EWM30212.1, cds347 (CDS) Nannochloropsis gaditana

Overview
NameEWM30212.1
Unique Namecds347
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:854253..855031 -
Alignment locationCM002455.1:854101..854200 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30212.1
Productinosine triphosphate pyrophosphatase
Orig transcript idgnl|cribi|Naga_100003g149.1729.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:854253..855031 -
CM002455.1supercontigCM002455.1:854101..854200 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029001ITPase-like_fam
IPR002637Ham1p-like
Homology
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|585112871|gb|EWM30212.1| (inosine triphosphate pyrophosphatase [Nannochloropsis gaditana])

HSP 1 Score: 609.372 bits (1570), Expect = 0.000e+0
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query:    1 MNRHILVRTVIFLCLIHLLNSFCPVSLHRESIYSVRFKFRSIWGVYISPPFARHRSWNPFHKTVVSSTSNNAINSKHGSKCQAVTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQEKPYFSNLVARVHMKKKRRRIPMPLHCS 292
            MNRHILVRTVIFLCLIHLLNSFCPVSLHRESIYSVRFKFRSIWGVYISPPFARHRSWNPFHKTVVSSTSNNAINSKHGSKCQAVTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQEKPYFSNLVARVHMKKKRRRIPMPLHCS
Sbjct:    1 MNRHILVRTVIFLCLIHLLNSFCPVSLHRESIYSVRFKFRSIWGVYISPPFARHRSWNPFHKTVVSSTSNNAINSKHGSKCQAVTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQEKPYFSNLVARVHMKKKRRRIPMPLHCS 292          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|1126218735|ref|XP_019643477.1| (PREDICTED: inosine triphosphate pyrophosphatase-like [Branchiostoma belcheri])

HSP 1 Score: 182.956 bits (463), Expect = 1.569e-53
Identity = 92/202 (45.54%), Postives = 123/202 (60.89%), Query Frame = 0
Query:   60 FHKTVVSSTSNNAINSKHGSKCQAVTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPG-PGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHR 260
            FH      +    +     S   A     + F+T N  K  EV+ +L  G    P+++V   ++LPE Q  P  I+  K R AA+ +QGP +VEDTCLCF+ALG LPGPYIK FL+++GPEGL+RM+  +ED SA A+C + FSPG P  + L+F GI  G+IV P  G   FGWD CF P GF  T+ +MT E+K+ ISHR
Sbjct:    2 FHSRAAILSGQRLLGHLRSSAGMAANSRRIVFVTGNAKKLEEVKQILGTG---FPYEVVAKKVDLPEYQGEPDDISRAKAREAAKQIQGPCVVEDTCLCFNALGGLPGPYIKWFLEKIGPEGLYRMLTGWEDKSAYAMCTMAFSPGNPQDEVLLFKGIAPGKIVDP-RGSRDFGWDPCFQPEGFEKTYGEMTKEEKHEISHR 199          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|260810975|ref|XP_002600198.1| (hypothetical protein BRAFLDRAFT_276410 [Branchiostoma floridae] >gi|229285484|gb|EEN56210.1| hypothetical protein BRAFLDRAFT_276410 [Branchiostoma floridae])

HSP 1 Score: 178.718 bits (452), Expect = 2.863e-52
Identity = 89/179 (49.72%), Postives = 117/179 (65.36%), Query Frame = 0
Query:   83 AVTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPG-PGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHR 260
            A     + F+T N  K  EV+ +L  G    P+++V   ++LPE Q  P  I+  K R AA+ +QGP +VEDTCLCF+ALG LPGPYIK FL++LGPEGL+RM+  +ED SA A+C + FSPG P    L+F GI+ G+IV P  G   FGWD CF P GF  T+ +M  E+K+ ISHR
Sbjct:    2 AANSRRIVFVTGNAKKLEEVKQILGAG---FPYEVVAKKVDLPEYQGEPDDISRAKAREAAKQIQGPCVVEDTCLCFNALGGLPGPYIKWFLEKLGPEGLYRMLTGWEDKSAYAMCTMAFSPGNPQDDVLLFKGISPGKIVDP-RGSRDFGWDPCFQPDGFEKTYGEMAKEEKHEISHR 176          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|923913359|ref|XP_013726341.1| (PREDICTED: inosine triphosphate pyrophosphatase-like [Brassica napus])

HSP 1 Score: 176.407 bits (446), Expect = 3.907e-51
Identity = 99/203 (48.77%), Postives = 124/203 (61.08%), Query Frame = 0
Query:   78 GSKCQAVTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQEKPYFSNLVARVHMKK 280
             +K   V    V F+T N  K  EV+A++   G  +PF  + LD  LPELQ  P  I+ EK RLAA  V GPVLVEDTCLCF+AL  LPGPYIK FL++LG EGL  ++  YED SA A+C   FS GPG +PL F G T G+IV P  G   FGWD  F P G++ T+++M  E+KN ISHR       Y S  + + H K+
Sbjct:    3 AAKAAVVLPRPVTFVTGNAKKLEEVKAII---GSSIPFKSLKLD--LPELQGEPEDISKEKARLAALQVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKLGHEGLNNLLMAYEDKSAYALCAFSFSHGPGAEPLTFLGKTPGKIV-PARGPTDFGWDPVFQPDGYDQTYAEMAKEEKNKISHR-------YKSLAMVKSHFKE 192          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|922466851|ref|XP_013633738.1| (PREDICTED: inosine triphosphate pyrophosphatase [Brassica oleracea var. oleracea])

HSP 1 Score: 176.022 bits (445), Expect = 4.361e-51
Identity = 99/203 (48.77%), Postives = 124/203 (61.08%), Query Frame = 0
Query:   78 GSKCQAVTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQEKPYFSNLVARVHMKK 280
             +K   V    V F+T N  K  EV+A++   G  +PF  + LD  LPELQ  P  I+ EK RLAA  V GPVLVEDTCLCF+AL  LPGPYIK FL++LG EGL  ++  YED SA A+C   FS GPG +PL F G T G+IV P  G   FGWD  F P G++ T+++M  E+KN ISHR       Y S  + + H K+
Sbjct:    2 AAKAAVVLPRPVTFVTGNAKKLEEVKAII---GSSIPFKSLKLD--LPELQGEPEDISKEKARLAALQVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKLGHEGLNNLLMAYEDKSAYALCAFSFSHGPGAEPLTFLGKTPGKIV-PARGPTDFGWDPVFQPDGYDQTYAEMAKEEKNKISHR-------YKSLAMVKSHFKE 191          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|1072939811|ref|XP_018480449.1| (PREDICTED: inosine triphosphate pyrophosphatase [Raphanus sativus])

HSP 1 Score: 175.637 bits (444), Expect = 6.153e-51
Identity = 99/203 (48.77%), Postives = 124/203 (61.08%), Query Frame = 0
Query:   78 GSKCQAVTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQEKPYFSNLVARVHMKK 280
             +K   V    V F+T N  K  EV+A++   G  +PF  + LD  LPELQ  P  I+ EK RLAA  V GPVLVEDTCLCF+AL  LPGPYIK FL++LG EGL  ++  YED SA A+C   FS GPG +PL F G T G+IV P  G   FGWD  F P G++ T+++M  E+KN ISHR       Y S  + + H K+
Sbjct:    3 AAKAAVVLPRPVTFVTGNAKKFEEVKAII---GSSIPFKSLKLD--LPELQGEPEDISKEKARLAALQVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKLGHEGLNNLLMAYEDKSAYALCAFSFSHGPGAEPLTFLGKTPGKIV-PARGPTDFGWDPVFQPDGYDQTYAEMAKEEKNKISHR-------YKSLAMVKSHFKE 192          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|1191070171|ref|XP_020913729.1| (inosine triphosphate pyrophosphatase-like [Exaiptasia pallida])

HSP 1 Score: 175.252 bits (443), Expect = 9.830e-51
Identity = 90/205 (43.90%), Postives = 131/205 (63.90%), Query Frame = 0
Query:   84 VTRLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPL-IFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQE--KPYFSNLVARVHMKKKRRRI 285
            ++R  + F+T N  K +EV ++L E     P+ +    I+LPE Q     I+IEK ++A + +QGPV+VEDTCLCF+ALG LPGPY+K FL ++GPEGLFRM+  +ED SA A+C   +  G   +P+ +F G T G+IV P +G   FGWD CF P GF+ T+++M  E KN+ISHR    +  K YF N+   +  + K+ ++
Sbjct:    1 MSRKTLVFVTGNQNKLKEVISILGE---SFPWKVEARSIDLPEFQGESDEISIEKCKVAFEKIQGPVIVEDTCLCFNALGGLPGPYVKWFLKKIGPEGLFRMLTGWEDKSAYALCTFAYCSGIKDEPVELFRGKTSGKIVEP-KGPRNFGWDPCFKPDGFDQTYAEMPSEVKNSISHRGKALQALKDYFMNIDNDIQNENKKAKM 201          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|567222466|ref|XP_006414862.1| (hypothetical protein EUTSA_v10026260mg [Eutrema salsugineum] >gi|557116032|gb|ESQ56315.1| hypothetical protein EUTSA_v10026260mg [Eutrema salsugineum])

HSP 1 Score: 174.866 bits (442), Expect = 1.338e-50
Identity = 93/172 (54.07%), Postives = 114/172 (66.28%), Query Frame = 0
Query:   89 VKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHR 260
            V F+T N  K  EV+A++   G  +PF  + LD  LPELQ  P  I+ EK RLAA  V GPVLVEDTCLCF+AL  LPGPYIK FL++LG EGL  ++  YED SA A+C   FS GPG +PL F G T G+IV P  G   FGWD  F P G++ T+++M  E+KN ISHR
Sbjct:   15 VTFVTGNAKKLEEVKAII---GNSIPFKSLKLD--LPELQGEPEDISKEKARLAALQVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKLGHEGLNNLLMAYEDKSAYALCAFSFSHGPGAEPLTFLGKTPGKIV-PARGPTDFGWDPVFQPDGYDQTYAEMAKEEKNKISHR 180          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|923906246|ref|XP_013723135.1| (PREDICTED: inosine triphosphate pyrophosphatase [Brassica napus])

HSP 1 Score: 174.866 bits (442), Expect = 1.488e-50
Identity = 97/192 (50.52%), Postives = 121/192 (63.02%), Query Frame = 0
Query:   89 VKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQEKPYFSNLVARVHMKK 280
            V F+T N  K  EV+A++   G  +PF  + LD  LPELQ  P  I+ EK RLAA  V GPVLVEDTCLCF+AL  LPGPYIK FL++LG EGL  ++  YED SA A+C   FS GPG +PL F G T G+IV P  G   FGWD  F P G++ T+++M  E+KN ISHR       Y S  + + H K+
Sbjct:   16 VTFVTGNAKKLEEVKAII---GSSIPFKSLKLD--LPELQGEPEDISKEKARLAALQVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKLGHEGLNNLLMAYEDKSAYALCAFSFSHGPGAEPLTFLGKTPGKIV-PARGPTDFGWDPVFQPDGYDQTYAEMAKEEKNKISHR-------YKSLAMVKSHFKE 194          
BLAST of EWM30212.1 vs. NCBI_GenBank
Match: gi|685297620|ref|XP_009139600.1| (PREDICTED: inosine triphosphate pyrophosphatase [Brassica rapa])

HSP 1 Score: 174.866 bits (442), Expect = 1.534e-50
Identity = 97/192 (50.52%), Postives = 121/192 (63.02%), Query Frame = 0
Query:   89 VKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHREAKQEKPYFSNLVARVHMKK 280
            V F+T N  K  EV+A++   G  +PF  + LD  LPELQ  P  I+ EK RLAA  V GPVLVEDTCLCF+AL  LPGPYIK FL++LG EGL  ++  YED SA A+C   FS GPG +PL F G T G+IV P  G   FGWD  F P G++ T+++M  E+KN ISHR       Y S  + + H K+
Sbjct:   17 VTFVTGNAKKLEEVKAII---GSSIPFKSLKLD--LPELQGEPEDISKEKARLAALQVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKLGHEGLNNLLMAYEDKSAYALCAFSFSHGPGAEPLTFLGKTPGKIV-PARGPTDFGWDPVFQPDGYDQTYAEMAKEEKNKISHR-------YKSLAMVKSHFKE 195          
The following BLAST results are available for this feature:
BLAST of EWM30212.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112871|gb|EWM30212.1|0.000e+0100.00inosine triphosphate pyrophosphatase [Nannochlorop... [more]
gi|1126218735|ref|XP_019643477.1|1.569e-5345.54PREDICTED: inosine triphosphate pyrophosphatase-li... [more]
gi|260810975|ref|XP_002600198.1|2.863e-5249.72hypothetical protein BRAFLDRAFT_276410 [Branchiost... [more]
gi|923913359|ref|XP_013726341.1|3.907e-5148.77PREDICTED: inosine triphosphate pyrophosphatase-li... [more]
gi|922466851|ref|XP_013633738.1|4.361e-5148.77PREDICTED: inosine triphosphate pyrophosphatase [B... [more]
gi|1072939811|ref|XP_018480449.1|6.153e-5148.77PREDICTED: inosine triphosphate pyrophosphatase [R... [more]
gi|1191070171|ref|XP_020913729.1|9.830e-5143.90inosine triphosphate pyrophosphatase-like [Exaipta... [more]
gi|567222466|ref|XP_006414862.1|1.338e-5054.07hypothetical protein EUTSA_v10026260mg [Eutrema sa... [more]
gi|923906246|ref|XP_013723135.1|1.488e-5050.52PREDICTED: inosine triphosphate pyrophosphatase [B... [more]
gi|685297620|ref|XP_009139600.1|1.534e-5050.52PREDICTED: inosine triphosphate pyrophosphatase [B... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna347rna347Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications