EWM27196.1, cds3474 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|585109376|gb|EWM27196.1| (nudix hydrolase 13 [Nannochloropsis gaditana]) HSP 1 Score: 477.248 bits (1227), Expect = 2.357e-170 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query: 1 MLVARPVSTTPRMGRQLQRYNGNVRLITGCIPLTSDGNVVLISSRTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEECHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAALLSIKLQGLNTLFTGEESQEEDSRREGHLELHGAGSHHPNGSDSIPDQPLFSSEASDGCDSAEFPGLILSTRRPGLERGKTDRDVELIGKVES 235
MLVARPVSTTPRMGRQLQRYNGNVRLITGCIPLTSDGNVVLISSRTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEECHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAALLSIKLQGLNTLFTGEESQEEDSRREGHLELHGAGSHHPNGSDSIPDQPLFSSEASDGCDSAEFPGLILSTRRPGLERGKTDRDVELIGKVES
Sbjct: 1 MLVARPVSTTPRMGRQLQRYNGNVRLITGCIPLTSDGNVVLISSRTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEECHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAALLSIKLQGLNTLFTGEESQEEDSRREGHLELHGAGSHHPNGSDSIPDQPLFSSEASDGCDSAEFPGLILSTRRPGLERGKTDRDVELIGKVES 235
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|1191647003|gb|OTF98976.1| (putative NUDIX hydrolase domain-like protein [Helianthus annuus]) HSP 1 Score: 112.849 bits (281), Expect = 3.574e-27 Identity = 63/151 (41.72%), Postives = 85/151 (56.29%), Query Frame = 0
Query: 8 STTPRMGRQLQRYNGNVRLITGCIP--LTSDGN-----VVLISS-RTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEE-------CHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAAL 143
S R GR LQRY+ N+RL++GCIP LT + V+++SS D + PKGGWE DET EAA RE EE GV G++ E +R+K +E C +FV+EV+E L WPE + R R+ ++ EA +C E R AL
Sbjct: 3 SIVARTGRHLQRYDNNLRLVSGCIPFRLTKPKDQDKIEVLMVSSPNRDDMVFPKGGWESDETVEEAACREALEEAGVRGVIKGNSLGEWEFRSKSKQEACSEEGGCKGYMFVLEVTEELETWPEQNNRNRKWVTIEEAFVVCRYEWMRNAL 153
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|694325052|ref|XP_009353496.1| (PREDICTED: nudix hydrolase 12, mitochondrial-like isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 111.694 bits (278), Expect = 9.090e-27 Identity = 77/198 (38.89%), Postives = 105/198 (53.03%), Query Frame = 0
Query: 10 TPRMGRQLQRYNGNVRLITGCIPL---TSDGN------VVLISSRT-GDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEE-------CHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAALLSIKLQGLNTLFTGEESQEEDSRRE-GHLELHG---AGSHHPNGSDS 186
T R GRQ QRY+G++RL++GCIP SDG+ V++ISS + D + PKGGWE DET EAA RE EE GV G++ P YR+K ++ C +F MEV+E L WPE + R+ ++ EA C + R A L+ T + E++E D+R+E L L GS HP S S
Sbjct: 5 TARTGRQRQRYDGHLRLVSGCIPYRFEKSDGSIEQKLLVLMISSPSRDDLVFPKGGWEDDETMSEAACREALEEAGVKGVLGDNPLGAWEYRSKSKQKSCSLQGGCKGFMFAMEVTEELDSWPEQANYGRKWLTIEEAFRSCRYDWMREA-----LRKFATALS--ETRENDTRKELDELPLRPISEIGSEHPMSSSS 195
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|299472983|emb|CBN77384.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 108.997 bits (271), Expect = 2.678e-26 Identity = 54/106 (50.94%), Postives = 71/106 (66.98%), Query Frame = 0
Query: 12 RMGRQLQRYNGNVRLITGCIPLTSDGNVVLISS-RTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEECHLLLFVMEVSELLPQWPE 116
R GR+ RY+G+ RL+ GC+P+T DG +VLI S + DWILPKGGW+ DETA EAA RE YEE GV GLV A+ + RG + +F + VS++L +WPE
Sbjct: 5 RQGREKCRYDGDTRLVAGCLPVTPDGRLVLIGSVKHTDWILPKGGWDTDETAAEAAVREAYEEAGVKGLVTAD-LGPHEIVSSRGNKSRAAMFALLVSDVLDEWPE 109
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|694423450|ref|XP_009339526.1| (PREDICTED: nudix hydrolase 12, mitochondrial-like [Pyrus x bretschneideri]) HSP 1 Score: 110.538 bits (275), Expect = 2.933e-26 Identity = 76/198 (38.38%), Postives = 104/198 (52.53%), Query Frame = 0
Query: 10 TPRMGRQLQRYNGNVRLITGCIPL---TSDGN------VVLISSRT-GDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEE-------CHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAALLSIKLQGLNTLFTGEESQEEDSRRE-GHLELH---GAGSHHPNGSDS 186
T R GRQ QRY+G++RL++GCIP SDG+ V++ISS + D + PKGGWE DET EAA RE EE GV G++ P +R+K ++ C +F MEV+E L WPE + + ++ EA C + R A LQ T + E++E D+R+E L L GS HP S S
Sbjct: 5 TARTGRQRQRYDGHLRLVSGCIPYRFEKSDGSIEQKLLVLMISSPSRDDLVFPKGGWEDDETMSEAACREALEEAGVKGVLGDNPLGAWEFRSKSKQKSCSLQGGCKGFMFAMEVTEELDSWPEQANYVSKWLTIEEAFRSCRYDWMREA-----LQKFATALS--ETRENDTRKELDELPLRPISEIGSEHPMSSSS 195
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|694359521|ref|XP_009359855.1| (PREDICTED: nudix hydrolase 12, mitochondrial-like [Pyrus x bretschneideri]) HSP 1 Score: 109.768 bits (273), Expect = 1.038e-25 Identity = 76/205 (37.07%), Postives = 103/205 (50.24%), Query Frame = 0
Query: 10 TPRMGRQLQRYNGNVRLITGCIPLT-------SDGN------VVLISS-RTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEE-------CHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAALLSIKLQGLNTLFTGEESQEEDSRREGHLE------LHGAGSHHPNGSDSI 187
T R GRQ QRY+G++RL++GCIP +GN V++ISS D + PKGGWE DET REAA RE EE GV G++ P +R+K + C +F MEV+E L WPE + R+ ++ EA C + R AL + L T ES+E ++R E LE + GS HP S +
Sbjct: 5 TARTGRQRQRYDGHLRLVSGCIPYKFEKIAGGCNGNIEQKLLVLMISSPNRDDLVFPKGGWEDDETMREAACREALEEAGVKGVLRDNPLGVWEFRSKSKQNSCNLQGGCKGFMFAMEVTEELDSWPEQANYGRKWLTVEEAFRFCRYDWMREALGKL-------LTTLSESRENNTRNE--LEELPLRPISEIGSEHPMSSSPV 200
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|727153851|emb|CEG64821.1| (hypothetical protein RMATCC62417_01730 [Rhizopus microsporus] >gi|1178067331|gb|ORE21735.1| hypothetical protein BCV71DRAFT_274378 [Rhizopus microsporus]) HSP 1 Score: 106.686 bits (265), Expect = 2.014e-25 Identity = 59/142 (41.55%), Postives = 80/142 (56.34%), Query Frame = 0
Query: 9 TTPRMGRQLQRYNGN-VRLITGCIPLTSDGNVVLI---SSRTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEECHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDIC-GKEEHRAALLS 145
T PR+GRQ Q Y+ N +R I+G I + N VLI S W+LPKGGWE DET EAA RETYEEGGV G+V + Y + H+ + +EV + +WPE R+R+ C+ EA+ + K + ALL+
Sbjct: 8 TEPRVGRQNQVYDHNDIRQISGSIAVDPKTNKVLIISSSKYENVWVLPKGGWENDETREEAAKRETYEEGGVKGVVKGFVGNFVDYDYMGNPKSHVWFYELEVQHIYERWPEEDFRQRKWCTFEEAMQLLRFKPYMQKALLA 149
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|669163502|ref|XP_008617313.1| (hypothetical protein SDRG_13008 [Saprolegnia diclina VS20] >gi|530731097|gb|EQC29339.1| hypothetical protein SDRG_13008 [Saprolegnia diclina VS20]) HSP 1 Score: 106.301 bits (264), Expect = 3.084e-25 Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 0
Query: 1 MLVARPVSTTPRMGRQLQRYNGNVRLITGCIPLTSDGNVVLI--SSRTGD-WILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEECHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAALL 144
M VA + T R GR LQRY+G+ RL+ +PL+ DG VL+ SS+ D WILPKGGW+ DE+A AARE EE GVHG + E Y +G+ C L F M V+ +W E+ RRR SL+ A + A++L
Sbjct: 1 MAVADRCTMTSRTGRDLQRYDGHARLVVCAVPLSLDGARVLLISSSKHADQWILPKGGWDADESAEACAARELAEEAGVHGDILGE-LGAVDYETAKGKPCRLHGFGMRVTREFEEWSEAVSRRREWVSLATATARLARRPELASML 146
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|1191668915|gb|OTG20882.1| (putative nudix hydrolase [Helianthus annuus]) HSP 1 Score: 108.612 bits (270), Expect = 3.295e-25 Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 0
Query: 8 STTPRMGRQLQRYNGNVRLITGCIPL----TSDGN---VVLISS-RTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEE-------CHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAAL 143
S R GR LQRY+ N+RL++GCIP T D N V+++SS D + PKGGWE DET EAA RE EE GV G++ +R+K +E C +F ++V+E L WPE + R R+ + EA +C E R AL
Sbjct: 3 SIVARTGRHLQRYDNNLRLVSGCIPYRLDKTKDENRIEVLMVSSPNRDDMVFPKGGWESDETVEEAACREALEEAGVRGILDGNALGVWEFRSKSKQEACSEEGGCKGYMFALQVTEELETWPEKNNRNRKWVVIEEAFVLCRYEWMRNAL 153
BLAST of EWM27196.1 vs. NCBI_GenBank
Match: gi|1032648524|gb|OAQ29817.1| (hypothetical protein K457DRAFT_111667 [Mortierella elongata AG-77]) HSP 1 Score: 105.531 bits (262), Expect = 4.538e-25 Identity = 61/142 (42.96%), Postives = 77/142 (54.23%), Query Frame = 0
Query: 8 STTPRMGRQLQRYNGNVRLITGCIPLTSDGNVVLI---SSRTGDWILPKGGWERDETAREAAARETYEEGGVHG--LVHAEPFSETSYRNKRGE-ECHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAAL 143
S + GRQ Q Y+ RL+ GC+P+ G VL+ S G+W+LPKGGWE DET EAAARET+EE G G + H + E Y K G E + F MEV + +WPE R RR + EA I K+ R AL
Sbjct: 3 SQYAKEGRQNQLYDEGARLVAGCVPIDKHGRRVLLVASSKNEGEWVLPKGGWENDETQEEAAARETWEEAGAIGRIVAHLGEY-EHKYNKKTGHAESIFIFFEMEVERIEEKWPEMKKRERRWFTYEEAKQIVSKKVMRKAL 143 The following BLAST results are available for this feature:
BLAST of EWM27196.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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