EWM27231.1, cds3452 (CDS) Nannochloropsis gaditana

Overview
NameEWM27231.1
Unique Namecds3452
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:467770..469983 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27231.1
ProductZinc finger, RING-type
Orig transcript idgnl|cribi|Naga_100010g14.6201.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:467770..469983 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
Homology
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|553190835|ref|XP_005855273.1| (hypothetical protein NGA_0075710 [Nannochloropsis gaditana CCMP526] >gi|422293798|gb|EKU21098.1| hypothetical protein NGA_0075710 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1503.8 bits (3892), Expect = 0.000e+0
Identity = 737/737 (100.00%), Postives = 737/737 (100.00%), Query Frame = 0
Query:    1 MQAGGSDGLPGVAGRFGGSAEETRRRPATKTGAQVPGGMRLHHTEGRVDVQLFMNPVAGLTDLSLVHGYFKLLDGPFSSERDVFAVLKGVYLRRDGRLLLRTVSQKQAGTLGFAYTLPASSAKTFRAQGSDSDKPAGRATRTLGEPSQRLGGGEGVEGNPGDASDQASPSHMAANADTGLERRIAGVWGDVASYPDVEMRLDAVLREVAASAGTDLEDRAAGREAEEADVFFGMQLQADKKLDMDGADESEGAEVVGLTVLKGGALLAGMEEKAAPDGGLLETVLIPDRTKERYFRHQTSNGRRCVFTLDARSSPRLNASQVMGQTGAQGDASSSSSTAAAESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLPHR 737
            MQAGGSDGLPGVAGRFGGSAEETRRRPATKTGAQVPGGMRLHHTEGRVDVQLFMNPVAGLTDLSLVHGYFKLLDGPFSSERDVFAVLKGVYLRRDGRLLLRTVSQKQAGTLGFAYTLPASSAKTFRAQGSDSDKPAGRATRTLGEPSQRLGGGEGVEGNPGDASDQASPSHMAANADTGLERRIAGVWGDVASYPDVEMRLDAVLREVAASAGTDLEDRAAGREAEEADVFFGMQLQADKKLDMDGADESEGAEVVGLTVLKGGALLAGMEEKAAPDGGLLETVLIPDRTKERYFRHQTSNGRRCVFTLDARSSPRLNASQVMGQTGAQGDASSSSSTAAAESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLPHR
Sbjct:   81 MQAGGSDGLPGVAGRFGGSAEETRRRPATKTGAQVPGGMRLHHTEGRVDVQLFMNPVAGLTDLSLVHGYFKLLDGPFSSERDVFAVLKGVYLRRDGRLLLRTVSQKQAGTLGFAYTLPASSAKTFRAQGSDSDKPAGRATRTLGEPSQRLGGGEGVEGNPGDASDQASPSHMAANADTGLERRIAGVWGDVASYPDVEMRLDAVLREVAASAGTDLEDRAAGREAEEADVFFGMQLQADKKLDMDGADESEGAEVVGLTVLKGGALLAGMEEKAAPDGGLLETVLIPDRTKERYFRHQTSNGRRCVFTLDARSSPRLNASQVMGQTGAQGDASSSSSTAAAESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLPHR 817          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|585109411|gb|EWM27231.1| (Zinc finger, RING-type [Nannochloropsis gaditana])

HSP 1 Score: 1502.26 bits (3888), Expect = 0.000e+0
Identity = 737/737 (100.00%), Postives = 737/737 (100.00%), Query Frame = 0
Query:    1 MQAGGSDGLPGVAGRFGGSAEETRRRPATKTGAQVPGGMRLHHTEGRVDVQLFMNPVAGLTDLSLVHGYFKLLDGPFSSERDVFAVLKGVYLRRDGRLLLRTVSQKQAGTLGFAYTLPASSAKTFRAQGSDSDKPAGRATRTLGEPSQRLGGGEGVEGNPGDASDQASPSHMAANADTGLERRIAGVWGDVASYPDVEMRLDAVLREVAASAGTDLEDRAAGREAEEADVFFGMQLQADKKLDMDGADESEGAEVVGLTVLKGGALLAGMEEKAAPDGGLLETVLIPDRTKERYFRHQTSNGRRCVFTLDARSSPRLNASQVMGQTGAQGDASSSSSTAAAESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLPHR 737
            MQAGGSDGLPGVAGRFGGSAEETRRRPATKTGAQVPGGMRLHHTEGRVDVQLFMNPVAGLTDLSLVHGYFKLLDGPFSSERDVFAVLKGVYLRRDGRLLLRTVSQKQAGTLGFAYTLPASSAKTFRAQGSDSDKPAGRATRTLGEPSQRLGGGEGVEGNPGDASDQASPSHMAANADTGLERRIAGVWGDVASYPDVEMRLDAVLREVAASAGTDLEDRAAGREAEEADVFFGMQLQADKKLDMDGADESEGAEVVGLTVLKGGALLAGMEEKAAPDGGLLETVLIPDRTKERYFRHQTSNGRRCVFTLDARSSPRLNASQVMGQTGAQGDASSSSSTAAAESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLPHR
Sbjct:    1 MQAGGSDGLPGVAGRFGGSAEETRRRPATKTGAQVPGGMRLHHTEGRVDVQLFMNPVAGLTDLSLVHGYFKLLDGPFSSERDVFAVLKGVYLRRDGRLLLRTVSQKQAGTLGFAYTLPASSAKTFRAQGSDSDKPAGRATRTLGEPSQRLGGGEGVEGNPGDASDQASPSHMAANADTGLERRIAGVWGDVASYPDVEMRLDAVLREVAASAGTDLEDRAAGREAEEADVFFGMQLQADKKLDMDGADESEGAEVVGLTVLKGGALLAGMEEKAAPDGGLLETVLIPDRTKERYFRHQTSNGRRCVFTLDARSSPRLNASQVMGQTGAQGDASSSSSTAAAESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLPHR 737          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|1210517848|dbj|GAX23249.1| (hypothetical protein FisN_21Hh067 [Fistulifera solaris])

HSP 1 Score: 332.028 bits (850), Expect = 5.234e-97
Identity = 167/421 (39.67%), Postives = 247/421 (58.67%), Query Frame = 0
Query:  355 GTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVL---FLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVP----------------QGRGGRAQGPQ-----------PTVRAGGLVHTQS--------SGSSGGCEEIELMDLEEGP--GHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLP 735
            GT+ S  C+   ++++ A+R DW  A  KA+NYS ++ L+C+ Q+ +L RQ+  S+  +AA+RVS+LC+G Q +LDALLCI H+ +   +QPLF+AFAS+AFFKL+IF + +++YM II Q+R+S S      + LRRQ+A LH RFY VL   F+L F  Y   +Y  + +  L+SFW+PQI++N     + PL+ +Y+LGMS+ R+  PLY Y    NF+  ++     D   C+ LV+WVG Q AVL  Q   G ++MIPAR LPPK++Y RP+P                +    R   PQ           P+ R    + T++        S + G   E     L   P  G    ++  +   LEC+IC+  +D+ +   YM+APCNH+F RECL +WMD+K+ECP+CR +LP
Sbjct:  580 GTIHSRNCNFNATLNATALRTDWEAATSKAINYSFVMMLICLTQMLVLLRQVLHSQGVSAATRVSILCVGWQTLLDALLCIMHIYMSLSIQPLFSAFASVAFFKLLIFCVIQMKYMAIIIQARNS-SNGGQPVDVLRRQIALLHLRFYTVLAGTFVLFF--YVNDKYRALYILALFSFWIPQIILNIYTEAKTPLHNSYILGMSVTRIFAPLYYYALQSNFLKEVYPEAPHDTFTCYLLVLWVGLQTAVLYGQRKYGARFMIPARCLPPKFDYSRPIPASMLPPGALDPHVPATEAMEDRDAAPQFSIEQSLSSDSPSGRHKTAMTTRNRMRGNRAISRAEGMTTEQHTTGLNGSPLVGSTAVSNAIQVHGLECSICYEGIDIQKRSEYMLAPCNHLFHRECLVQWMDVKMECPICRTNLP 997          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|219124448|ref|XP_002182515.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405861|gb|EEC45802.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 332.028 bits (850), Expect = 4.233e-95
Identity = 175/414 (42.27%), Postives = 244/414 (58.94%), Query Frame = 0
Query:  349 LADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQ-YLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGR--GGRAQGPQPTV------RAGGLVHTQSSGSSGGCEEIE------------LMDLEEGPGHGGEA------DGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLP 735
            L     G++ SP CD   +++  AIR DW     K +NYS  + LVC+ QI LL RQL  S+ Q+AA RVS+LCIG QA++DAL+C+ H+     +QPLF AFAS+AFFKL+IF + E++YM II Q+R+S S    S   LRRQ+A LH RFY  LF    +++++ + Y    V  LYSFWVPQI++N     + PL++ ++ GMSL+RL  PLYV+G P NF+  I +    D  LC  LV+WVG QVA+L SQ   G ++MIPARFLPPK++Y RP+P      G  + P P +          LV +    SS   + +               +  E  G   E       +      L+C+IC++ ++V     YM+APCNH+F R+CL +WMD+K+ECP+CR  LP
Sbjct:  934 LVMNMAGSIHSPNCDFTATLNVTAIRTDWEATTGKVINYSFYMMLVCMAQIILLLRQLLHSQAQSAAVRVSMLCIGWQAVIDALVCLVHIYFSLAMQPLFTAFASVAFFKLLIFCVIEMKYMSIIIQARNS-SNGGQSTEVLRRQVAMLHLRFYLALFAAFLMLFYMGEKYRTFYVLGLYSFWVPQIILNIITEAKNPLHKYFINGMSLSRLVAPLYVFGVPNNFLKEIHADAPTDAWLCQLLVLWVGVQVAILHSQSKYGTRFMIPARFLPPKFDYSRPIPSSMLPPGALESPVPELALERNSENQPLVTSSPDTSSPARDRLRHTTAVTTRNRMRRTNRTESSGMTTETLDHSRCNSPLAPTLDCSICYDAINVRDQLGYMLAPCNHLFHRDCLIQWMDVKMECPICRTELP 1346          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|1210514491|dbj|GAX26600.1| (hypothetical protein FisN_21Lh067 [Fistulifera solaris])

HSP 1 Score: 326.635 bits (836), Expect = 6.227e-95
Identity = 168/430 (39.07%), Postives = 245/430 (56.98%), Query Frame = 0
Query:  355 GTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVL---FLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPV---------------------------------------PQGRG-------GRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLP 735
            GT+ S  C+   ++++ A+R DW  A  KA+NYS ++ L+C+ Q+ +L RQ+  S+  +AA+RVS+LC+G Q +LDALLCI H+ +   +QPLF+AFAS+AFFKL+IF + +++YM II Q+R+S S      + LRRQ+A LH RFY VL   F+L F  Y   +Y  + +  L+SFWVPQI+MN     + PL+ +Y+LGMS++RL  PLY +    NF+  ++     D   C  LV+WVG Q AVL  Q   G ++MIPAR LPPK++Y RP+                                       P GR         R +G +   RA G++ T+   +  G     L+       +     G     LEC+IC+  +D+ +   YM+APCNH+F RECL +WMD+K+ECP+CR +LP
Sbjct:  590 GTIHSTNCNFTAALNATALRTDWETATSKAINYSFVMMLICLTQMLVLLRQVLHSQGVSAATRVSILCVGWQTLLDALLCIMHIYMSLSIQPLFSAFASVAFFKLLIFCVIQMKYMAIIIQARNS-SNGGQPMDVLRRQIALLHVRFYTVLAGTFVLFF--YVNDKYRALYILALFSFWVPQIIMNIYTEAKTPLHNSYILGMSISRLFAPLYFFAIRNNFLKEVYPEAPHDTFTCNLLVLWVGLQTAVLYGQRKYGARFMIPARCLPPKFDYSRPIPASMLPPGALDPHVPATESMEDRDAAPHYSIEQSLSSGPPSGRHKTAMTTRNRMRGNRAVSRAEGVMTTEQHRT--GLNGSPLVGSTTAVSNASLVHG-----LECSICYEGIDIQKRSEYMLAPCNHLFHRECLVQWMDVKMECPICRTNLP 1009          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|325184305|emb|CCA18796.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 307.76 bits (787), Expect = 4.460e-90
Identity = 163/407 (40.05%), Postives = 235/407 (57.74%), Query Frame = 0
Query:  332 ASSSSSTAAAESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIH---LIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLP 735
             S       AE+   +  +  F GTL S  C + LS+     + +  + + KA +Y+I++TLV + +I  + RQL  S TQA A++VSLL IGQQAILD+ LC+AHL +  + Q +F  FAS+AF KL+IFS+FE+RY+ +I ++R  Q   +  +  LRR+L  L++RFY  L L L   Y  + YL +LVF+ YSFW+PQIV NA + +R P +  Y+ GMS  R+ IPLY YGCP+NF+    ++ + + P Y  C  L +W+  QV +L  Q  LGPQ+ IPARFLP KYNY R +              ++   LV +  +G+                         E   ++C IC  ++D +    YM+APC+HVF RECL+ WM +K+ECP CRC+LP
Sbjct:  382 TSKQHKNGDAETYEDMLRSMQFYGTLASENCGLYLSLKVSFEKKNLDKFFSKASHYAILMTLVSMAEIYFVLRQLQASSTQATATKVSLLTIGQQAILDSYLCLAHLTVGIIAQNVFTPFASVAFIKLIIFSVFEMRYLLVIWKARRPQ-GFSEGWIILRRELTTLYSRFYLSLLLGLVAFYNFSDYLPLLVFISYSFWIPQIVHNAFREVRNPFHAGYLYGMSALRMFIPLYFYGCPDNFLTEFPMLETKWNPSY--CLGLTLWMAFQVGILTLQHRLGPQFFIPARFLPVKYNYERRL-------------DIQQVSLVVSNDAGNG------------------------EVNTIDCVICMVELD-SEARDYMLAPCDHVFHRECLQNWMQVKMECPTCRCALP 747          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|698789688|ref|XP_009827876.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574116724|gb|ETV82207.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 291.197 bits (744), Expect = 9.980e-85
Identity = 149/374 (39.84%), Postives = 223/374 (59.63%), Query Frame = 0
Query:  362 CDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLP 735
            C +    ++  +  ++   Y KA  Y+I++ L+C++QI +L +QL  S TQAAA++VSL+ +G QA++D+ LC+ HL    V Q +F  FA+++FF+L+IFSIFE+R++ +I ++R         +N +RR+L  L++RFY  L + L ++Y+  Q+L VLVFV  SFWVPQIV N  + +R PL   Y+ GMS  RL +PLYV+GCP+NF+  +   Y P+  +C ALV+W+GAQV VLL Q Y GP++ +PA FLP KYNY R +                                +++ L+ L             +G  L+C IC  ++D+     YM+APC+HVF R CL+ WM +K+ECP CR  LP
Sbjct:  336 CGLYWRANATFVEENFNTFYTKASGYAILMALLCLVQIYVLLKQLQLSSTQAAAAKVSLVTVGMQAVVDSYLCLLHLTTGIVAQHIFTLFATVSFFQLIIFSIFEMRFLLVIWKARRPHQFTE-GWNIMRRELTTLYSRFYISLLVGLCVIYYGWQWLHVLVFVASSFWVPQIVHNVHREVRNPLENGYICGMSATRLFLPLYVFGCPKNFLSAM-PIYHPN--VCIALVLWMGAQVGVLLLQRYWGPRFFVPAMFLPVKYNYERRM------------------------------DADQLSLLRL------------NQGDELDCVICMVELDL-EARDYMIAPCDHVFHRPCLQEWMQVKMECPTCRSVLP 662          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|698789686|ref|XP_009827875.1| (hypothetical protein H257_04916 [Aphanomyces astaci] >gi|574116723|gb|ETV82206.1| hypothetical protein H257_04916 [Aphanomyces astaci])

HSP 1 Score: 290.426 bits (742), Expect = 2.440e-84
Identity = 151/377 (40.05%), Postives = 224/377 (59.42%), Query Frame = 0
Query:  362 CDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHL--IFS-GYRPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLP 735
            C +    ++  +  ++   Y KA  Y+I++ L+C++QI +L +QL  S TQAAA++VSL+ +G QA++D+ LC+ HL    V Q +F  FA+++FF+L+IFSIFE+R++ +I ++R         +N +RR+L  L++RFY  L + L ++Y+  Q+L VLVFV  SFWVPQIV N  + +R PL   Y+ GMS  RL +PLYV+GCP+NF+    IF   Y P+  +C ALV+W+GAQV VLL Q Y GP++ +PA FLP KYNY R +                                +++ L+ L             +G  L+C IC  ++D+     YM+APC+HVF R CL+ WM +K+ECP CR  LP
Sbjct:  336 CGLYWRANATFVEENFNTFYTKASGYAILMALLCLVQIYVLLKQLQLSSTQAAAAKVSLVTVGMQAVVDSYLCLLHLTTGIVAQHIFTLFATVSFFQLIIFSIFEMRFLLVIWKARRPHQFTE-GWNIMRRELTTLYSRFYISLLVGLCVIYYGWQWLHVLVFVASSFWVPQIVHNVHREVRNPLENGYICGMSATRLFLPLYVFGCPKNFLSAMPIFPLQYHPN--VCIALVLWMGAQVGVLLLQRYWGPRFFVPAMFLPVKYNYERRM------------------------------DADQLSLLRL------------NQGDELDCVICMVELDL-EARDYMIAPCDHVFHRPCLQEWMQVKMECPTCRSVLP 666          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|301102873|ref|XP_002900523.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262101786|gb|EEY59838.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 290.041 bits (741), Expect = 6.142e-84
Identity = 175/485 (36.08%), Postives = 260/485 (53.61%), Query Frame = 0
Query:  253 AEVVGLTVLKGGALLAGMEEKAAPDGGLLETVLIPDRTKERYFRHQTSNGRRCVFTLDARSSPRLNASQVMGQTGAQGDASSSSSTAAAESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGY--RPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLP 735
            AE++ L VL G   +   +E AA D      +  P  +    FR   S   +CV  ++      +N +    + G + +    ++T   +S   ++L    EGTL S  C + L + +     +    + KA  Y++I+T + + +I  L RQL  S TQA A++VSLL IGQQAI+D+ LC+ HL +  V Q +FAAFAS+AF KL+IFS+FE+RY+ II ++R  Q   +  +  LRR+L  L++RFY  L   L + Y  + +L VLVF+ YSFWVPQIV N  + +R P +  Y+ G+S  RL +PLY YGCP+NF+   F  Y  + +   C+ L  WVG QV  L  Q   GP++ +PARFLP KYNY R +                                +++ L+            DG+   +++C IC  ++++     YMVAPC+H+F RECL+ WM +K+ECP CR  LP
Sbjct:  274 AELMNLGVLDGVPAVDNRDEYAAVD------ISPPRYSYVSRFRSSDSFSDQCVSIVEMS---LVNDTSKPARKGGEDEEDDDAATVLQKSMRHMKL----EGTLASVNCGLYLKLDTTFQEENLNVFFAKASRYAVIMTFIAMTEIYFLLRQLQISSTQATAAKVSLLTIGQQAIVDSYLCLGHLTVGIVAQNVFAAFASVAFVKLIIFSVFEMRYLLIIWKARRPQ-GFSEGWLTLRRELTTLYSRFYLSLLAGLCIFYNFSNHLPVLVFICYSFWVPQIVHNVHREVRNPFDLGYLYGISALRLFLPLYFYGCPDNFL-TAFPMYESKINPHFCYVLAAWVGLQVGFLALQQRYGPRFFVPARFLPVKYNYERRI------------------------------NLQQLALL-----------KDGD--NSIDCVICMVELEI-EARDYMVAPCDHIFHRECLQGWMQVKMECPTCRHVLP 699          
BLAST of EWM27231.1 vs. NCBI_GenBank
Match: gi|695441519|ref|XP_009533229.1| (hypothetical protein PHYSODRAFT_519898 [Phytophthora sojae] >gi|348670663|gb|EGZ10484.1| hypothetical protein PHYSODRAFT_519898 [Phytophthora sojae])

HSP 1 Score: 289.656 bits (740), Expect = 1.101e-83
Identity = 155/385 (40.26%), Postives = 222/385 (57.66%), Query Frame = 0
Query:  353 FEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIALLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLVIFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLEVLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGY--RPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQPTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRLGSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLP 735
             EGTL S  C + L + +     +    + KA  Y++I+T + + +I  L RQL  S TQA A++VSLL IGQQAI+D+ LC+ HL +  V Q +FAAFAS+AF KL+IFS+FE+RY+ II ++R  Q   +  +  LRR+L  L++RFY  L   L + Y  + +L VLVF+ YSFWVPQIV N  + +R P +  Y+ G+S  RL +PLY YGCP+NF+   F  Y  + D   C+ L VW+G QV +L  Q   GP++ +PARFLP KYNY R +                                +++ L+            DG+   +++C IC  ++D+     YM+APC+H+F RECL+ WM +K+ECP CR  LP
Sbjct:  372 LEGTLASVNCGLYLKLDTTFQEENLNVFFAKASRYAVIMTFIAMAEIYFLLRQLQISSTQATAAKVSLLTIGQQAIVDSYLCLGHLTVGIVAQNVFAAFASVAFVKLIIFSVFEMRYLLIIWKARRPQ-GFSEGWLTLRRELTTLYSRFYLSLLAGLCIFYNFSNHLPVLVFICYSFWVPQIVHNVHREVRNPFDLGYLYGISALRLFLPLYFYGCPDNFL-TAFPMYESKIDPHFCYVLAVWMGLQVGILALQQRYGPRFFVPARFLPVKYNYERRI------------------------------NLQQLALLK-----------DGD--NSIDCVICMVELDI-EARDYMIAPCDHIFHRECLQGWMQVKMECPTCRHVLP 710          
The following BLAST results are available for this feature:
BLAST of EWM27231.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553190835|ref|XP_005855273.1|0.000e+0100.00hypothetical protein NGA_0075710 [Nannochloropsis ... [more]
gi|585109411|gb|EWM27231.1|0.000e+0100.00Zinc finger, RING-type [Nannochloropsis gaditana][more]
gi|1210517848|dbj|GAX23249.1|5.234e-9739.67hypothetical protein FisN_21Hh067 [Fistulifera sol... [more]
gi|219124448|ref|XP_002182515.1|4.233e-9542.27predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210514491|dbj|GAX26600.1|6.227e-9539.07hypothetical protein FisN_21Lh067 [Fistulifera sol... [more]
gi|325184305|emb|CCA18796.1|4.460e-9040.05conserved hypothetical protein [Albugo laibachii N... [more]
gi|698789688|ref|XP_009827876.1|9.980e-8539.84hypothetical protein, variant 1 [Aphanomyces astac... [more]
gi|698789686|ref|XP_009827875.1|2.440e-8440.05hypothetical protein H257_04916 [Aphanomyces astac... [more]
gi|301102873|ref|XP_002900523.1|6.142e-8436.08conserved hypothetical protein [Phytophthora infes... [more]
gi|695441519|ref|XP_009533229.1|1.101e-8340.26hypothetical protein PHYSODRAFT_519898 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3461rna3461Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications