EWM27181.1, cds3456 (CDS) Nannochloropsis gaditana

Overview
NameEWM27181.1
Unique Namecds3456
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:481858..484104 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27181.1
Productwhite-brown-complex abc transporter family
Orig transcript idgnl|cribi|Naga_100010g18.6151.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:481858..484104 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|585109361|gb|EWM27181.1| (white-brown-complex abc transporter family [Nannochloropsis gaditana])

HSP 1 Score: 1536.55 bits (3977), Expect = 0.000e+0
Identity = 748/748 (100.00%), Postives = 748/748 (100.00%), Query Frame = 0
Query:    1 MTFPGPSSGNVNGPVILQPLDVMVSNATETPPPGPESVWTRPVLGINTLLHVPRFSDWSGGDATRDGLGGVAVLFGGKITQVGNVGALQFPKNSHYHLQEGSSWFKGVSEAAVEAQSLISMKDADLQGPECWESETESLLRSEALGLPVGGHGASMSFCCFVGSLCPFEGVAVLCPLEGGYFCLPNMTRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIITKADDSLYEAWQIFSSSSARNGSDLRRGDLFGYWVPSEAGNVGDDGVDGAEDWRRSLSTGSSSSGSSIYRSGCHTSASQYGGKKRAISTQSAVEHGRKFRN 748
            MTFPGPSSGNVNGPVILQPLDVMVSNATETPPPGPESVWTRPVLGINTLLHVPRFSDWSGGDATRDGLGGVAVLFGGKITQVGNVGALQFPKNSHYHLQEGSSWFKGVSEAAVEAQSLISMKDADLQGPECWESETESLLRSEALGLPVGGHGASMSFCCFVGSLCPFEGVAVLCPLEGGYFCLPNMTRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIITKADDSLYEAWQIFSSSSARNGSDLRRGDLFGYWVPSEAGNVGDDGVDGAEDWRRSLSTGSSSSGSSIYRSGCHTSASQYGGKKRAISTQSAVEHGRKFRN
Sbjct:    1 MTFPGPSSGNVNGPVILQPLDVMVSNATETPPPGPESVWTRPVLGINTLLHVPRFSDWSGGDATRDGLGGVAVLFGGKITQVGNVGALQFPKNSHYHLQEGSSWFKGVSEAAVEAQSLISMKDADLQGPECWESETESLLRSEALGLPVGGHGASMSFCCFVGSLCPFEGVAVLCPLEGGYFCLPNMTRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIITKADDSLYEAWQIFSSSSARNGSDLRRGDLFGYWVPSEAGNVGDDGVDGAEDWRRSLSTGSSSSGSSIYRSGCHTSASQYGGKKRAISTQSAVEHGRKFRN 748          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|1183429218|gb|ORY53502.1| (hypothetical protein BCR33DRAFT_654706 [Rhizoclosmatium globosum])

HSP 1 Score: 266.544 bits (680), Expect = 3.248e-74
Identity = 167/479 (34.86%), Postives = 247/479 (51.57%), Query Frame = 0
Query:  170 GVAVLCPLEGGYFCLPNMTRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIIT 648
            G  V C    GY+       P  C  G YCP+P  V +C  G YC  GSSA   C +  +C  P     +K   G + LVL+       A+L  +FL    YYR     E +     TS    Y  L +        + ++K+  K S + +++  ++K        S  G+     + L S  +  + G                         H   R++ +F DL+++L  G +++L GV+G  ++GR+TA+MGPSG GKTT ++ L   +G  +R  G   IN           ++G+VPQDD+M  +LTV+EN+LY  ++R   + S  E   HV+ ++ +L L    +S IGST +RGISGGQRKRVN+G+EL + PL +FLDEPTSGLDST + ++   +  ++  GLTI AVIHQPR+E+F   DDV+ +  GG  AY G       YF   GF F+  +NPAD ++DI++
Sbjct:   35 GTFVACKYPQGYY------EPFACPGGFYCPSPKEVFVCPAGSYCLTGSSAPRACIFGSYC--PTGSTVEK-HYGFLILVLIID-----ALLAAVFL----YYRLR---ELKANNEPTSALIPY-ALQKAYSDFSSRYLKKKEAGKASSSPATSPAASKSALVVNKGSAAGAVAENISILTSGFKKGLEG-------------------------HDDLRMNYKFEDLSLKLATG-KQILKGVSGEIKAGRMTAIMGPSGAGKTTFMNVL---MGKVSRTDGSLRINNVVAEMQTYRKIIGYVPQDDVMISELTVRENILYSARVRLPQTWSNQEVEDHVDSLLKALNLAHVSNSRIGSTLERGISGGQRKRVNIGLELAAAPLSIFLDEPTSGLDSTAALDVANIMSSISRLGLTIVAVIHQPRLEIFEAFDDVLMIAPGGLTAYIGPVDQVQDYFKSLGFVFDTRLNPADVLMDILS 462          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|1183418243|gb|ORY42612.1| (hypothetical protein BCR33DRAFT_851654 [Rhizoclosmatium globosum])

HSP 1 Score: 270.781 bits (691), Expect = 9.831e-74
Identity = 176/521 (33.78%), Postives = 272/521 (52.21%), Query Frame = 0
Query:  154 ASMSFCCFVGSLCPFEGVA------VLCPLEG--------GYFCLPN-MTRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTH-YQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGST--KSTTTPLRSAKRNSISGEEEGPGVA--------RPSLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALH-DVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDII 647
            +++S  C  G  CP+   +      V CP           G+ C P  +  P  C  G+YCP    ++ C +G YCP G+     CT    C K            V+  V +F   AA A ++   L  +++ +      RRK G++++  TH +  ++  L +++  + R        + +    H++K +    A + + S+  +  T   R++  +++  EE+ P  A        R  L   S         H   R++ +F  + + L  G+R VL GVTG  R GR+TA++GPSG GKTT ++ L   +G   +  G+ +IN S ES   L+  ++G+VPQ+D+M  +LTV+EN+L+  ++R   + S  + + HV+ V+ +L L    H++IG   +RGISGGQRKRVN+GMEL + PL +FLDEPTSGLDST++ E+   L  +   G+TI AVIHQPRIE+F    DVI +  GGRVAY G       YF   GF FE + N +D  +DI+
Sbjct:   56 STLSLTCAPGFYCPYLNTSDPSTLPVFCPPSSMCTKYRMFGFPCSPQGLYEPLICKPGYYCPDSHTMLPCPEGHYCPSGTVTPHKCTILTSCPK----------GSVMQTVYLF--LAAAAGIDGFLLLLQWFVQLQ---HRRKAGIISTNPTHRFHAIYSKLAELETWYTR--------NIMPVFGHASKSRLKALAQTMMRSSPPRDDTDSRRASSASTLMIEEDIPIPAEEISRETLRHDLTALSRAFQDTFPLHGQVRMNFRFEGMELTLKSGKR-VLTGVTGRIREGRMTAILGPSGAGKTTFMNVL---MGKVDKTGGKLWIN-SQESEVHLYRKIIGYVPQEDVMLRELTVRENILHSARVRLPRNWSTKKIQNHVDNVLTTLKLSHVAHTIIGDETERGISGGQRKRVNIGMELAAAPLTIFLDEPTSGLDSTSALEVADVLSSMANLGITIVAVIHQPRIEIFDKFHDVIMIAPGGRVAYMGPVHKVRPYFEALGFHFEDSANVSDVAMDIL 548          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|1183429249|gb|ORY53533.1| (PEP carboxykinase-like protein [Rhizoclosmatium globosum])

HSP 1 Score: 263.848 bits (673), Expect = 3.203e-73
Identity = 171/485 (35.26%), Postives = 251/485 (51.75%), Query Frame = 0
Query:  166 CPFE--GVAVLCPLEGGYFCLPNMTRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIIT 648
            C F   G   LC    GY+       P  C  G YCPT   +++C  G YC  GSSA V C +  +C  P     +K   G + LV+      A      IFL  R   R+ +        L+         L +  +     + ++K+ EK                  + I T      T  P+++ K ++IS       ++  + G +  +     E H+  R+D +F  L+++L  G+ ++L GV+G  +SGR+TA+MGPSG GKTT ++ L   +G  +R  G   IN           ++G+VPQDDIM  +LTV+EN+LY  ++R   + S  E   HV+ ++ +L L    +S IGST DRGISGGQRKRVN+G+EL + PL +FLDEPTSGLDST + + +  +  ++  GLTI AVIHQPR+E+F   DDV+ +  GG  AY G      QYF   GF F+  +NPAD ++DI++
Sbjct:   44 CLFRRLGTGELCDSPQGYY------EPYVCPGGFYCPTAKEIVVCPAGSYCLTGSSAPVKCMFGSYC--PTGSAVEK-HYGFLLLVVAIDVLIA-----AIFLFYRL--RELKANNEPISALIP------YALQKAYIDFSNRYLKKKEYEKTP---------------TSEIDT-----RTLIPVQAIKNDTIS-----KNISILTEGFKKGL-----EGHESLRMDFKFEGLSLKLATGK-QILKGVSGEIKSGRMTAIMGPSGAGKTTFMNVL---MGKVSRTDGTLRINDVVAEMEKYRKIIGYVPQDDIMIPELTVRENILYSARIRLPQTWSNKEVEDHVDSLLKALNLAHVANSRIGSTLDRGISGGQRKRVNIGLELAAAPLSIFLDEPTSGLDSTAALDAINIMSSISRLGLTIVAVIHQPRLEIFEAFDDVLMIAPGGLTAYIGPVDGVQQYFESLGFVFDSRLNPADVLMDILS 472          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|1183393047|gb|ORY18078.1| (hypothetical protein BCR33DRAFT_777678 [Rhizoclosmatium globosum])

HSP 1 Score: 261.922 bits (668), Expect = 5.614e-72
Identity = 168/489 (34.36%), Postives = 249/489 (50.92%), Query Frame = 0
Query:  189 RPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYR----QSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLG--STKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIIT------KAD----DSLYEAWQIF 661
             P+ C  G YCP P  ++ C  G YCPVG+   + C        P    P+   A        F      A+++ I + C F  +        + ++ R   T+R    QE              E D E+    ++ A+   +  ++   ++ LG  S      P+ +     +SG   G    R +L G+  V            ID +F +L ++L  G+  +L GV G  RS R+TA+MGPSGCGKTT +S L  ++    R  G   IN      +    ++G+VPQ+DIM  +LTV+EN+ +  + R   + + A+  ++V+ V+D L L   +HSLIGS  +RG+SGGQRKRVN+GMEL   P+ LFLDEPTSGLDST+S ++ + L ++   GLTI AVIHQPR E+F   +D++ L  GG+ AY G     V YF E G+ F+   NPAD ++DI++      K D    D L + W+ F
Sbjct:   77 EPQLCPAGSYCPDPTTLLNCPSGYYCPVGTVTPIAC-------PPLSNCPESTIAPTY-----FGGIVICAIVDIILVLCYFGIKYDWINKIQSNQKTRLSNTTRKKVEQE------------KAENDPEQGLSEVT-ADEERRRSESVNPLTCLGRPSVVDAKVPV-TGSMEELSGFIGG---FRTALEGKEDV-----------FIDFKFENLGLKLKEGK-TILKGVNGSIRSKRLTAIMGPSGCGKTTFMSVLMGKVA---RTSGTLLINEEECEMSKYKKIIGYVPQEDIMLRELTVRENIFHSARTRLPKTWTAAQVNKYVDDVLDVLNLSHVQHSLIGSETERGVSGGQRKRVNIGMELGGVPIALFLDEPTSGLDSTSSLKVAEILRKIASLGLTIVAVIHQPRYEIFQQFNDILMLVPGGKTAYIGPTAFVVAYFKELGYFFDALANPADILMDILSGKGINQKGDEITPDGLVDRWESF 521          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|1026950919|ref|XP_016613244.1| (hypothetical protein SPPG_00865 [Spizellomyces punctatus DAOM BR117] >gi|907099969|gb|KND05205.1| hypothetical protein SPPG_00865 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 259.61 bits (662), Expect = 1.169e-71
Identity = 175/552 (31.70%), Postives = 262/552 (47.46%), Query Frame = 0
Query:  187 MTRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIITKADDSLYEAWQIFSSSSARNGSDLRRGDLFGYWVPSEAGNVGDDGVDGAED--WRRSLSTGSSSSGSSIYRSGCHTSASQYGGKKRAIST 736
            +  P  C  G+YCP    ++ C  G YC  GSSA + C     C + G          + AL+L F  FA +                     RR   L  S       L   L    + F R+    K ++N+        +      +  +        P    +R+ I       G +R +LGGR+ +            ++ +FR+L++ LP G+  +L+GVTG  R GR+TA+MGPSG GKTT ++ L   +G   R  G  ++NG          V+G+VPQ+DIM  +LTV EN+L+  ++R     S  +  +HV+ V+ +L L    H++IG    RG+SGGQRKRVN+GMEL + PL +FLDEPTSGLD+T + ++   +  LT  GLT+ AVIHQPR+E+F   DD++ +  GG  AY G   +A  YF   GF F PT N AD ++DI+              S     N  ++   DL   W    AG+   DG+    D  +   + T   + G++I+    H        ++R +S+
Sbjct:   68 LYEPVVCPSGYYCPDWKTMIRCPSGYYCHSGSSAPIKCDSLSICGE-GTHSQMYYGPLIFALLLDFVLFAFV-------------------LARRVAALKASE----TPLSVMLPAWSQRFLRKDADVKETENM--------VAHQTIQLDLIKKDDPEIVPYSPRERSVIDTSCLVKGFSR-ALGGRTDLS-----------MNFKFRNLSLVLPDGK-PILSGVTGEIRPGRMTAIMGPSGAGKTTFMNVL---MGKVKRTGGTLYVNGQESEMHVFRKVIGYVPQEDIMLRELTVWENVLHSAKIRLPGDWSAKDVEEHVHGVLSALNLSHVAHTIIGDETTRGVSGGQRKRVNIGMELAAVPLAIFLDEPTSGLDATAALDVADIMSSLTHLGLTLVAVIHQPRVEIFERFDDLLMIAPGGLTAYLGPVNEAKTYFEAMGFQFAPTANTADVLMDIL--------------SGRGINNLQNITVDDLVVAWEKRSAGDGDIDGLQSVSDTEFHEHVPTLRRTRGANIFWQIYHCHNRYLVQQERTLSS 557          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|1183503890|gb|ORZ27488.1| (hypothetical protein BCR41DRAFT_419248 [Lobosporangium transversale])

HSP 1 Score: 262.692 bits (670), Expect = 1.501e-71
Identity = 177/548 (32.30%), Postives = 273/548 (49.82%), Query Frame = 0
Query:  113 VEAQSLISMKDA--DLQGPECWESETESLLRSEALGLPVGG--HGASMSFCCFVGSLCPFEGVAVLCPLEGGYFCLPNMTRPECCAEGHYCPT-PGVVMICEQGGYCPVGSSAI-VPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRERHKVDRI----DLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLT-GTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIITK 649
            ++  +L+ + DA   L GP+C   +T           P+    + ++ S+ C  G+ C     +  CP   G++C PN  +P  C  G+YC      + +C Q  YCP GS      C W   C   G     K   G++  V+VF     +      ++  RF   ++   E+R + +    G +     + LL   +   ++K G +++   S          +   +       ++T+ L S +      E+E  G A  + G   +  P  R +  V ++    D++F+ L + LP G   +L  V+G  RSGR  A+MGPSG GKTTLIS L++++    +  GR  ING     +    ++GFVPQ+DIM  +LTV + LLY   +R    + + E  + V  +ID LGL     S++G  E RGISGGQRKRVN+GMEL + P +L LDEPTSGLDS+TS ++ + L  +    GLT+AAVIH P    F   DD++ LG+ GRV ++G   +A  YF   GFP     +P+D  +D+I+ 
Sbjct:    4 LDYYALLKLADAPGTLSGPKCQYVQT-----------PINSFTNTSTPSWGCPAGNFCLSPKHSAPCP--PGFYCPPNTAQPMYCCAGYYCSEDTKTITLCPQNQYCPAGSVGRGTSCLWLASC-PAGSSSASKF--GLILFVIVFMVVICIV----FYIHKRFEAVRTHHLEKRLQWIHNHNGNY-----DSLLAADDDEQKQKQGLEDTKEGSGRLSRLSRDTSNPDVHVTSPDDTSTSELTSMELTIQVTEDEKEGTAAGTAGAMPT--PAKRRKRAVSKVTRTFDIEFQKLGLTLPNGT-SILQNVSGILRSGRTCAIMGPSGSGKTTLISMLTSKI---PKDEGRILINGQEGDLSYYRKLIGFVPQEDIMMRELTVHDVLLYSAYMRLPSDLKKNEMTEKVLEIIDFLGLNSVMDSVVGDAERRGISGGQRKRVNIGMELVTDPSILLLDEPTSGLDSSTSGDVCKLLRSVARRKGLTVAAVIHSPSPVAFNQFDDLLLLGQNGRVVFHGPRTEAPAYFAAIGFPVPVDSSPSDFYMDVISN 520          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|1183408239|gb|ORY32748.1| (hypothetical protein BCR33DRAFT_684707 [Rhizoclosmatium globosum])

HSP 1 Score: 258.07 bits (658), Expect = 4.671e-71
Identity = 168/494 (34.01%), Postives = 244/494 (49.39%), Query Frame = 0
Query:  183 CLPN-MTRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCRFYYRQSRDTERRKRGLLTSRGTHYQELHEPLLQIKEIFDREKDGEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARPSLGGRSSVGPVLRE--RHKVDRIDLQFRDL--TVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDIIT----------KADDSLYEAWQIF 661
            CLP     P+ C  G YCP+P +++ C +G +CPVG+   + C     C  P          G++   ++      L ++ K                            HY +   PL +IK++            +     H    K+  + I ++ +  +               EE     +RPSL   S      R     K   +D +F DL  T++ P G+  VL GV G  RS R+TA+MGPSGCGKTT ++ L   +G  TR  G   IN      +    V+G+VPQ+DIM  +LTV+EN+ +  ++R   + +  +  ++V+ VI+ L L   +HSLIGS  +RG+SGGQRKRVN+GMEL   PL LFLDEPTSGLDST+S ++ + L ++   GLTI AVIHQPR E+F   +D++ L  GG+ AY G     V YF E G+ F+   NPAD ++DI++             D L E W+ F
Sbjct:   70 CLPQGPYEPQLCPAGSYCPSPTLMLPCPKGSFCPVGTITPINCPLLSTC--PESTTTPTYYGGIIYCAIIDVVLVILYLIAK----------------------------HYPQ---PLQRIKKV------------SHEWTLHDMPKKRVDSTIVSIAAASN-------------DNEE-----SRPSLAYLSRFMQGFRAALEGKNVFMDFEFEDLGLTLKKPAGK-CVLKGVNGEIRSKRLTAIMGPSGCGKTTFMNVL---MGKVTRTSGSLLINDQECEMSKYKKVIGYVPQEDIMLRELTVRENIFHSARVRLPRTWTDVQVNEYVDEVIEVLSLTHVQHSLIGSENERGVSGGQRKRVNIGMELAGVPLALFLDEPTSGLDSTSSLKVAEILRKIASLGLTIVAVIHQPRYEIFQQFNDILMLVPGGKTAYIGPTAHVVDYFKELGYTFDTLANPADILMDILSGKGVHSCGENITPDRLVELWESF 496          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|1012348917|gb|KYP60108.1| (ABC transporter G family member 28 [Cajanus cajan])

HSP 1 Score: 256.144 bits (653), Expect = 2.205e-70
Identity = 176/538 (32.71%), Postives = 263/538 (48.88%), Query Frame = 0
Query:  152 HGASMSFCCFVGSLCPFEGVAV---LCPLEGGYFCLPNM-----------------TRPECCAEGHYCPTPGVVMICEQGGYCPVGSSAIVPCTWWMWCRKPGLKRPDKIAAGVVALVLVFSTFAALAVLNKIFLRCR---FYYRQSRDTERRKRGLLTSRGT--------HYQELHEP-----LLQIKEIFDREKD---GEKNSDNISSANHSNKIKQTQTAISTLGSTKSTTTPLRSAKRNSISGEEEGPGVARP---SLGGRSSVGPVLRERHKVDRIDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDII 647
            HG +    C +GS CP   +     +C  E   + LP M                 +R   CA G YC  P   + C  G YC +GS++   C     C    + + +  A G++ +       AAL+ L  I   C       R+ R  + R+   ++ R T          ++L +        Q+   F R+KD     +N  NI    H     + +   +++   K   T  +  K      E+E          +L G  S+     E+ K   I++ F+DLT+ L    + +L  VTG  + GR+TAVMGPSG GKTT +SA++ +   G +V G  FING  ES  +   ++GFVPQDDI++ +LTV+EN  +    R    + + ++   V RVI+ LGL P R+SL+G+ E RGISGGQRKRVNVG+E+  +P ++ LDEPTSGLDS +S  L++ L R    G+ I  V+HQP   +F   DD+I L +GG   Y+GS +   +YF + G      +NP D  +DI+
Sbjct:  173 HGITCMIPCPLGSHCPLATLNKETGVC--EPYLYQLPPMQPDHTCGGANIWADVSSSREIFCAAGSYCSNPTKRIPCSSGHYCRMGSTSEQRCFKLSSCNSNTVTQ-NMHAYGIMLI-------AALSTLLLIIYSCSDQVLTTRERRMAKSREAAAISVRKTANARQRWKKAKDLAKKGSSGLQAQLSRTFSRKKDFMMHTENDPNIRKNVHVEIETRDKNVTASVSKEKQPHTHTQIFKYAYAQLEKEKAQQEENRYLTLSGVISMA-TKSEQRKRPLIEISFKDLTLSLKAHNKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSAIAGK-AFGCKVTGSIFINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENFRFSALCRLPADLPKPDKVLIVERVIEFLGLHPVRNSLVGTVEKRGISGGQRKRVNVGLEMVIEPSLMILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGSVKKVEEYFADLGINIPKHINPPDYFIDIL 698          
BLAST of EWM27181.1 vs. NCBI_GenBank
Match: gi|290999767|ref|XP_002682451.1| (predicted protein [Naegleria gruberi] >gi|284096078|gb|EFC49707.1| predicted protein, partial [Naegleria gruberi])

HSP 1 Score: 240.736 bits (613), Expect = 6.279e-70
Identity = 124/257 (48.25%), Postives = 166/257 (64.59%), Query Frame = 0
Query:  390 IDLQFRDLTVELPGGRRKVLNGVTGGFRSGRVTAVMGPSGCGKTTLISALSNRLGLGTRVIGRTFINGSPESSTALHDVMGFVPQDDIMYEDLTVKENLLYCCQLRADPSMSRAEQRQHVNRVIDSLGLFPSRHSLIGSTEDRGISGGQRKRVNVGMELTSKPLVLFLDEPTSGLDSTTSAELMQYLHRLTGTGLTIAAVIHQPRIEVFLGVDDVIFLGRGGRVAYYGSARDAVQYFTEQGFPFEPTVNPADRILDI 646
            +D+ F+DL + L G  +KVL+GVTG  + G++TAVMG SG GK+T I+ LSNR   G +V G+ F+NG  E  +  +  +GFVPQDDIM   +TV+E L +  + R D +    +    VN VI  L L   RHS+IG  E RGISGGQ+KRVNVG+EL S P VLFLDEPTSGLDS +S E+ + L  ++  G+T+  VIHQPR E+F   D+++ LG+GGR  Y GS     +YF E GF      N AD ++D+
Sbjct:   37 VDIGFQDLGLVLRGSGKKVLDGVTGEIKHGKLTAVMGLSGAGKSTFITTLSNRAYYGAQV-GKVFVNGVEEPLSKYNRKIGFVPQDDIMISSMTVEETLFFSAKTRLDANTPSKQIDSIVNDVIKVLRLEDVRHSIIGDQEKRGISGGQKKRVNVGIELVSSPYVLFLDEPTSGLDSASSKEVCEALQAISSCGITVITVIHQPRYEIFNMFDNLLLLGKGGRTIYLGSVHRVEEYFKEIGFTKPLGTNLADFVIDV 292          
The following BLAST results are available for this feature:
BLAST of EWM27181.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109361|gb|EWM27181.1|0.000e+0100.00white-brown-complex abc transporter family [Nannoc... [more]
gi|1183429218|gb|ORY53502.1|3.248e-7434.86hypothetical protein BCR33DRAFT_654706 [Rhizoclosm... [more]
gi|1183418243|gb|ORY42612.1|9.831e-7433.78hypothetical protein BCR33DRAFT_851654 [Rhizoclosm... [more]
gi|1183429249|gb|ORY53533.1|3.203e-7335.26PEP carboxykinase-like protein [Rhizoclosmatium gl... [more]
gi|1183393047|gb|ORY18078.1|5.614e-7234.36hypothetical protein BCR33DRAFT_777678 [Rhizoclosm... [more]
gi|1026950919|ref|XP_016613244.1|1.169e-7131.70hypothetical protein SPPG_00865 [Spizellomyces pun... [more]
gi|1183503890|gb|ORZ27488.1|1.501e-7132.30hypothetical protein BCR41DRAFT_419248 [Lobosporan... [more]
gi|1183408239|gb|ORY32748.1|4.671e-7134.01hypothetical protein BCR33DRAFT_684707 [Rhizoclosm... [more]
gi|1012348917|gb|KYP60108.1|2.205e-7032.71ABC transporter G family member 28 [Cajanus cajan][more]
gi|290999767|ref|XP_002682451.1|6.279e-7048.25predicted protein [Naegleria gruberi] >gi|28409607... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3465rna3465Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications