EWM27227.1, cds3473 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|585109407|gb|EWM27227.1| (tubby-like protein [Nannochloropsis gaditana]) HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
Query: 1 MATQHLASASGELEGLVQSTVNLFGGVADKLWPAKSRNQEKQAEIGKVGALNSEAFDSNFKKDIKTFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQARRSNNAELKTRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333
MATQHLASASGELEGLVQSTVNLFGGVADKLWPAKSRNQEKQAEIGKVGALNSEAFDSNFKKDIKTFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQARRSNNAELKTRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV
Sbjct: 1 MATQHLASASGELEGLVQSTVNLFGGVADKLWPAKSRNQEKQAEIGKVGALNSEAFDSNFKKDIKTFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQARRSNNAELKTRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|585109408|gb|EWM27228.1| (tubby-like protein [Nannochloropsis gaditana]) HSP 1 Score: 479.945 bits (1234), Expect = 9.387e-170 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query: 1 MATQHLASASGELEGLVQSTVNLFGGVADKLWPAKSRNQEKQAEIGKVGALNSEAFDSNFKKDIKTFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVW 231
MATQHLASASGELEGLVQSTVNLFGGVADKLWPAKSRNQEKQAEIGKVGALNSEAFDSNFKKDIKTFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVW
Sbjct: 1 MATQHLASASGELEGLVQSTVNLFGGVADKLWPAKSRNQEKQAEIGKVGALNSEAFDSNFKKDIKTFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVW 231
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|675203397|ref|XP_008910583.1| (hypothetical protein PPTG_15284 [Phytophthora parasitica INRA-310] >gi|566016662|gb|ETI39573.1| hypothetical protein F443_14842 [Phytophthora parasitica P1569] >gi|567954100|gb|ETK79741.1| hypothetical protein L915_14421 [Phytophthora parasitica] >gi|567982756|gb|ETL33165.1| hypothetical protein L916_14324 [Phytophthora parasitica] >gi|568012262|gb|ETL86440.1| hypothetical protein L917_14125 [Phytophthora parasitica] >gi|568042242|gb|ETM39585.1| hypothetical protein L914_14271 [Phytophthora parasitica] >gi|568089261|gb|ETN04108.1| hypothetical protein PPTG_15284 [Phytophthora parasitica INRA-310] >gi|570320364|gb|ETO68312.1| hypothetical protein F444_14837 [Phytophthora parasitica P1976] >gi|570944197|gb|ETP09454.1| hypothetical protein F441_14676 [Phytophthora parasitica CJ01A1] >gi|570975468|gb|ETP37510.1| hypothetical protein F442_14684 [Phytophthora parasitica P10297] >gi|970648944|gb|KUF88345.1| king tubby 1 protein [Phytophthora nicotianae] >gi|970651473|gb|KUF90284.1| king tubby 1 protein [Phytophthora nicotianae]) HSP 1 Score: 219.164 bits (557), Expect = 5.500e-65 Identity = 130/338 (38.46%), Postives = 186/338 (55.03%), Query Frame = 0
Query: 47 KVGALNSEAFDSNFKKDIK--TFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGV-PEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHS--------FDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQA--------RRSNNAELKT----RHFRLH---------------NKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICL-------------DGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333
K G SE + I+ F+D+D+LESGHAREY+ EECL P K W+ V + K+ ++MY + Q F+LSAK++G +F+ISQYE+FP++ + P CAVLR ++ FKL+ GCE CD+ + +TC + H +RQLLA+I+H K ++MRC SV +P + ED+++R VWCPR+ +A R + A L T R+ R H +KLP W + SL+L+F+ GR+ SAKNF++ L D N V+QFGK K ++ALDFR P++P+QAF I LS WNV
Sbjct: 53 KDGTPTSEVTSPTWGNTIRKEPFQDMDMLESGHAREYLAEECLSPT-QAKAWTYSTVERTNKNQYKMYWNNDQ--FLLSAKQIGGTFYISQYENFPDTEDAEEPTGHYCAVLRKATDNNFKLYSCGCEGCDQSFNTFTCSNTHEDATAAAVEGADRQLLADISHFTKAAGVVGSEMRCFSVIIPAIMEDKRSRVVWCPRVSRAVTSSGGTPRGTPRARLLTSPSPRNKRQHIFTFDTPTSDRIKIGSKLPVWCPEVNSLMLKFHGGRIREASAKNFMLMLEEESAGTLASPVPDPTGNNRVVMQFGKFSKSKFALDFRFPLAPIQAFAIGLSSCAWNV 387
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|553196696|ref|XP_005856402.1| (tubby-like protein [Nannochloropsis gaditana CCMP526] >gi|422292657|gb|EKU19959.1| tubby-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 209.149 bits (531), Expect = 5.900e-65 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
Query: 235 MEQARRSNNAELKTRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333
MEQARRSNNAELKTRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV
Sbjct: 1 MEQARRSNNAELKTRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 99
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|325188436|emb|CCA22972.1| (cleavage induced conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 218.394 bits (555), Expect = 1.271e-64 Identity = 121/321 (37.69%), Postives = 176/321 (54.83%), Query Frame = 0
Query: 67 FEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPES--INGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGS-------GHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQA--------------------------RRSNNAELKTRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLD---------------------GQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNW 331
F+D+D+LESGHAREYI EECL P + W+ V + K+ FRMY + Q F+LSAK++G SF+ISQYE FPE+ + +P + CAVLR SE FKL+ GCE CD + ++C + H +RQLLA+I H K EA ++MRC SV +P + ED+++R +WCPR+ ++ R +L R+ +KLP W + SL+L+F+ GR+ S+KNF++ LD D + ++QFGK K +++LDFR+P++P+QAF I LS W
Sbjct: 69 FQDMDMLESGHAREYIAEECLSPTQS-NTWTYTRVERKDKTEFRMYWNSDQ--FLLSAKQIGGSFYISQYEHFPEAQAPDSIPTENYCAVLRQVSESNFKLYSCGCEGCDMSFNTFSCCNTNESAVLSHEGADRQLLADITHHTKLAGEAGSEMRCFSVVIPAIMEDKRSRVIWCPRLSRSVTPSRGTPRNVLARELVTSPSPHNKQNRFTFEDLTGDRIRIESKLPVWCSQVNSLMLKFHGGRIREASSKNFMLMLDEDSKSKKDKLHKFSALERCEVDTDVQQVLMQFGKYSKSKFSLDFRYPLAPIQAFAIGLSSCAW 386
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|698819471|ref|XP_009842764.1| (hypothetical protein H257_16129 [Aphanomyces astaci] >gi|574102217|gb|ETV67771.1| hypothetical protein H257_16129 [Aphanomyces astaci]) HSP 1 Score: 217.624 bits (553), Expect = 2.136e-64 Identity = 123/310 (39.68%), Postives = 178/310 (57.42%), Query Frame = 0
Query: 67 FEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESI----NGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFD-------------NRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQA--------RRSNNAELKTR------------------HFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333
F+D+DLLESG+AREYITE+ L P + K W+ V + K+ ++M+ + Q F+LSAK+ F+ISQYE F ES + VP CAVL+ ++ FKL+ GCE CD+ KYTC + H +RQLLA+I+H K V +++MRCLSV +P V ED ++R +WCPRM ++ R S EL T +L +KLP W + SL+++F+ GR+ SAKNF++ LD D+ + V QFGK K +++LDFR+P++P+QAF I LS +W+
Sbjct: 73 FQDMDLLESGNAREYITEDSLSPT-SAKSWTYSTVHRINKTQYKMFWNNDQ--FLLSAKQHNGMFYISQYEHFGESSADSSSAVPTSHYCAVLKRTTDNSFKLYNCGCEGCDQGFSKYTCSNDHETSSNFGFTEEAGEGADRQLLADISHFTKVVSGISSEMRCLSVVIPAVMEDSRSRVIWCPRMCRSDTPSGGTPRTSAKTELVTSPSPHGKKTKFTFETPVSDRVKLVSKLPSWCSEVNSLIMKFHGGRIREASAKNFMLVLD-DDDDKAVFQFGKFSKSKFSLDFRYPLAPIQAFAIGLSSCSWSA 378
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|1214709749|gb|OWZ20901.1| (hypothetical protein PHMEG_0004629 [Phytophthora megakarya]) HSP 1 Score: 217.624 bits (553), Expect = 2.293e-64 Identity = 122/315 (38.73%), Postives = 178/315 (56.51%), Query Frame = 0
Query: 67 FEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGV-PEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTC------GSGHSFD--NRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQARRSNNAELK---------------------------TRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQD------------NGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333
F+D+D+LESGHAREY+ EECL P K W+ V ++ K+ ++MY + Q F+LSAK+VG +F+ISQYE+FPES G P CAVLR ++ FKL+ GCE CD+ YTC + + + +RQLLA+I+H K ++MRC SV +P + ED+++R VWCPR+ ++ S+ + + ++ +KLP W + SL+L+F+ GR+ SAKNF++ LD + N V+QFGK K ++ALDFR P++P+QAF I LS WNV
Sbjct: 77 FQDMDMLESGHAREYLAEECLSPT-QAKSWTYSTVERSNKNQYKMYWNNDQ--FLLSAKQVGGTFYISQYENFPESGEGEEPMGHYCAVLRKATDHNFKLYSCGCEGCDQSFSTYTCHNVSEDATAEAVEGADRQLLADISHFTKAAGVVGSEMRCFSVIIPAIMEDKRSRVVWCPRVSRSITSSGGTPRGITRTKLMTSPSPRNKFQHIFTFDTPTSDRIKIGSKLPVWCPEVNSLMLKFHGGRIREASAKNFMLMLDEEPAGTISPVPDPTGNNRVVMQFGKFSKSKFALDFRFPLAPIQAFAIGLSSCAWNV 388
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|635370243|emb|CCI41541.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 217.238 bits (552), Expect = 3.522e-64 Identity = 125/335 (37.31%), Postives = 188/335 (56.12%), Query Frame = 0
Query: 53 SEAFDSNFKKDIKTFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPES--INGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTC-GSGHSFD------NRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQA--------RRSNNAELKTR------------------HFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQ---------------------DNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNW 331
SE++ ++ K++ F+D+D+LESGHAREY+ EECL P + W+ V + K+ FRMY + Q F+LSAK++G SF+ISQYE FPE+ N +P + CAVLR S+ FKL+ GCE CD + ++C + S D +RQLLA+I H K E ++MRC SV +P + ED+++R +WCPR+ ++ R + EL T R+ +KLP W + SL+L+F+ GR+ S+KNF++ LD + D + ++QFGK K +++LDFR+P++P+QAF I LS W
Sbjct: 57 SESWGNSVKRE--KFQDMDMLESGHAREYLAEECLSPTQS-NNWTYTRVERKDKTEFRMYWNSDQ--FLLSAKKIGGSFYISQYEHFPEAQASNTIPTENYCAVLRQVSDNNFKLYSCGCEGCDMSFNTFSCCNTNESADLSPEGADRQLLADITHHTKLAGEVGSEMRCFSVIIPAIMEDKRSRVIWCPRISRSVTPSQGTPRSALTRELLTSPSPRNKQNRFTFDDPTVDRIRIESKLPVWCSQVNSLMLKFHGGRIREASSKNFMLMLDEESIPKKDKVPKSRALDRCEVDTDAQQVLMQFGKYSKSKFSLDFRYPLAPIQAFAIGLSSCAW 386
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|301092917|ref|XP_002997309.1| (cleavage induced conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110871|gb|EEY68923.1| cleavage induced conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 215.698 bits (548), Expect = 1.262e-63 Identity = 123/341 (36.07%), Postives = 186/341 (54.55%), Query Frame = 0
Query: 44 EIGKVGALNSEAFDSNFKKDI--KTFEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGV-PEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHS--------FDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRME--------------QARRSNNAELKTRH-------------FRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICL-------------DGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333
++ K G +E + I + F+D+D+LESGHAREY+ EECL P K W+ V + K+ ++MY + Q F+LSAK++G +F+ISQYE+FPE+ + P CAV+R ++ FKL+ GCE CD+ + +TC + H +RQLLA+I+H K ++MRC SV +P + +D+++R VWCPR+ +AR + + +H ++ +KLP W + SL+L+F+ GR+ SAKNF++ L D N V+QFGK K ++ALDFR P++P+QAF I LS WNV
Sbjct: 51 DVKKDGTPTTEVTSPTWGNTIHKEPFQDMDMLESGHAREYLAEECLSPT-QAKAWTYSTVERTNKNQYKMYWNNDQ--FLLSAKQIGGTFYISQYENFPETEDAEEPTGHYCAVVRKATDHNFKLYSCGCEGCDQSFNTFTCSNIHEDATAAAVEGADRQLLADISHFTKAAGVVGSEMRCFSVVIPAIMDDKRSRVVWCPRVSRSVTTSGGTPRGTPKARLLTSPSPRNKHQHIFTFDTPTSDRIKIGSKLPVWCPEVNSLMLKFHGGRIREASAKNFMLMLEEEPAGTLASPVPDPTGNNRVVMQFGKFSKSKFALDFRFPLAPIQAFAIGLSSCAWNV 388
BLAST of EWM27227.1 vs. NCBI_GenBank
Match: gi|673050707|ref|XP_008879314.1| (hypothetical protein H310_13543 [Aphanomyces invadans] >gi|574464975|gb|ETV92017.1| hypothetical protein H310_13543 [Aphanomyces invadans]) HSP 1 Score: 214.542 bits (545), Expect = 3.369e-63 Identity = 124/312 (39.74%), Postives = 179/312 (57.37%), Query Frame = 0
Query: 67 FEDLDLLESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESIN------GVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGH----SFD---------NRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQA--------RRSNNAELKTR------------------HFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICLDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333
F+D+DLLESG+AREYITEE L P + K W+ V + K+ ++M+ + Q F+LSAK+ F+ISQYE F ES VP CAVL+ ++ FKL+ GCE CD+ KYTC + H +F +RQLLA+I+H K V +++MRCLSV +P V ED ++R +WCPRM ++ R S EL T +L +KLP W + SL+++F+ GR+ SAKNF++ +D D+ + V QFGK K +++LDFR+P++P+QAF I LS +W+
Sbjct: 71 FQDMDLLESGNAREYITEESLSPT-SAKAWTYSTVHRINKTQYKMFWNNDQ--FLLSAKQHNGIFYISQYEHFGESSGDTSSSGAVPTSHYCAVLKRTTDNSFKLYNCGCEGCDQGFSKYTCSNDHENASNFGFTEDAGEGADRQLLADISHFTKVVSGISSEMRCLSVVIPAVMEDSRSRVIWCPRMCRSDTPSGGTPRTSVKTELVTSPSPHGKKTKFTFETPVSDRVKLVSKLPSWCSEVNSLIMKFHGGRIREASAKNFMLVMD-DDDDKAVFQFGKFSKSKFSLDFRYPLAPIQAFAIGLSSCSWSA 378 The following BLAST results are available for this feature:
BLAST of EWM27227.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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