EWM27201.1, cds3453 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|585109381|gb|EWM27201.1| (g10 protein [Nannochloropsis gaditana]) HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWAEGGGEEDEEEEDDEAEEEEEEEEEGHGKRSVHDERTEGGPEMHIHKKVKA 262
MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWAEGGGEEDEEEEDDEAEEEEEEEEEGHGKRSVHDERTEGGPEMHIHKKVKA
Sbjct: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWAEGGGEEDEEEEDDEAEEEEEEEEEGHGKRSVHDERTEGGPEMHIHKKVKA 262
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|299472627|emb|CBN78279.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 255.373 bits (651), Expect = 1.604e-81 Identity = 121/200 (60.50%), Postives = 143/200 (71.50%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQ 200
MSR+ RK RPPPGF+ LEPTL ALE ELRE +VNE HEGKRKNE+LWPV QI WQRSRY++DM Y Y+ I+++V EYC++ KLVD L AKWKKPGYE+LC TY INTKN+KFGT SICRVPKQ L+ GTVVED N GCRGC++G G +NIFGNKYGQYLA IQV R++++
Sbjct: 1 MSRFARKERPPPGFEILEPTLNALENELRE-----------------------------KVNEQHEGKRKNEALWPVFQITWQRSRYVYDMHYVYKAITKDVLEYCIRSKLVDGPLMAKWKKPGYERLCSTYVINTKNYKFGTVSICRVPKQYLSAGTVVEDVNTGCRGCATGAGGNKNIFGNKYGQYLAAIQVARQKQK 171
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|301108087|ref|XP_002903125.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262097497|gb|EEY55549.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 253.447 bits (646), Expect = 2.118e-81 Identity = 124/233 (53.22%), Postives = 161/233 (69.10%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWAEGGGEEDEEEEDDEAEEEEEE 233
MS+W +K R P G++Y++P + ALE+ELRE ++NE HEGKR+ E+LWPVHQINWQRSRY++DMFY+Y+KISREVY+YCV+ KLVDA L AKWKKPGYE+LC T+AINTKN+ +GT SICRVP+Q L+EG VV++ + GCRGC+SG G NIFGNKYGQ+LA IQ+ RE +A + VWA +ED E D+E + + +E
Sbjct: 1 MSKWSKKNRAPAGYEYIQPVMDALESELRE-----------------------------KMNEPHEGKRQCEALWPVHQINWQRSRYVYDMFYKYKKISREVYDYCVRRKLVDANLIAKWKKPGYERLCSTFAINTKNYNYGTVSICRVPRQQLSEGQVVQEKHSGCRGCASGPGGYHNIFGNKYGQHLARIQIARE--EAAQKEDIKQVWATEQEQEDYESGDEEKKRKRDE 202
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|669165146|ref|XP_008618135.1| (hypothetical protein SDRG_13815 [Saprolegnia diclina VS20] >gi|530730245|gb|EQC28487.1| hypothetical protein SDRG_13815 [Saprolegnia diclina VS20]) HSP 1 Score: 249.98 bits (637), Expect = 4.592e-80 Identity = 126/247 (51.01%), Postives = 163/247 (65.99%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWAEGGGEEDEEEEDDEAEEEEEEEEEGHGKRSVHDER 247
MSR +K R PPG++YL P + ALE+ELRE +N+ H+G RK E LWP+HQINWQRSRY++DM+Y+YEKIS+EVY+YC++MKL DA L AKWKKPGYE+LC T+AIN KN+ +GT SICRVP+Q L +G +V++ + GCRGC+SG G NIFGNKYGQ+LA IQ+ RER+ AA A VWA +ED++ D EEE +E +E + DER
Sbjct: 1 MSRLTKKGRAPPGYEYLAPVMDALESELRE-----------------------------RMNDPHDGLRKCEVLWPIHQINWQRSRYVYDMYYKYEKISKEVYDYCLRMKLADANLIAKWKKPGYERLCSTFAINPKNYNYGTVSICRVPRQQLADGQLVQERHSGCRGCASGPAGYHNIFGNKYGQHLAAIQIMRERRNDAAAGA---VWAP---KEDDDRSDVGDEEETKEAQEDEVETKQADER 212
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|570942615|gb|ETP07872.1| (hypothetical protein F441_16000 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 248.825 bits (634), Expect = 1.308e-79 Identity = 119/212 (56.13%), Postives = 150/212 (70.75%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWA 212
MS+W +K R P G++Y++P + ALE+ELRE ++NE HEGKR+ E+LWPVHQINWQRSRY++DMFY+Y+KISREVY+YCV+ KLVDA L AKWKKPGYE+LC T+AINTKN+ +GT SICRVP+Q L+EG VV++ + GCRGC+SG G NIFGNKYGQYLA IQ+ RE +A + VWA
Sbjct: 1 MSKWSKKNRAPAGYEYIQPVMDALESELRE-----------------------------KMNEPHEGKRQCEALWPVHQINWQRSRYVYDMFYKYKKISREVYDYCVRRKLVDANLIAKWKKPGYERLCSTFAINTKNYNYGTVSICRVPRQQLSEGQVVQEKHSGCRGCASGPGGYHNIFGNKYGQYLARIQIARE--EAAKKEDIKQVWA 181
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|566015079|gb|ETI37990.1| (hypothetical protein F443_16172 [Phytophthora parasitica P1569] >gi|567952510|gb|ETK78185.1| hypothetical protein L915_15728 [Phytophthora parasitica] >gi|567981183|gb|ETL31626.1| hypothetical protein L916_15619 [Phytophthora parasitica] >gi|568040575|gb|ETM38024.1| hypothetical protein L914_15576 [Phytophthora parasitica] >gi|570318821|gb|ETO66769.1| hypothetical protein F444_16155 [Phytophthora parasitica P1976] >gi|570973226|gb|ETP35907.1| hypothetical protein F442_16023 [Phytophthora parasitica P10297]) HSP 1 Score: 248.44 bits (633), Expect = 1.795e-79 Identity = 119/212 (56.13%), Postives = 150/212 (70.75%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWA 212
MS+W +K R P G++Y++P + ALE+ELRE ++NE HEGKR+ E+LWPVHQINWQRSRY++DMFY+Y+KISREVY+YCV+ KLVDA L AKWKKPGYE+LC T+AINTKN+ +GT SICRVP+Q L+EG VV++ + GCRGC+SG G NIFGNKYGQYLA IQ+ RE +A + VWA
Sbjct: 1 MSKWSKKNRAPAGYEYIQPVMDALESELRE-----------------------------KMNEPHEGKRQCEALWPVHQINWQRSRYVYDMFYKYKKISREVYDYCVRRKLVDANLIAKWKKPGYERLCSTFAINTKNYNYGTVSICRVPRQQLSEGQVVQEKHSGCRGCASGPGGYHNIFGNKYGQYLARIQIARE--EAAKKEDIKQVWA 181
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|568010682|gb|ETL84867.1| (hypothetical protein L917_15439 [Phytophthora parasitica]) HSP 1 Score: 248.44 bits (633), Expect = 2.410e-79 Identity = 119/212 (56.13%), Postives = 150/212 (70.75%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWA 212
MS+W +K R P G++Y++P + ALE+ELRE ++NE HEGKR+ E+LWPVHQINWQRSRY++DMFY+Y+KISREVY+YCV+ KLVDA L AKWKKPGYE+LC T+AINTKN+ +GT SICRVP+Q L+EG VV++ + GCRGC+SG G NIFGNKYGQYLA IQ+ RE +A + VWA
Sbjct: 1 MSKWSKKNRAPAGYEYIQPVMDALESELRE-----------------------------KMNEPHEGKRQCEALWPVHQINWQRSRYVYDMFYKYKKISREVYDYCVRRKLVDANLIAKWKKPGYERLCSTFAINTKNYNYGTVSICRVPRQQLSEGQVVQEKHSGCRGCASGPGGYHNIFGNKYGQYLARIQIARE--EAAKKEDIKQVWA 181
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|673044919|ref|XP_008876420.1| (hypothetical protein H310_11495 [Aphanomyces invadans] >gi|574467808|gb|ETV94829.1| hypothetical protein H310_11495 [Aphanomyces invadans]) HSP 1 Score: 247.669 bits (631), Expect = 3.412e-79 Identity = 120/240 (50.00%), Postives = 161/240 (67.08%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWAEG-----GGEEDEEEEDDEAEEEEEEEE 235
MSR+ +K RPPPG++Y++P + ALE+ELRE T + HEG RK E++WP+ QINWQRSRY++DM+Y+Y+KIS+EVYEYC++MKL DA L AKWKKPGYE+LC T+AIN+KN+ +GT SICRVP+Q L +G +++ + GCRGC+SG G NIFGNKYGQ+LA IQ+ RER+ GVWA+ EDEE+ D+A + EE++E
Sbjct: 1 MSRFTKKGRPPPGYEYIQPVMDALESELRERT-----------------------------TDPHEGLRKCEAMWPIQQINWQRSRYVYDMYYKYKKISKEVYEYCLRMKLADANLIAKWKKPGYERLCSTFAINSKNYNYGTVSICRVPRQQLADGQQIQERHSGCRGCASGPGGYHNIFGNKYGQHLAAIQIMRERRGGD------GVWAQNDEADVSDVEDEEDATDDAVQNEEDDE 205
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|1214699875|gb|OWZ12575.1| (hypothetical protein PHMEG_00014238 [Phytophthora megakarya]) HSP 1 Score: 247.284 bits (630), Expect = 3.761e-79 Identity = 115/199 (57.79%), Postives = 146/199 (73.37%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERK 199
MS+W +K R P G+DY++P + ALE+ELRE ++NE HEGKR+ E+LWPVHQINWQRSRY++DMFY+Y+KISREVY++C++ KLVDA+L AKWKKPGYE+LC T+AINTKN+ +GT SICRVP+Q L+EG VV++ + GCRGC+SG G NIFGNKYGQYLA IQ+ RE K
Sbjct: 1 MSKWSKKNREPAGYDYIQPVMDALESELRE-----------------------------KMNEPHEGKRQCEALWPVHQINWQRSRYVYDMFYKYKKISREVYDFCIRRKLVDASLVAKWKKPGYERLCSTFAINTKNYNYGTVSICRVPRQQLSEGQVVQEKHSGCRGCASGPGGYHNIFGNKYGQYLARIQIAREEK 170
BLAST of EWM27201.1 vs. NCBI_GenBank
Match: gi|953497490|emb|CEG40977.1| (g10-like protein [Plasmopara halstedii]) HSP 1 Score: 254.218 bits (648), Expect = 5.129e-79 Identity = 127/254 (50.00%), Postives = 168/254 (66.14%), Query Frame = 0
Query: 1 MSRWGRKARPPPGFDYLEPTLAALEAELRESTYINLLCNRRHAHVIIFLMLFDRYRPQSEVNEGHEGKRKNESLWPVHQINWQRSRYIFDMFYRYEKISREVYEYCVQMKLVDAALAAKWKKPGYEKLCCTYAINTKNFKFGTTSICRVPKQVLNEGTVVEDANCGCRGCSSGDQGERNIFGNKYGQYLAGIQVRRERKQAKAAAAVAGVWAE-------GGGEE----DE--EEEDDEAEEEEEEEEEGHGKR 241
MS+W ++ R P G++Y+EP + ALE ELRE +NE HEGKR+ E+LWPVHQINWQRSRY++DMFY+Y+KISREVY+YC++ KLVD+ L AKWKKPGYE+LC T+AINTKN+ +GT SICRVP+Q L+EG V+++ + GCRGC+SG G NIFGNKYGQYLA IQ+ RE +A + VWA G+E DE E+ D+++++EE +E E K+
Sbjct: 208 MSKWSKRVRAPAGYEYIEPVMDALERELRE-----------------------------RMNEPHEGKRQCEALWPVHQINWQRSRYVYDMFYKYKKISREVYDYCIRRKLVDSNLIAKWKKPGYERLCSTFAINTKNYNYGTVSICRVPRQQLSEGQVIQEKHSGCRGCASGPGGYHNIFGNKYGQYLARIQIARE--EAAKKNTINQVWATEEEEEAYTSGDEKRKRDERIEKNDNDSDDEETKESETPQKK 430 The following BLAST results are available for this feature:
BLAST of EWM27201.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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