EWM27168.1, cds3447 (CDS) Nannochloropsis gaditana

Overview
NameEWM27168.1
Unique Namecds3447
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:454810..456771 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27168.1
Productlamin-b receptor
Orig transcript idgnl|cribi|Naga_100010g9.6138.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:454810..456771 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016628oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018083Sterol_reductase_CS
IPR001171Ergosterol_biosynth_ERG4_ERG24
Homology
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|585109348|gb|EWM27168.1| (lamin-b receptor [Nannochloropsis gaditana])

HSP 1 Score: 1335.47 bits (3455), Expect = 0.000e+0
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0
Query:    1 MVSTRRRRSPGSKKENAATAPEIRTVRRRTVAAVTSSGTDNIPLTPTSKILGSPPRKKAPKSRSIDSPLSEEDNAPTRPKATRKKPMSKALSASAPSHPPEAVASSFKYEFGGPWGALGIVVGLPVVVMGLYYFCPNFMSSASPSSSSSKYPLSFRSSTSPLACLRWTDMAHFLTSTLPALLRALPSTFSTFALQARRSPHNTASAFMAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 653
            MVSTRRRRSPGSKKENAATAPEIRTVRRRTVAAVTSSGTDNIPLTPTSKILGSPPRKKAPKSRSIDSPLSEEDNAPTRPKATRKKPMSKALSASAPSHPPEAVASSFKYEFGGPWGALGIVVGLPVVVMGLYYFCPNFMSSASPSSSSSKYPLSFRSSTSPLACLRWTDMAHFLTSTLPALLRALPSTFSTFALQARRSPHNTASAFMAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY
Sbjct:    1 MVSTRRRRSPGSKKENAATAPEIRTVRRRTVAAVTSSGTDNIPLTPTSKILGSPPRKKAPKSRSIDSPLSEEDNAPTRPKATRKKPMSKALSASAPSHPPEAVASSFKYEFGGPWGALGIVVGLPVVVMGLYYFCPNFMSSASPSSSSSKYPLSFRSSTSPLACLRWTDMAHFLTSTLPALLRALPSTFSTFALQARRSPHNTASAFMAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 653          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|553190838|ref|XP_005855274.1| (D14-sterol reductase [Nannochloropsis gaditana CCMP526] >gi|422293799|gb|EKU21099.1| D14-sterol reductase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0
Identity = 398/446 (89.24%), Postives = 398/446 (89.24%), Query Frame = 0
Query:  208 MAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 653
            MAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTI                                                LYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY
Sbjct:    1 MAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTI------------------------------------------------LYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 398          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|223994999|ref|XP_002287183.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976299|gb|EED94626.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 444.891 bits (1143), Expect = 1.667e-147
Identity = 255/552 (46.20%), Postives = 321/552 (58.15%), Query Frame = 0
Query:  105 SSFKYEFGGPWGALGIVVGLPVVVMGLYYFCPNFMSSASPSSSSSKYPLSFRSSTSPLACLRWTDMAHFLTSTLPALLRALPSTFSTFALQARRSPHNTASAFMAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQ-QQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTS--VPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 653
             SF YEFGGP G L  ++ LP++ + L ++                            A +   +  H L S+  + +  LPS  +TF   +   P   +   + I+Q           ALV               I+ WF FQV LER+LP E  +G PL G  G RLPY++NGHLAFW++LL+L    PR+ V V D                               G A++  +        FG  PL  LYDH P  AF  ++++  LS  L+L SF KG  LA GG SGN  YDF+MGRELNPR G+FDWK FCELRPGLIGW+ LN+ M+ KQ ++L  VTG      ++L+N FQG YV DAL  ERAILTTMDITTDGFGFML FGDLAWVPFTYSLQ+RYLV     LS   LA +  ++++GY IFR ANS KDAFRRDP S  V H+ ++ T RGTKL+ SGWWG ARKINYTGDW+M L+WC +CG   ++PY+YAIYF ILLVHR+ RDDH+C  KYG DW KYK  V + F+PG++
Sbjct:    6 DSFDYEFGGPLGTLATMIFLPLITLLLTHW----------------------------ASVGRLEFDHILPSSCSSSIVLLPSAINTFIHSSVLCP---SCIDVTILQ---------SCALV---------------ILLWFVFQVALERMLPCETVMGAPLPGGSGNRLPYRINGHLAFWVTLLVLDVAWPRW-VDVND----------------------------GKGGMASSVLV--------FGRAPLTWLYDHHPTLAFVTILWTLLLSTYLHLKSFGKGLLLAAGGNSGNPFYDFFMGRELNPRWGTFDWKEFCELRPGLIGWMILNLAMMSKQYERLGYVTGS-----MILINSFQGLYVWDALYQERAILTTMDITTDGFGFMLIFGDLAWVPFTYSLQSRYLVDHDPHLSWTTLAAIVGVNIIGYLIFRGANSQKDAFRRDPNSAEVSHLTFLQTKRGTKLLTSGWWGMARKINYTGDWIMGLSWCMVCGFESIVPYYYAIYFAILLVHRSIRDDHMCQEKYGDDWGKYKSIVPYRFIPGVF 460          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|219124907|ref|XP_002182735.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406081|gb|EEC46022.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 420.624 bits (1080), Expect = 5.353e-138
Identity = 227/415 (54.70%), Postives = 272/415 (65.54%), Query Frame = 0
Query:  242 IVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGAR-LADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQ-LQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPT--SVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGI 652
            +VAWF FQV+LER LP E+  G P+ G    RL Y++NGHLAFW++LLL VH     A PV D                                  AN A      L  F   PL  LY ++ + AF  ++ S   S  LYL SFR   + LADGG SGNV+YDF++GRELNPR+G+FDWK FCELRPGLIGWV LN+    +Q   L  VTG      ++LVNVF G YV DAL  ERAILTTMDITTDGFGFML FGDLAWVPFTYSLQARYLV    +LS  ALAG+ A+H++GY IFR AN  KDAFRR+PT  ++ H+ ++ T RGTKL+ SGWWG ARKINYTGDW+M L WC +CG    +PYFYA+YF ILLVHR+ RDDH+CS+KYG DW+ YK  V   F+PG+
Sbjct:  102 VVAWFLFQVLLERFLPCELVQGSPVKGDAKNRLTYRINGHLAFWVTLLL-VHA----AWPVWD----------------------------------ANAA------LYQFTTAPLATLYKYYTELAFVTILLSAMASTGLYLDSFRGQHKILADGGDSGNVLYDFFIGRELNPRIGTFDWKEFCELRPGLIGWVLLNIACAKQQYSVLGYVTGS-----MILVNVFHGIYVWDALYQERAILTTMDITTDGFGFMLLFGDLAWVPFTYSLQARYLVKHDPNLSAVALAGIVALHILGYLIFRGANGQKDAFRRNPTDPALSHLTFLQTKRGTKLLTSGWWGMARKINYTGDWIMGLTWCMVCGFDSAVPYFYAVYFFILLVHRSIRDDHMCSVKYGDDWETYKSIVPHRFVPGV 466          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|1210525445|dbj|GAX15788.1| (Delta14-sterol reductase [Fistulifera solaris])

HSP 1 Score: 404.831 bits (1039), Expect = 2.909e-132
Identity = 212/420 (50.48%), Postives = 263/420 (62.62%), Query Frame = 0
Query:  242 IVAWFCFQVVLERLLPGEVALGVPLLGAEGLR-------LPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPT--SVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGI 652
            +V WF FQV+LER+LP ++  G PL G    +       L Y++NGHLAFW++ L+L  G   + V  E+ G                                             F  FPL  LYD   + A    +  FGLSL LYL+SF    RLA  G SGNV+YDF+MGRELNPR+GSFDWK FCELRPGL+GW+ LN+    KQ+++Q       S  ++L+  FQG YV DAL  E AILTTMDITTDGFG+MLAFGDLAWVPFTY+LQARYLV     LS  AL  + A+H+VGY  FR AN  KD FRR+P   +V H+ Y+ T RGTKL+ SGWWG ARKINYTGDW+M L WC +CG   ++PYFYAIYF ILL+HR+ RDDH C  KYG+DW +YK++V + F+PG+
Sbjct:   61 LVTWFLFQVLLERMLPCKLVQGTPLQGVFVWKSISTKECLEYRINGHLAFWVTFLVLQTG---WIVKHEESGTWQ------------------------------------------FTSFPLSGLYDVTAELAVGTSILCFGLSLYLYLSSFIGNRRLAVPGTSGNVVYDFWMGRELNPRIGSFDWKEFCELRPGLMGWMILNLAYCQKQKEVQGYV----SMSMMLLQCFQGLYVWDALYQEEAILTTMDITTDGFGYMLAFGDLAWVPFTYTLQARYLVLHDPQLSVTALTAILALHIVGYVTFRGANGQKDIFRRNPEDPAVAHLTYLKTKRGTKLLTSGWWGMARKINYTGDWIMGLTWCMVCGFNSIVPYFYAIYFLILLIHRSIRDDHACQEKYGSDWDEYKRKVPYRFIPGL 431          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|397599315|gb|EJK57400.1| (hypothetical protein THAOC_22555 [Thalassiosira oceanica])

HSP 1 Score: 404.445 bits (1038), Expect = 8.985e-132
Identity = 225/414 (54.35%), Postives = 268/414 (64.73%), Query Frame = 0
Query:  242 IVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQ-QQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTS--VPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGI 652
            I+ WF FQV LER LP ++  G PL    G RL Y++NGHLA W++LLLL    P +             +G   D++ V                              FG  P   LYD++   A A ++++F LS  LYL SF KG  LA GG SG+  YDF++GRELNPR GSFDWK FCELRPGLIGW+ LN+ ML KQ ++L   TG      ++LVN+FQG YV DAL  E+AILTTMDITTDGFGFML FGDLAWVPFTYSLQARYLV     LS  ALA +  ++  GY IFR AN  KDAFRRDPTS  V H+++M T RGTKL+ SGWWG ARKINYTGDW+M L+WC LCG   V+PYFYAIYF ILLVHR+ RDDH+C  KYG DW+KYK  V + F PG+
Sbjct:   84 IMCWFLFQVGLERFLPCQLVDGAPLPDHSGRRLTYRINGHLALWMTLLLLDVAWPHW-----------IDIGSNEDQKTVLV----------------------------FGRAPFTWLYDNYSTLALATIIWTFFLSTYLYLKSFGKGLLLAAGGNSGSTAYDFFLGRELNPRWGSFDWKEFCELRPGLIGWMLLNISMLAKQYERLGYATGS-----MILVNLFQGVYVWDALYQEKAILTTMDITTDGFGFMLCFGDLAWVPFTYSLQARYLVDHDPHLSPPALAAILGVNCAGYLIFRGANGQKDAFRRDPTSPEVSHLQFMQTKRGTKLLTSGWWGLARKINYTGDWIMGLSWCMLCGFESVVPYFYAIYFAILLVHRSIRDDHMCKEKYGEDWEKYKDLVPYRFFPGV 453          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|1210525094|dbj|GAX16286.1| (Delta14-sterol reductase [Fistulifera solaris])

HSP 1 Score: 400.979 bits (1029), Expect = 7.945e-131
Identity = 215/431 (49.88%), Postives = 265/431 (61.48%), Query Frame = 0
Query:  235 DPLAFACIVA---WFCFQVVLERLLPGEVALGVPLLGAEGLR--------LPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPT--SVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGI 652
            D LA  CIV    WF FQV+LERLLP ++  G PL G    R        L Y++NGHLAFW++ L+L  G   + V  E+ G                                             F  FPL  LYD   + A    +  FGLS+ LYL SF    RLA  G SGNV+YDF+MGRELNPR+G+FDWK FCELRPGL+GW+ LN+    KQ+++        S  ++L+  FQG+YV DAL  E AILTTMDITTDGFG+MLAFGDLAWVPFTY+LQARYLV     LS  AL  +  +H+VGY  FR AN  KD FRR+P   +V H+ Y+ T RGTKL+ SGWWG ARKINYTGDW+M L WC +CG   ++PYFYAIYF ILL+HR+ RDDH C  KYG+DW +YK++V + F+PG+
Sbjct:   52 DTLA-KCIVGLVTWFLFQVLLERLLPCKLVQGTPLQGVFAARKSISTQECLEYRINGHLAFWVTFLVLQTG---WIVKHEESGTWQ------------------------------------------FTSFPLSGLYDVTAELALGTSILCFGLSVYLYLTSFIGNKRLAVPGTSGNVVYDFWMGRELNPRIGNFDWKEFCELRPGLMGWMILNLAYCQKQKEVLGYV----SMSMMLLQCFQGFYVWDALYQEEAILTTMDITTDGFGYMLAFGDLAWVPFTYTLQARYLVLHDPQLSITALLAILVLHIVGYVTFRGANGQKDIFRRNPEDPAVAHLTYLKTKRGTKLLTSGWWGMARKINYTGDWIMGLTWCMVCGFNSIVPYFYAIYFLILLIHRSIRDDHACQEKYGSDWDEYKRKVPYRFIPGL 432          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|298714492|emb|CBJ27514.1| (C-14 sterol reductase C14 Sterol reductase [Ectocarpus siliculosus])

HSP 1 Score: 401.749 bits (1031), Expect = 5.201e-130
Identity = 217/431 (50.35%), Postives = 272/431 (63.11%), Query Frame = 0
Query:  231 NELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFG--PFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADG----GRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDP--TSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 653
             +L+ P+AF  +  W  FQ++L+R+LPG+   GV L   +G RLPYK++GH AFW +L++   G                                                   L EL G G     L  LYD + + A A    SF LS+ L++AS RKGA+LAD     GRS   +YDFY+GRELNPR+G  D K FCELRPGL+GWV +N+GML+KQ++LQ       S  +++VNVFQG YV D L  ER+ILTTMDITT+GFGFMLAFGDL W+PFTYSLQA YLV     L  +A+A +S + LVGY IFR AN  KDAFRRDP  ++V H+++M T RGTKL+ SGWWG ARKINYTGDWLM LAWC   G +  +PYFY IYFG+LLVHRA RDDH C+ KYG DW  YK++V  LF+PG++
Sbjct:  134 GDLFSPVAFTIVSQWLLFQILLDRVLPGKTVEGVVL--QDGSRLPYKMSGHAAFWTTLVVTALG---------------------------------------------------LSELGGVGSTKLNLSALYDLYEELAVATATISFALSVGLFVASHRKGAKLADASGTVGRS--AIYDFYIGRELNPRIGPLDLKCFCELRPGLLGWVVINLGMLLKQRELQGYV----SASMIMVNVFQGLYVWDGLFFERSILTTMDITTEGFGFMLAFGDLCWLPFTYSLQAHYLVTNDPGLPLWAVAVISCLCLVGYAIFRGANGQKDAFRRDPNASAVSHLQWMPTKRGTKLLTSGWWGAARKINYTGDWLMGLAWCMFAGFSSPVPYFYCIYFGVLLVHRAMRDDHACAAKYGPDWSVYKQKVPSLFVPGLF 505          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|698819949|ref|XP_009843003.1| (hypothetical protein H257_16325 [Aphanomyces astaci] >gi|574101886|gb|ETV67444.1| hypothetical protein H257_16325 [Aphanomyces astaci])

HSP 1 Score: 370.548 bits (950), Expect = 9.206e-119
Identity = 205/428 (47.90%), Postives = 256/428 (59.81%), Query Frame = 0
Query:  231 NELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPVEDEGILPTIVGDEGDEQFVYTASAAGDAVLQHAGQAANGAIPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARL-ADGGRSGNVMYDFYMGRELNPRL---GSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDP--TSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGI 652
            ++L D  A A +  WF  QV+LERL+PGE   GV L   +  RL YK+NGH  FW+S+                                                     AI  +G L G  P  L   YDH+   A  A++ SF +S+ +Y+ SFR+   L A+ G S + +++F++GRELN R    G+FD KYFCELRPGLIGW  LN+GML KQ +L        S  +  V  FQ  YV DAL +E+ +LTTMDITTDGFG+MLAFGDL WVPFTYSLQARYLV R   LS   +A + A++++GY IFR AN+ KDAFR DP   SV H+++M T RGTKL+VSGWWG ARKINYTGDW M LAWC   G   ++PY+YAIYF ILLVHRA RDD  C  KYG DW  YK  V+ +F+PG+
Sbjct:   81 SDLVDAKAIAVVFGWFGLQVLLERLVPGEFHNGVVLPTKD--RLVYKVNGHTCFWLSM-----------------------------------------------------AIVAIGHLQGVAP--LTYAYDHYLHLAVGAILLSFLISVFVYVVSFRRPDVLCAEQGTSPSAVFNFFIGRELNFRTQSTGTFDLKYFCELRPGLIGWAVLNLGMLAKQLELHGTV----SHSMACVVFFQLLYVWDALWHEKCVLTTMDITTDGFGYMLAFGDLTWVPFTYSLQARYLVDRDPQLSVPVIAAIVALNMLGYAIFRGANAQKDAFRTDPHGDSVKHLKWMPTKRGTKLLVSGWWGLARKINYTGDWCMGLAWCAYTGSASIMPYYYAIYFAILLVHRAVRDDTSCREKYGDDWTTYKTHVQAVFVPGV 447          
BLAST of EWM27168.1 vs. NCBI_GenBank
Match: gi|1133492545|ref|XP_019862998.1| (PREDICTED: lamin-B receptor-like, partial [Amphimedon queenslandica])

HSP 1 Score: 360.533 bits (924), Expect = 2.353e-115
Identity = 179/296 (60.47%), Postives = 210/296 (70.95%), Query Frame = 0
Query:  360 LYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPT--SVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 653
            +Y H+  F  +AV+ SF LS+ LY  SFR  A LA GG SGN  YDF++GRELNPR+G+FDWK+FCELRPGLIGW  +N  ML  Q +   V        ++LV VFQ WYV DALL E AILTTMDI  DGFGFMLAFGDLAWVPFTYSLQARYLV  P  LS +ALAG+ A+ L GY+IFR +NS KD FRRDP   SV + + + T RGT+L++SGWWG  R  NY GD +MAL+WC  CG  HVLPYFY IYF +LL+HR  RD+  C  KYG DW +Y   VKW  LPGIY
Sbjct:  119 IYHHYLSFVTSAVLLSFILSIYLYARSFRSSALLALGGNSGNFFYDFFIGRELNPRIGAFDWKFFCELRPGLIGWTLINYCMLAAQWEKHGVVSNS----MILVCVFQAWYVFDALLFEEAILTTMDIAHDGFGFMLAFGDLAWVPFTYSLQARYLVDHPNHLSWWALAGIVALKLCGYYIFRSSNSQKDQFRRDPFHPSVKNFKTLPTKRGTRLLLSGWWGICRHPNYVGDLMMALSWCLPCGFNHVLPYFYFIYFAVLLIHRQLRDEDNCRGKYGDDWTRYCNIVKWRLLPGIY 410          
The following BLAST results are available for this feature:
BLAST of EWM27168.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109348|gb|EWM27168.1|0.000e+0100.00lamin-b receptor [Nannochloropsis gaditana][more]
gi|553190838|ref|XP_005855274.1|0.000e+089.24D14-sterol reductase [Nannochloropsis gaditana CCM... [more]
gi|223994999|ref|XP_002287183.1|1.667e-14746.20predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|219124907|ref|XP_002182735.1|5.353e-13854.70predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210525445|dbj|GAX15788.1|2.909e-13250.48Delta14-sterol reductase [Fistulifera solaris][more]
gi|397599315|gb|EJK57400.1|8.985e-13254.35hypothetical protein THAOC_22555 [Thalassiosira oc... [more]
gi|1210525094|dbj|GAX16286.1|7.945e-13149.88Delta14-sterol reductase [Fistulifera solaris][more]
gi|298714492|emb|CBJ27514.1|5.201e-13050.35C-14 sterol reductase C14 Sterol reductase [Ectoca... [more]
gi|698819949|ref|XP_009843003.1|9.206e-11947.90hypothetical protein H257_16325 [Aphanomyces astac... [more]
gi|1133492545|ref|XP_019862998.1|2.353e-11560.47PREDICTED: lamin-B receptor-like, partial [Amphime... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3456rna3456Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications