKQVSTMEHVL---------PLWTTL----------RLSKSAKFLHTRVKLGLRVSSLDHPKMANLLNSAGSFYKKAKYFL--------------VERKGIISVITHKDSTAADILKSYIHALVMAN-----LMDEKRSLHLE------SQSWMD--KQYENFVQKLKSSGWKTQRLLSPSIIWKAHWYIE 430          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|1028958510|ref|XP_016722709.1| (PREDICTED: protein root UVB sensitive 3-like isoform X2 [Gossypium hirsutum])

HSP 1 Score: 260.766 bits (665), Expect = 9.015e-78
Identity = 143/418 (34.21%), Postives = 228/418 (54.55%), Query Frame = 0
Query:  140 FLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVK--DLTRFAEGLTELQRLFSQEQYMLNMVNVFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGWIYH 555
            F+P GFP SV P+Y+ +Q W+ +Q LSTY+R +L+TQA+L  +GVG + AT + AT QW  RD   M+ G++FT +  +N   NAK WRL AD M D+G+ +D+L+PLFP  F+  +CL S+ +S  G+A+GA+   + +H A  NN A++ AK G+Q T  ++ G+  GM  AR+  ++P  +W ++  LT+ H+ ANY A+R L+  S+N  R ++LL  F E+  VLSP EV+  E ++          LWT L           L+K A     N++LG+RV   D +  A  LT     +++ +Y+L              V RK  ++V + +D+T   +LK+ +HA ++       V    G +++ +           + + + + VQ L+  GW   R+L     W  H
Sbjct:   38 FVPEGFPGSVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATIIGATFQWFLRDLTGMLGGILFTLYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFIFIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADIAAKEGSQETMATMIGMALGMLLARITTENPVAIWFSFLSLTMFHMYANYKAVRCLSLDSLNFERSSILLQHFIESGQVLSPKEVSTMEHVL---------PLWTTL----------RLSKSAKPLHTNVKLGLRVSTLDHSEMANFLTSAGSFYNEAKYLL--------------VERKGTVSVVVHKDSTAEDILKSYIHALVV-------VNLTVGQKSLHL------ECQSWMDKHYESFVQKLKLAGWKAGRLLSHSIIWKAH 409          
BLAST of EWM27199.1 vs. NCBI_GenBank
Match: gi|301096265|ref|XP_002897230.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107315|gb|EEY65367.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 262.307 bits (669), Expect = 9.556e-78
Identity = 148/426 (34.74%), Postives = 230/426 (53.99%), Query Frame = 0
Query:  136 LHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAE--LAKDAHAPIW-NIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVN-----VFDGEL-PTRKVTRKIQIAVALREDATNLTLLKACLHADLIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGW 552
            L  +FLP G+P SV+ +YL +Q W+ +Q + +YLRG+LATQ++L+ VGVG + ATPLAA LQW+ RDG+ M+ GL F  F+   F VN K WRLFAD + D+G+TLDM+AP FP      +C++SVCK++CG+AAGA+  +++ H A+ +N+A+  AK G+Q TAV LFGL FGM+FA   N SP  VW A+ +LT++H+ ANY A+  L   ++N  R  +L+  F      L       +E +    GR+              R    E  + KD   P+  ++ +G  +      +  L  L +++  E Y+L +V      +F+ E  PT ++    Q  + L+  A+             +           +G+   +    ++ STY+++   FP  +Q L+  GW     LL+   W
Sbjct:   75 LQEMFLPAGYPDSVSEDYLGFQFWDTLQAMCSYLRGVLATQSVLQSVGVGDDKATPLAAALQWVLRDGSGMIGGLTFAYFVGPKFDVNVKRWRLFADVVNDVGLTLDMVAPYFPTLVTEVLCVSSVCKAMCGVAAGATRSSLMTHFAKRDNMADCAAKEGSQETAVKLFGLMFGMYFANAVNSSPHAVWMAFLVLTLVHVYANYNAVSCLCIPTVNCSRGLILVQRF------LMSGNKPGKENVADHQGRY------------SIRSVNQEEPIFKDPVLPVTSHLMMGSELHQAVPTSTDLDRLLQIYEDETYLLTVVGDRVHVMFEAEAKPTDELRAFFQAVLVLQALAS-------------VPPTTSTPSSSNEGSTKHQ---PLLESTYRKMTSDFPLFLQVLQNSGWRTHMFLLNTSTW 466          
The following BLAST results are available for this feature:
BLAST of EWM27199.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109379|gb|EWM27199.1|0.000e+0100.00Protein of unknown function DUF647 [Nannochloropsi... [more]
gi|553196685|ref|XP_005856399.1|0.000e+0100.00hypothetical protein NGA_2057300, partial [Nannoch... [more]
gi|553196681|ref|XP_005856398.1|1.403e-123100.00hypothetical protein NGA_2040500, partial [Nannoch... [more]
gi|970641271|gb|KUF83452.1|2.647e-7835.53hypothetical protein AM587_10010379 [Phytophthora ... [more]
gi|675210263|ref|XP_008914016.1|2.647e-7835.53hypothetical protein PPTG_17893 [Phytophthora para... [more]
gi|567947907|gb|ETK73676.1|3.525e-7835.06hypothetical protein L915_19438 [Phytophthora para... [more]
gi|570937949|gb|ETP03206.1|3.562e-7835.06hypothetical protein F441_19811 [Phytophthora para... [more]
gi|1204932814|ref|XP_021299683.1|3.826e-7835.07protein root UVB sensitive 3 [Herrania umbratica][more]
gi|1028958510|ref|XP_016722709.1|9.015e-7834.21PREDICTED: protein root UVB sensitive 3-like isofo... [more]
gi|301096265|ref|XP_002897230.1|9.556e-7834.74conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3485rna3485Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications