EWM27209.1, cds3441 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|585109389|gb|EWM27209.1| (pre-rrna-processing protein tsr1 [Nannochloropsis gaditana]) HSP 1 Score: 947.192 bits (2447), Expect = 0.000e+0 Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0
Query: 1 MSEYQASWFEGEEEEGQNDEGGEEEEGEEEEGEEEEGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP 465
MSEYQASWFEGEEEEGQNDEGGEEEEGEEEEGEEEEGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP
Sbjct: 1 MSEYQASWFEGEEEEGQNDEGGEEEEGEEEEGEEEEGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP 465
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|553190805|ref|XP_005855264.1| (pre-rrna-processing protein tsr1 [Nannochloropsis gaditana CCMP526] >gi|422293789|gb|EKU21089.1| pre-rrna-processing protein tsr1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 936.791 bits (2420), Expect = 0.000e+0 Identity = 461/466 (98.93%), Postives = 461/466 (98.93%), Query Frame = 0
Query: 1 MSEYQASWFEGEEEEGQNDEGGEEEEGEEEEGEEE-EGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP 465
MSEYQASWFEGEEEEGQNDEGGEEEEGEEEEG GEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP
Sbjct: 460 MSEYQASWFEGEEEEGQNDEGGEEEEGEEEEGGGGGRGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP 925
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|553181644|ref|XP_005853601.1| (ribosome biogenesis protein [Nannochloropsis gaditana CCMP526] >gi|422295463|gb|EKU22762.1| ribosome biogenesis protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 879.396 bits (2271), Expect = 0.000e+0 Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0
Query: 36 EGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP 465
EGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP
Sbjct: 4 EGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEIEEDGAHAAHFP 433
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|298713556|emb|CBJ27084.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 388.267 bits (996), Expect = 2.030e-123 Identity = 217/470 (46.17%), Postives = 286/470 (60.85%), Query Frame = 0
Query: 2 SEYQASWFEGEEE-EGQNDEGGEEEEGEEEEGEEEEGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLL----ATLLPPPASSATKKKDGEDDSGMEVEDEK-----------SSDKFSEGFVPAGSYVTLELGGVPAEV-GKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEEI 454
S YQA W EG +G+N+EG +EGE +E++ ++E + D +L RQV E ++ FPDEV TP DR A+ERFAR+RALKS RTSPWDP ESLP++YARIF+F F A V E E+ QN++LL + SS G +GM+V+ ++D+ +V +G YV + + VP +V KR + L ++ PL +FSLLR+E+++S LHFNI R P+ SK+ L+F GFR +EARPVFS+ NLNCDKHK+ RFL RF+ A+V+GP + P PVLVF+ E T + RT LVATGTL VDPDRI+LK+I+LTGYPIRV++R AVVKHMF+ P DVKWFKPAEL TK G GHI+EPVGTHGLMKV FN+ ++Q+DTVCL L+KRV+PK++ E+
Sbjct: 409 SGYQAEWLEGAGSVDGENEEG--SDEGEAWAFDEKDDDDESVDPMDATLDAAR------RQV--AENEDTRFPDEVDTPADRSARERFARFRALKSFRTSPWDPKESLPKDYARIFQFEDFPAMQKDVLRAGEAMERQQNQNLLEVKEGSERGSRRSSFASSVVGTCGAGMDVDSAADQDLTDPSGVLAADQDRVSYVQSGQYVEVVIDSVPLDVLEKRKELLGGRDWPLVLFSLLRHEHRLSALHFNINRDARFVEPIPSKEPLIFQCGFRRWEARPVFSQINLNCDKHKYERFLRQDRFSAASVYGPTTFQPSPVLVFK--------EVAATGSNAKRT-----------------------VLVATGTLLGVDPDRIVLKKIVLTGYPIRVRKRKAVVKHMFHRPGDVKWFKPAELVTKYGLTGHIKEPVGTHGLMKVIFNKAVKQNDTVCLNLYKRVYPKMVAGEV 837
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|356508752|ref|XP_003523118.1| (PREDICTED: pre-rRNA-processing protein TSR1 homolog [Glycine max] >gi|734406038|gb|KHN33807.1| Pre-rRNA-processing protein TSR1 like [Glycine soja] >gi|947112644|gb|KRH60946.1| hypothetical protein GLYMA_04G018100 [Glycine max]) HSP 1 Score: 340.502 bits (872), Expect = 1.745e-105 Identity = 193/472 (40.89%), Postives = 258/472 (54.66%), Query Frame = 0
Query: 2 SEYQASWF--EGEEEE----GQNDEGGEEEEGEE----EEGEEEEGEEEGEE----EEDPSLSIGSEQQRQGRQVRQLEKDEL-----------EFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPK 448
SEYQA+W + +EEE +ND+G +EGE+ +E + + +G + D I S R+ +DEL EFPDEV TP D PA++RFA+YR LKS RTS WDP ESLP++YARIF+F +F K +H+LA +E++ E D +P GSY L + GVP+ V + L AK P+T LL++E+KVSVLHF++ +H P+KSK+ L+F+ GFR F RP+FS +N DK+K RFLH GRF+VA+++ P+S PP P ++ +++ D PA A V G+L TVD DRIILKR++LTGYP RV +R A V+HMFYNPEDVKWFKP EL TK G G I+EPVGTHG MK N +++Q DTVC+ LFKR +PK
Sbjct: 386 SEYQAAWIVDDSDEEESDCDNENDDGMVLDEGEDGFPGQENRYSDFDGDGASLRLGDSDEETDIDSVMMEVDNLTREKIEDELKELKEAHAADEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPQDYARIFEFDNF---------------KRTQKHVLA-------------------KALELDQENRED-----CIPVGSYARLHIMGVPSAVASKLS-LLAKTIPVTACGLLKHESKVSVLHFSVKKHETYDAPIKSKEELIFHVGFRQFVGRPIFSSEFINTDKNKMERFLHAGRFSVASIYAPISFPPLPTIILKRAGEDAA--------------------PAVAAV---------------GSLKTVDADRIILKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFKPVELYTKRGLRGRIKEPVGTHGTMKCLLNGVLEQRDTVCMNLFKRAYPK 782
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|1201320717|gb|OVA19550.1| (Ribosome biogenesis protein BMS1/TSR1 [Macleaya cordata]) HSP 1 Score: 340.117 bits (871), Expect = 2.325e-105 Identity = 184/476 (38.66%), Postives = 270/476 (56.72%), Query Frame = 0
Query: 2 SEYQASWF-----------EGEE----EEGQNDEGGEEEEGEEEEGEE----EEGEEEGEEEEDPSLSIGSEQQRQG-----RQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKLLPEE 453
S+YQA+WF G++ +EG ND G ++ + ++ G+ +GE E D ++ G + ++ R++++ ++ EFPDEV TP D PA++RFA+YR LKS RTS WDP ESLP EYAR+F+F +F+ + V ++ + E+ L PAGSYV L + VP +V + + LQ K+ P+ V LL++E+K+SVLHF+I +H + P+KSK+ L+F+ GFR F RP+FS +N +KHK RFLH GRF++A+++ PVS PP P++V + G G VV+P + A G+L ++DPDRIILK+I+LTGYP RV ++ A+V++MF+NP+DV+WFKP E+ +K G G ++EPVGTHG MK FN ++QQ DTVC+ LFKRVFPK PE+
Sbjct: 385 SKYQAAWFGDDDVDDEDSENGDDGMVLDEGDNDSPGLQDNNHWDSHDDGTSLNSGDSDGETEADTMMTDGEQLTKEQIEDEIRKIKEAHAEDEEFPDEVDTPTDVPARDRFAKYRGLKSFRTSSWDPKESLPPEYARLFEFVNFSRTQKGVLAKALDMEQGSMDECL---------------------------------------PAGSYVRLHVKEVPIDVASKLRELQ-KKLPVLVCGLLQHESKMSVLHFSIKKHDTYNAPIKSKETLIFHVGFRQFVVRPIFSSDAINSNKHKMERFLHAGRFSMASIYAPVSFPPLPLVVLK--------------------SGEGE-------VVKP-------AVAAVGSLRSIDPDRIILKKIILTGYPQRVSKKKAIVRYMFHNPQDVRWFKPVEVWSKCGRRGRVKEPVGTHGAMKCIFNGVVQQHDTVCMTLFKRVFPK-WPEQ 785
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|502131129|ref|XP_004500884.1| (PREDICTED: pre-rRNA-processing protein TSR1 homolog [Cicer arietinum]) HSP 1 Score: 338.576 bits (867), Expect = 1.040e-104 Identity = 195/473 (41.23%), Postives = 262/473 (55.39%), Query Frame = 0
Query: 2 SEYQASWFEGEEEEGQNDEGGEEEEGEEEEGEEEEGEEEGE-----------------EEEDPSLSIGSEQQRQGRQVRQLEKDEL--------EFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPKL 449
SEYQA+WF E +E ++D E++ +E E+E +EG +EE + S+ E R+ Q E EL EFPDEV TP D PA++RFA+YR LKS RTS WDP ESLP++YA+IF+F +F K +++LA L + DGE+ E +P GSYV L + VP+ V + L A +P+T L++ E+K+SVLHF++ +H P+KSK+ L+F+ GFR F RP FS +N +K+K RFLH GRF+VAT++ P+S+PP P +V ++ +GE+ +PA A V G+L TVDPDRIILKR++LTGYP RV +R A VKHMFYNPEDVKWFKP EL TK G G I+EPVGTHG MK N +++Q DTVCL L+KR +PK
Sbjct: 385 SEYQAAWFNDEPDEEESDCDNEDDGMLLDEIEDEFPGQEGNMYLDADGDEASQRFGDSDEETDNDSVMMEVDNMTREKIQDELKELKEAHGADEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPQDYAKIFEFGNF---------------KRLQKYVLAKAL---------ELDGEN---------------REDCIPVGSYVRLHIKEVPSAVALKLCML-ANTTPVTACGLMKEESKLSVLHFSVKKHETYDAPIKSKEELIFHVGFRQFVGRPTFSSEFINTNKNKMERFLHAGRFSVATIYAPISLPPLPTIVLKR-----IGEDA---------------VPAVAAV---------------GSLKTVDPDRIILKRVILTGYPQRVSKRKASVKHMFYNPEDVKWFKPVELYTKRGLRGRIKEPVGTHGAMKCLLNGVLEQRDTVCLNLYKRAYPKF 782
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|595852682|ref|XP_007210358.1| (pre-rRNA-processing protein TSR1 homolog [Prunus persica] >gi|1139774633|gb|ONI09105.1| hypothetical protein PRUPE_5G218100 [Prunus persica]) HSP 1 Score: 337.806 bits (865), Expect = 2.040e-104 Identity = 187/474 (39.45%), Postives = 259/474 (54.64%), Query Frame = 0
Query: 2 SEYQASWF-EGEEEEGQNDEGGEEEEG---------------------EEEEGEEEEGEEEGEEEEDPSLSIGSEQQRQG-----RQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPK 448
SEYQA+W +G +EEG + + EE +G +++ G +GE + D + G ++ ++++Q D+ EFPDEV TP D PA++RFA+YR LKS RTS WDP ESLP EYARIF F +F + V ++ + E+ QNR AT A SY L + VP V + QAK P+T LL++E+K+SVLHF++ +H + S P+K+KD L+F+ GFR F ARP++S N+N DKHK RFLH GRF++A+++ P+S PP P++ R S G+G+ PA A V GTL ++DPDRIILK+I LTGYP RV + A V++MF+NPEDVKWFKP E+ TK G G I+EP+GTHG +K FN ++QQ DTVC+ L+KR +PK
Sbjct: 385 SEYQAAWIVDGTDEEGSSTDEDEEADGMVLDEGDIGYPGQEGTKYSDLSDDQASLSFGNSDGETDVDSVMMEGENLTKEQLANEIQKIKQAHADDEEFPDEVDTPLDIPARKRFAKYRGLKSFRTSTWDPKESLPLEYARIFAFDNFNRTQKNVLAKALDMEQ-QNRDDCAT--------------------------------------ASSYARLYIKDVPTSVASKLCN-QAKTMPVTACGLLQHESKMSVLHFSVKKHDSYSAPIKAKDELIFHVGFRQFIARPIYSTDNMNSDKHKMERFLHAGRFSMASIYAPISFPPLPLIALRSSE------------------GAGT-APAVAAV---------------GTLKSIDPDRIILKKITLTGYPQRVSKLKASVRYMFHNPEDVKWFKPVEVWTKCGRRGRIKEPLGTHGALKCIFNGVLQQHDTVCMSLYKRSYPK 784
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|950968763|ref|XP_014499647.1| (PREDICTED: pre-rRNA-processing protein TSR1 homolog [Vigna radiata var. radiata]) HSP 1 Score: 337.806 bits (865), Expect = 2.138e-104 Identity = 191/471 (40.55%), Postives = 258/471 (54.78%), Query Frame = 0
Query: 2 SEYQASWF----EGEEEEGQNDEGGEEEEGEEEEGEEEEGEEEGEEEEDPSLSIGSEQQRQGRQVRQLEKDEL--------------------EFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPK 448
SEYQA+W + + + +ND+G +EGE+ +E + + +D SL +G ++ +E D L EFPDEV TP D PA++RFA+YR LKS RTS WDP ESLP++YA+IF+F +F K +H+LA +E++ E SE +P GSY L++ VP+ V + L +K P+T LL++E+KVSVLHF++ +H P+KSK+ LVF+ GFR F RPVFS +N DK+K RFLH GRF+VA+++ P+S PP P ++ + S G+ A P A V G+L TVDPDRIILKR++LTGYP RV +R A V+HMFYNPEDVKWFKP EL TK G G I+EPVGTHG MK N +++Q DTVC+ LFKR +PK
Sbjct: 386 SEYQAAWIVDDSDESDFDDENDDGMVLDEGEDGLRGKETNKYSEFDGDDVSLRLGDSEEETDNDSVMMEVDNLTREKIQDELKELKEAHAADEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPQDYAKIFEFDNF---------------KRTQKHVLA-------------------KALELDQE-----ISEHCIPVGSYARLQIKEVPSAVASKLC-LLSKRMPVTTCGLLKHESKVSVLHFSVKKHETYDAPIKSKEELVFHVGFRQFVGRPVFSSEFINTDKNKMERFLHAGRFSVASIYAPISFPPLPSIILKIS--------GENAA------------PVVAAV---------------GSLKTVDPDRIILKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFKPVELYTKRGLRGRIKEPVGTHGTMKCLLNGVLEQRDTVCMNLFKRAYPK 781
BLAST of EWM27209.1 vs. NCBI_GenBank
Match: gi|657966111|ref|XP_008374737.1| (PREDICTED: pre-rRNA-processing protein TSR1 homolog [Malus domestica]) HSP 1 Score: 336.65 bits (862), Expect = 5.053e-104 Identity = 187/470 (39.79%), Postives = 261/470 (55.53%), Query Frame = 0
Query: 2 SEYQASWF---EGEEEEGQNDEG-------------GEEEEGEEEEGEEEEG--EEEGEEEEDPSL----SIGSEQ-QRQGRQVRQLEKDELEFPDEVQTPDDRPAKERFARYRALKSLRTSPWDPNESLPREYARIFKFSSFAASLARVTSEMEEREKAQNRHLLATLLPPPASSATKKKDGEDDSGMEVEDEKSSDKFSEGFVPAGSYVTLELGGVPAEVGKRAQRLQAKESPLTVFSLLRYENKVSVLHFNILRHPACSTPVKSKDRLVFYTGFRSFEARPVFSEHNLNCDKHKFSRFLHGGRFAVATVFGPVSMPPCPVLVFRKSSPDEMGEEGKTATTPSRTGGSGSFLPATAGVVEPKSHTRDLTLVATGTLHTVDPDRIILKRILLTGYPIRVKRRSAVVKHMFYNPEDVKWFKPAELSTKLGAAGHIREPVGTHGLMKVRFNRIIQQSDTVCLPLFKRVFPK 448
SEYQA+W EEE +DE G+++ +E +++ + +GE + D + ++ EQ + + R+++Q D+ EFPDEV TP D PA++RFA+YR LKS RTS WDP ESLP EYARIF F +F + +++LA L GM+ E+ S+ AGSY L + VPA V + + AK P+ LL++E+K+SVLHF+I +H S P+KSKD L+F+ GFR F ARP++S N+N +KHK RFLH GRF++A+++ P+S PP P++ + S GV P T+ A G L +DPDRIILK+I LTGYP RV + A V++MF+NPEDVKWFKP E+ TK G G I+EP+GTHG +K FN ++QQSDTVC+ L+KR +PK
Sbjct: 385 SEYQAAWIVDDTDEEESSTDDEADGMILDERDGGYPGQDDNNYSDESDDQASIRDSDGETDVDSVMMEGENLTKEQLENEIRKIKQAHADDEEFPDEVDTPLDIPARKRFAKYRGLKSFRTSSWDPKESLPAEYARIFAFDNFNRT---------------QKNVLAKAL-----------------GMDQEN-------SDDCATAGSYARLYITEVPASVASKLC-MHAKTIPVVACGLLQHESKMSVLHFSIKKHDTFSAPIKSKDELIFHVGFRQFIARPIYSTDNMNSNKHKMERFLHPGRFSMASIYAPISFPPLPLIALKSSE----------------------------GVAAPP------TVAAVGALKCIDPDRIILKKITLTGYPQRVSKLKASVRYMFHNPEDVKWFKPVEVWTKCGRRGRIKEPLGTHGALKCIFNGVLQQSDTVCMSLYKRAYPK 780 The following BLAST results are available for this feature:
BLAST of EWM27209.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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