EWM27148.1, cds3464 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|585109328|gb|EWM27148.1| (protein of unknown function DUF1995 [Nannochloropsis gaditana]) HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query: 1 MTRVSLRQSALVVSLYLLLGTYAFTVPPLNQVSQSSRSHRRRICPSYMIANFLGGGGEPQGIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVEGPGAGSADDDKYEKSDRELARLTVELFKPIIDNTVVIFSQGRQARRAASIWGTALVKTMALDEMTSSAIKRKNKKAKKGGGFGASEGGGEMTTLPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSEFEPVFFLNVLNDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEEKLIALREGAENNAKPLLEKLTSSLWGSG 337
MTRVSLRQSALVVSLYLLLGTYAFTVPPLNQVSQSSRSHRRRICPSYMIANFLGGGGEPQGIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVEGPGAGSADDDKYEKSDRELARLTVELFKPIIDNTVVIFSQGRQARRAASIWGTALVKTMALDEMTSSAIKRKNKKAKKGGGFGASEGGGEMTTLPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSEFEPVFFLNVLNDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEEKLIALREGAENNAKPLLEKLTSSLWGSG
Sbjct: 1 MTRVSLRQSALVVSLYLLLGTYAFTVPPLNQVSQSSRSHRRRICPSYMIANFLGGGGEPQGIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVEGPGAGSADDDKYEKSDRELARLTVELFKPIIDNTVVIFSQGRQARRAASIWGTALVKTMALDEMTSSAIKRKNKKAKKGGGFGASEGGGEMTTLPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSEFEPVFFLNVLNDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEEKLIALREGAENNAKPLLEKLTSSLWGSG 337
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|224008072|ref|XP_002292995.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971121|gb|EED89456.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 147.132 bits (370), Expect = 2.353e-37 Identity = 110/314 (35.03%), Postives = 158/314 (50.32%), Query Frame = 0
Query: 38 SHRRRICPSYMIANFLGGG--GEPQGIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVEGP--------------GAGSADDD------KYEKSDRELARLTVELFKPIIDNTVV-IFSQGRQARRAASIWGTAL---VKTMALDEMTSSA----IKRKNK---KAKKGGGFGASEGGGEMT--------TLPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSEFEPVFFLNVLNDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKP-ERFTKEE 309
S +R S I N GGG EPQ +P+ +KD I+ R A+Q+ L +R SR ++ +P G GVEG G S D D K E S+RELARL VE+F+P+ + +F+ A +A +W L K +A+D + +K NK K KK GF AS+ EM +LP GTEV + VAPGPKEL A+ R+ +G T +I+LN L + ++ +FE ++ L A + L++R+YPG+W +A+K +G PK +ASK ERF+ EE
Sbjct: 43 SPSQRATTSLHIGNVFGGGDSNEPQ-LPKDVKDAISKCRGAVQKGLENRISRMDVEMPVGANFGVEGKKSKNNKRGNLSSLTGDESEDADVALTLEKLETSNRELARLFVEMFQPLGGEAIAAVFNDEYLADQARQLWSNDLSAECKIVAIDRKGKKSRGGLLKTGNKSMQKKKKAMGF-ASKIAAEMEDESNSGPFSLPKGTEVAVFVAPGPKELIAIERICNQVGMGTCIILLNARLSLVEKYSSEEAEKLFTQDFETIWSLGA---APQEDAPGCLMHRAYPGDWVLARKPKVGAPKTIASKKGERFSGEE 351
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|1210517646|dbj|GAX23561.1| (hypothetical protein FisN_14Hh261 [Fistulifera solaris]) HSP 1 Score: 141.354 bits (355), Expect = 5.114e-36 Identity = 100/280 (35.71%), Postives = 149/280 (53.21%), Query Frame = 0
Query: 48 MIANFLGGGGEPQ--GIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVEGPGA---GSADDDKYEKSDRELARLTVELFKPII-DNTVVIFSQGRQARRAASIW---GTALVKTMALDEMTSSAIKRKNKKAKKGGGFG---ASEGGGEMTT----LPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSE-FEPVFFLNVL-NDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEE 309
MIAN +P+ +K+ ++ R A Q AL++R SR +I P GT VE G +++SDRELARL V++F+P+ D VIF QA++A ++W +A + +AL+ +K + AKK GF A+E E ++ LP EV + V+PGPKEL V ++ + +G TL+++LNT L S + A L ++ FE VF L DAA N LL+R+YP +W +A+K A+GPPK + +R T EE
Sbjct: 1 MIANLFSTDNNKNLPSLPKDVKEAVSKCREATQEALKNRISRMDIEFPVGTKFNVEKSATKSKGPPSLQDFQRSDRELARLFVDMFQPVGGDRIAVIFKDDDQAKQAKNLWKGDASAASRILALNR------GKKQRTAKKSLGFANKLAAELEEEKSSGPFSLPENIEVALFVSPGPKELVVVEKICDQVGDGTLVVLLNTRLASIS-NFGSTAATKLFTQTFESVFHLAAAPQDAA----PNCLLHRAYPKDWVLARKPAVGPPKSMGRWSQRPTLEE 269
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|219116869|ref|XP_002179229.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409120|gb|EEC49052.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 140.969 bits (354), Expect = 1.940e-35 Identity = 105/292 (35.96%), Postives = 154/292 (52.74%), Query Frame = 0
Query: 41 RRICPSYMIANFLGG---GGEPQGIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVE-GPGAGSADD----DKYEKSDRELARLTVELFKPII-DNTVVIFSQGRQARRAASIW---GTALVKTMALDEMTSSAIKRKNKKAKKGGGFGASEGGGEMTT-----LPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSEFEPVFFLNV-LNDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEEKLIAL 314
R+ M+ NF GG G + +PR +K+ + R A Q AL++R SR +I P G +E G +A + D+ ++SDRELARL V++F+P+ D V+F+ A +A W TA+ ++LD S A K+K K +K A+E GEM LP TEV + VAPGPKEL V ++ + +G +TL+++LN L S A L +FE VF L DAA LLYR+YPG W +A+K A+G PK + + E+ T ++ +A
Sbjct: 37 RKTTAQLMVGNFGGGNEKGAKLSTLPRDVKEAVKSCREATQEALKNRISRMDIEFPVGAKFNIEKGEARRNAGETPTKDELDRSDRELARLFVDMFQPVGGDRIAVVFADVSAADKARKTWKGDTTAICNIVSLDRRKSQASKKKKKNSKGFAAKLAAEVEGEMDMSGPFRLPGKTEVALFVAPGPKELITVEKICQEVGMETLVVLLNARLSAVSNFGSAATAELFLGKFESVFSLTAGPQDAA----PGCLLYRAYPGRWVVARKPAVGQPKAVLEQSEKPTPDQVRVAF 324
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|1210530791|dbj|GAX10742.1| (hypothetical protein FisN_14Lh261 [Fistulifera solaris]) HSP 1 Score: 139.428 bits (350), Expect = 2.688e-35 Identity = 100/279 (35.84%), Postives = 148/279 (53.05%), Query Frame = 0
Query: 48 MIANFLGGGGEP-QGIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVEGPGAGSADD---DKYEKSDRELARLTVELFKPII-DNTVVIFSQGRQARRAASIW---GTALVKTMALDEMTSSAIKRKNKKAKKGGGFG---ASEGGGEMTT----LPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSE-FEPVFFLNVL-NDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEE 309
MIAN + +P+ +K+ + R A Q AL++R SR +I P GT VE G+ S ++++SDRELARL VE+F+P+ D VIF + QA +A +W +A + +AL+ +K + KK GF A+E E ++ LP EV + ++PGPKEL V ++ +G TL+++LNT L S + A L ++ FE VF L DAA N LL+R+YP +W +A+K A+GPPK +R T EE
Sbjct: 1 MIANLFNTDKQSLPSLPKDVKEAVRKCREATQEALKNRISRMDIEFPVGTKFNVEKSGSKSKGPPTLQEFQRSDRELARLFVEMFQPVGGDRIAVIFKEDEQAEQAKKLWKGDASAASRILALNR------GKKQRTGKKSLGFANKLAAELEEEKSSGPFALPENIEVALFISPGPKELVVVEKICNQVGDGTLVVLLNTRLGSIS-NFGSAAATKLFTQTFESVFHLAAAPQDAA----PNCLLHRAYPMDWVLARKPAVGPPKSFGRWSQRPTLEE 268
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|551668950|ref|XP_005837234.1| (hypothetical protein GUITHDRAFT_104068 [Guillardia theta CCMP2712] >gi|428181390|gb|EKX50254.1| hypothetical protein GUITHDRAFT_104068 [Guillardia theta CCMP2712]) HSP 1 Score: 124.79 bits (312), Expect = 6.576e-30 Identity = 89/280 (31.79%), Postives = 143/280 (51.07%), Query Frame = 0
Query: 60 QGIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVEGPGAGSADD------DKYEKSDRELARLTVELFK--PIIDNTVVIFSQGRQARRAASIWGTALV-KTMALDEMTSSAIKRKNKK-----------AKKGGGFGASEGGGEMTTLPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSEFEPVFFLNVLNDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEEKLIALREGAE 319
+ +P++IKD + LR AMQ AL + SR +I P G+ +GVEG + + D + SDRELAR VE+F+ I N VV F QA +A W A K + LD ++NK+ + KG A + + +P GTEV IVV+P K+L A+ ++ +G L+I+ N L+E + + + + L+EFE V+ L + + + +L+R++PG+W +A +GPPK+L ++ + E +ALR+ E
Sbjct: 3 ENLPKNIKDSLQQLRDAMQAALSSKCSRMDIEFPYGSNIGVEGRKTATDSEVPMVMQDDAQASDRELARAMVEMFRGTEIEQNLVVAFMDSPQANKATKRWAGAFAGKVIVLD-------SKQNKRPARAGGGGFGASVKGTAVKA-----KTSAIPEGTEVLIVVSPSVKDLKALEQICSEVGMGCLVILANARLDELN-YESESQRNFFLNEFERVYH---LRPSPSPSWNGGVLFRAFPGDWVVAMPRKIGPPKVLYRSSQKPSTEVIDVALRKEKE 266
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|1072237226|gb|OEU21953.1| (hypothetical protein FRACYDRAFT_204956 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 121.709 bits (304), Expect = 2.498e-28 Identity = 98/309 (31.72%), Postives = 138/309 (44.66%), Query Frame = 0
Query: 62 IPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVE-------GPGAG--------SADDDK-----YEKSDRELARLTVELFKPII-DNTVVIFSQGRQARRAASIWGTALVKTMALDEM---------------------------------TSSAIKRKNKKAKKGGGFGASEGGGEMTTLPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSEFEPVFFLNVLNDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEEKLIALRE 316
+PR +K+ ++ R A Q AL R SR +I P GT GVE G G G DD+ ++SDRELARL VE+F+P+ DN V F A A S W L T + M +S +N K GG G+ + LP TEV + VAPGPKEL + ++ E++G TL+I+LN L++ + + +F+ VF L A + N LL+R+YPGEW +A+K +G PK + S+ E+ T E A E
Sbjct: 12 LPRDVKEAVSKCRQATQDALAKRLSRMDIEFPVGTDFGVEKKSKPTKGGGRGKRRQDADIDGDDESNIQTTLDRSDRELARLFVEMFQPVGGDNIAVSFVDDSLADAAKSKWKNDLGSTCRVLAMNRRPGGGAKKKKKGKKVLTSARGFAAKLEAEIGSSDDYDNENDKNDFGGKGGSFQ-------LPSTTEVALFVAPGPKELIVIEKICETMGMGTLVILLNARLDKVTNYGTAGTEKLFTEDFDSVFSLAA---APQEEAPNCLLFRAYPGEWVLARKPNVGRPKTILSQTEKPTTVECRQAFDE 310
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|873228589|emb|CEM15517.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 114.775 bits (286), Expect = 1.693e-26 Identity = 77/234 (32.91%), Postives = 118/234 (50.43%), Query Frame = 0
Query: 94 RGTPLGVEGPGAGSADDDKYEKSDRELARLTVELFKPIIDNTVVIFSQGRQARRAASIWGTALVKTMALDEMTSSAIKRKNKKAKKGGGFGASEGGGEMTTLPPG-----TEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEE--ASPHLPKDEAVALLSEFEPVFFLNVLNDAAVKT--LDNVLLYRSYPGEWSIAQKGALGPPKILA-SKPERFTKEEKLIALREG 317
+G+ + E P D +S RELAR+ +EL+ I D V F +A+ A +W + A+ MT + K+AK G E GG +PPG TEV +VV+PG EL V ++S S G +T++I+LN L++ + L DE S F P+F L L + K ++ +L+R+YP +W +A+ +GP K++ S E +E + IA REG
Sbjct: 16 QGSKIDDESPAGSKRSDANMRRSSRELARVFIELWGQIEDAISVAFPTDEEAQEAIEVWKDEDFRVNAVYGMTRPRRADRRKQAK-----GKKERGGTSMVVPPGEIPEDTEVLLVVSPGAAELRQVEKISRSRGLETMIILLNARLDDKVSEGQLTADELEYFRSTFTPIFNLKFLFEGKGKDSKFNDCVLFRTYPDDWQVAKYRPIGPAKVVHRSASELSRREAEAIAEREG 244
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|397586844|gb|EJK53737.1| (hypothetical protein THAOC_26763 [Thalassiosira oceanica]) HSP 1 Score: 101.679 bits (252), Expect = 1.233e-21 Identity = 73/216 (33.80%), Postives = 107/216 (49.54%), Query Frame = 0
Query: 111 DKYEKSDRELARLTVELFKPII-DNTVVIFSQGRQARRAASIWGTALVKTMALDEMTSSAIKRKNKKAKKGGG---------FGA-------SEGGGEMTTLPPGTEVCIVVAPGPKELSAVRRLSESLGFDTLLIILNTPLEEASPHLPKDEAVALLSEFEPVFFLNVLNDAAVKTLDNVLLYRSYPGEWSIAQKGALGPPKILASKPERFTKEE 309
+K E+S+RELARL VE+F+P+ D+ +F+ A A W L E + SAI RK +K+ G F A +G L GTEV I V+PGPKEL A+ R+ +G T +I+LN L D + EFEPV+ L+ A + + L+ RSYP +W IA+K +G PK + ++ +F+ E+
Sbjct: 2 EKLERSNRELARLFVEMFQPLGGDHITCVFNNENLADVARKQWANDLSA-----ECSVSAIDRKRRKSGGIGKKGKKKKAKGFAAVMADAVEDDGSSGPFKLRDGTEVAIFVSPGPKELIAIERICNEVGMGTCVILLNARLSTLDKFASDDARNLFMEEFEPVWNLSA---APQEDAPSCLINRSYPNDWLIARKPKVGTPKTIKTQSTKFSAED 209
BLAST of EWM27148.1 vs. NCBI_GenBank
Match: gi|397573203|gb|EJK48597.1| (hypothetical protein THAOC_32591, partial [Thalassiosira oceanica]) HSP 1 Score: 73.1738 bits (178), Expect = 8.585e-12 Identity = 54/140 (38.57%), Postives = 73/140 (52.14%), Query Frame = 0
Query: 53 LGGGGEPQGIPRSIKDGINGLRFAMQRALRDRKSRAEINLPRGTPLGVE----GPGAGSA-----DDD-------KYEKSDRELARLTVELFKPI-IDNTVVIFSQGRQARRAASIWGTALVKTMALDEMTSSAIKRKNK 175
G EPQ +P+ +KD I+ R A+Q+AL DR SR +I +P G GVE G G S+ DDD K E+S+RELARL VE+F+P+ D+ +F+ A A W L E + SAI RK +
Sbjct: 19 FGDKAEPQ-LPKDVKDAISKCRGAVQKALEDRLSRMDIEMPVGANFGVEKNRKGKGKLSSLTSGGDDDNEGLTMEKLERSNRELARLFVEMFQPLGGDHITCVFNNENLADVARKQWANDLSA-----ECSVSAIDRKRR 152 The following BLAST results are available for this feature:
BLAST of EWM27148.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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