EWM30304.1, cds344 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|585112963|gb|EWM30304.1| (histidine biosynthesis trifunctional protein [Nannochloropsis gaditana]) HSP 1 Score: 719.539 bits (1856), Expect = 0.000e+0 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
Query: 1 MLIFKLPLEDVLSHPDLAKRYCLLGSVQLQTSESKALPSIVPEGLLQRHNIVLGPITLGQVDEVRPWLHNGARKAFFAVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAEGIKALNKESIRVLLHGAPSEIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRGKPPVSAQKAANGYRKGLNLTIAAALKYGLFPHV 355
MLIFKLPLEDVLSHPDLAKRYCLLGSVQLQTSESKALPSIVPEGLLQRHNIVLGPITLGQVDEVRPWLHNGARKAFFAVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAEGIKALNKESIRVLLHGAPSEIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRGKPPVSAQKAANGYRKGLNLTIAAALKYGLFPHV
Sbjct: 1 MLIFKLPLEDVLSHPDLAKRYCLLGSVQLQTSESKALPSIVPEGLLQRHNIVLGPITLGQVDEVRPWLHNGARKAFFAVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAEGIKALNKESIRVLLHGAPSEIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRGKPPVSAQKAANGYRKGLNLTIAAALKYGLFPHV 355
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|673042695|ref|XP_008875308.1| (phosphoribosyl-ATP diphosphatase [Aphanomyces invadans] >gi|574468981|gb|ETV95997.1| phosphoribosyl-ATP diphosphatase [Aphanomyces invadans]) HSP 1 Score: 153.68 bits (387), Expect = 1.811e-39 Identity = 107/305 (35.08%), Postives = 154/305 (50.49%), Query Frame = 0
Query: 21 YCLLGSVQLQTSES--KALPSIVPEGLLQRHNIVLGPITLGQVDEVRPWLHNGARKAFFAVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAEGIKALNKESIRVLLHGAPSEII---NCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQ 320
+ ++GS+ ++ E + P+ +L+ H++V+GP T +DE WL GA + +VE + + L P RV +S+ ++D LE +A VA + I G+ +S +VE + L ES RV++ AP +++ + H V + P A++D F CLR+DRPDGLF TVV D VALGLVYSS ES+ +VAE RG+++SRSRGGLWRKGDSSG QEL+ LD+DCDSDA+R +VRQ
Sbjct: 17 WGIVGSIYIRQDERSLRLAPTNEMAAVLKSHHVVIGPFTTSMLDEAVKWLDQGAVHVVLQTTYQELVEGIALDL---PPSRVYLSMT-------DSD-------LEQVAAPTAVA--------------------MLPKISSGVILTATSSSPSISLVE-----------FRKLLPESYRVVVANAPLDLLPTYHHHHVDVVGSP------ASLDAGATFAQCLRSDRPDGLFATVVTDLSGVALGLVYSSVESIIAAVAERRGIFYSRSRGGLWRKGDSSGHTQELIRLDLDCDSDAIRCIVRQ 267
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|953501089|emb|CEG37735.1| (phosphoribosyl-atp diphosphatase [Plasmopara halstedii]) HSP 1 Score: 152.14 bits (383), Expect = 2.423e-38 Identity = 112/326 (34.36%), Postives = 170/326 (52.15%), Query Frame = 0
Query: 17 LAKRYCLLGSV--QLQTSESKALPSIVPEGLLQRHNI-----------VLGPITLGQVDEVRPWLHNGARKAFF--AVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFL-EHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAEGIKALNKESIRVLLHGAPSEIINCHLVAGLK-EPV---LPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRG 322
L +R+ +LG V +L +S+ + L +P + H + +LGP ++ ++ + WL G A A + ++ + I ++ LP R+ + + V D + L + +A+L ++ S V + + S+ E+ + + C + L L VE + + + ALN+ IR H ++ G + EPV + +A VD AF+ CLRTDRPDGLFTTVV DE VALGLVYSS ES+ ++A RGVY+SRSRGGLW+KG+SSG Q+L+ +D+DCDSDALRF V Q G
Sbjct: 20 LLRRFSMLGLVLAELSSSQLRELALALPAEKTKPHELELKASLLDSRTLLGPFSVEMIEPLISWLDQGTEMALVEAASSEDAELKRIAIAVSDLPANRLVLRI------PVSLDQITNTTELQDKLAELNDIFSGVILVISSVSLVQEKGCEEVFANLEALRNCVNESFL---LAVEMSSGSASNHSTMVALNR--IRDF-HQKHIHVVTSAFCRGEEDEPVDTVIDEGEALVDAGQAFVHCLRTDRPDGLFTTVVADEAGVALGLVYSSKESILAAIASGRGVYYSRSRGGLWKKGESSGNAQQLIKIDMDCDSDALRFTVNQTG 333
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|570325611|gb|ETO73559.1| (phosphoribosyl-ATP diphosphatase [Phytophthora parasitica P1976]) HSP 1 Score: 151.754 bits (382), Expect = 3.907e-38 Identity = 102/277 (36.82%), Postives = 146/277 (52.71%), Query Frame = 0
Query: 52 VLGPITLGQVDEVRPWLHNGARKAFF--AVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASM---QWSAEGIKALNKESIRVLLHGAPS-EIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRG 322
+LGP + ++ + WL G +K A + +E + I ++ LP RV + + + A + + E +A+L + AS V + ++ E L+ ++ K L + PA+ + + I+ L+ I V+ G S + +V G E V VD F+ CLRTDRPDGLFTTVV DE VALGLVYSSAES+ +V+ RGVY+SRSRGGLW+KG+SSG Q+L+ +D DCDSDALRF V Q G
Sbjct: 68 LLGPFSAEMLEPLASWLDQGIKKVLVDAASSEDAELERVAIAVSELPANRVVLRIPVPSLQAQDVSELG-----EKLARLVDTASGVVFVIDSVTLTQESGFEALSTSLQALRKSVDEGYLFAVEMSTGPAAAFNSEVALTRIQELHHRHIHVVSPGYCSGDGEQADMVTGDGEAV-------VDAALCFVKCLRTDRPDGLFTTVVADEAGVALGLVYSSAESIVAAVSSGRGVYYSRSRGGLWKKGESSGNAQKLIKIDTDCDSDALRFTVNQTG 332
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|970656938|gb|KUF94888.1| (hypothetical protein AM588_10004962 [Phytophthora nicotianae]) HSP 1 Score: 149.828 bits (377), Expect = 4.659e-38 Identity = 102/278 (36.69%), Postives = 148/278 (53.24%), Query Frame = 0
Query: 52 VLGPITLGQVDEVRPWLHNGARKAFF--AVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAE----GIKALNKESIRVLLHGAPS-EIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRG 322
+LGP + ++ + WL G K + + +E + I ++ LP RV + + + A + + E +A+L + AS V + ++ E L+ ++ K L + PA+ +++E I+ L+ I V+ G S + +V G E A VD F+ CLRTDRPDGLFTTVV DE VALGLVYSSAES+ +V+ RGVY+SRSRGGLW+KG+SSG Q+L+ +D+DCDSDALRF V Q G
Sbjct: 68 LLGPFSAEMLEPLASWLDQGIEKVLVDASSSEDAELERVAIAVSELPANRVVLRIPVPSLQAQDVSELG-----EKLARLVDTASGVVFVIDSVTLTQESGFEALSTSLQALRKSVDEGYLFAVEMSTGPAAA-FNSEVVLTRIQELHHRHIHVVSPGYCSGDGEQADMVTGDGE-------AVVDAALCFVKCLRTDRPDGLFTTVVADEAGVALGLVYSSAESIVAAVSSGRGVYYSRSRGGLWKKGESSGNAQKLIKIDMDCDSDALRFTVNQTG 332
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|698795418|ref|XP_009830738.1| (phosphoribosyl-ATP diphosphatase [Aphanomyces astaci] >gi|574114314|gb|ETV79802.1| phosphoribosyl-ATP diphosphatase [Aphanomyces astaci]) HSP 1 Score: 149.443 bits (376), Expect = 6.430e-38 Identity = 108/303 (35.64%), Postives = 154/303 (50.83%), Query Frame = 0
Query: 21 YCLLGSVQLQTSES--KALPSIVPEGLLQRHNIVLGPITLGQVDEVRPWLHNGARKAFFAVPRETVVEHLKIQLAG-LPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAEGIKALNKESIRVLLHGAPSEIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQ 320
+ ++G++ ++ ES + +PS LL+ +V+GP T +DE WL +GA + +T + L +A LP RV +SV L + + A A +L L++ + + ++SL Q + L ES RVLL +P +++ + + P +A+D AF CLR+DRPDGLF TVV D VALGLVYSS ESV +VAE RG+++SRSRGGLWRKGDSSG +QELV LD+DCDSDA+R +V Q
Sbjct: 17 WGIVGTIYVRQEESALRQVPSKEQIALLRSQRVVIGPFTTSMLDEAVTWLDHGA----VHIVLQTTFQELVAGIASDLPPSRVYLSVSLTDNEQLVASTAA-------------------------------ALGTLSSGVFLSGEAISSSSLVQ----------------FRKLLPESYRVLLTDSPLDLLATYHHQHIDLVGSP---SALDAGQAFAQCLRSDRPDGLFATVVADLSGVALGLVYSSIESVVAAVAERRGIFYSRSRGGLWRKGDSSGHVQELVRLDMDCDSDAIRCLVLQ 265
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|1214713819|gb|OWZ24699.1| (Phosphoribosyl-ATP diphosphatase [Phytophthora megakarya]) HSP 1 Score: 150.599 bits (379), Expect = 7.393e-38 Identity = 107/276 (38.77%), Postives = 148/276 (53.62%), Query Frame = 0
Query: 52 VLGPITLGQVDEVRPWLHNGARKAFF-AVPRETV-VEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPA-SMQWSAEGIKALNKESIRVLLHGAPSEIINCHLVAGLKEPVLPL--KQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRG 322
+LGP + ++ + WL G K AV E +E + I ++ LP RV + + + EA Q + +A+L +VA V + + + E+ L ++ K L VE A + + I+ L+ +I V+ G AG E V + +A VD AF+ CLRTDRPDGLFTTVV DE VALGLVYSSAES+ +V+ RGVY+SRSRGGLW+KG+SSG Q+L+ +D+DCDSDALRF V Q G
Sbjct: 68 LLGPFSADMLEPLAAWLDQGIEKVLVDAVSSEDAELERVAIAVSELPANRVALRIPVPSLHTNEA-----VQLQQKLARLTDVACGV-VFVIDSPLTQEDGFEALFTSLQVLRKSVDDNFL---FAVEMSAGNADLAVTRIQELHHRNIYVVAPG---------YCAGEGEDVAAVVEGEAVVDAALAFVKCLRTDRPDGLFTTVVADEAGVALGLVYSSAESIIAAVSSGRGVYYSRSRGGLWKKGESSGNAQKLIKIDMDCDSDALRFTVNQTG 325
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|567959344|gb|ETK84917.1| (phosphoribosyl-ATP diphosphatase [Phytophthora parasitica] >gi|567988050|gb|ETL38334.1| phosphoribosyl-ATP diphosphatase [Phytophthora parasitica]) HSP 1 Score: 150.599 bits (379), Expect = 9.342e-38 Identity = 102/277 (36.82%), Postives = 146/277 (52.71%), Query Frame = 0
Query: 52 VLGPITLGQVDEVRPWLHNGARKAFF--AVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASM---QWSAEGIKALNKESIRVLLHGAPS-EIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRG 322
+LGP + ++ + WL G K A + +E + I ++ LP RV + + + A + + E +A+L + AS V + ++ E L+ ++ K L + PA+ + + I+ L+ I V+ G S + +V G E V VD F+ CLRTDRPDGLFTTVV DE VALGLVYSSAES+ +V+ RGVY+SRSRGGLW+KG+SSG Q+L+ +D+DCDSDALRF V Q G
Sbjct: 68 LLGPFSAEMLEPLASWLDQGIEKVLVDAASSEDAELERVAIAVSELPANRVVLRIPVPSLQAQDVSELG-----EKLARLVDTASGVVFVIDSVTLTQESGFEALSTSLQALRKSVDEGYLFAVEMSTGPAAAFNSEVALTRIQELHHRHIHVVSPGYCSGDGEQADMVTGDGEAV-------VDAALCFVKCLRTDRPDGLFTTVVADEAGVALGLVYSSAESIVAAVSSGRGVYYSRSRGGLWKKGESSGNAQKLIKIDMDCDSDALRFTVNQTG 332
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|813196493|ref|XP_012208557.1| (hypothetical protein SPRG_13327 [Saprolegnia parasitica CBS 223.65] >gi|641526374|gb|KDO20745.1| hypothetical protein SPRG_13327 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 149.058 bits (375), Expect = 9.536e-38 Identity = 113/315 (35.87%), Postives = 157/315 (49.84%), Query Frame = 0
Query: 6 LPLEDVLSHPDLAKRYCLLGSVQLQTSESKALPSIVPEGLLQRHNIVLGPITLGQVDEVRPWLHNGARKAFFAVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAEGIKALNKESIRVLLHGAPSEIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQ 320
LP+ L+ L + + LLG V ++ S + + LL + +GP +D WL +GA KA F +V I L LP +RV +S+ + D V A+A + + AS + + D S E+++ L A+ G + ++AP + A + L+ + R+ L PS A D AF+ CL++DRPDGLFTTVV D VALGLVYSSAES+ SV + RG+Y+SRSR GLW KGDSSG +QEL+ LD+DCDSDALRF V Q
Sbjct: 3 LPIATTLNEAPL-RAWSLLGPVYVRLSAQELSTAAFSHALLATTRLYVGPFAPDAIDSAVTWLDHGAHKAVFHTTYTALVTG-GIAL-DLPADRVLLSLAVTSADVV---ALA-----TTLPAVTAFASGLLLQLPADV--SPEAVLPLRKALPEGFV----------VAIDAPGTA--IATNVGPLHAQ--RLSLAAVPS--------------------ANDDVTDAFVRCLKSDRPDGLFTTVVTDASGVALGLVYSSAESIVASVQQRRGIYYSRSRNGLWPKGDSSGHVQELIQLDMDCDSDALRFTVFQ 270
BLAST of EWM30304.1 vs. NCBI_GenBank
Match: gi|570949485|gb|ETP14742.1| (phosphoribosyl-ATP diphosphatase [Phytophthora parasitica CJ01A1] >gi|570982857|gb|ETP42812.1| phosphoribosyl-ATP diphosphatase [Phytophthora parasitica P10297]) HSP 1 Score: 150.214 bits (378), Expect = 1.437e-37 Identity = 103/278 (37.05%), Postives = 148/278 (53.24%), Query Frame = 0
Query: 52 VLGPITLGQVDEVRPWLHNGARKAFF--AVPRETVVEHLKIQLAGLPRERVGVSVVLEGKDAVEADAMAGGQFLEHIAKLYEVASSVQINFGNDSIKSEESLICLANAIHHGIKCQGATSLSQELVVEAPASMQWSAE----GIKALNKESIRVLLHGAPS-EIINCHLVAGLKEPVLPLKQAAVDGVGAFLACLRTDRPDGLFTTVVVDECNVALGLVYSSAESVRTSVAELRGVYFSRSRGGLWRKGDSSGALQELVGLDVDCDSDALRFVVRQRG 322
+LGP + ++ + WL G K A + +E + I ++ LP RV + + + A + + E +A+L + AS V + ++ E L+ ++ K L + PA+ +++E I+ L+ I V+ G S + +V G E V VD F+ CLRTDRPDGLFTTVV DE VALGLVYSSAES+ +V+ RGVY+SRSRGGLW+KG+SSG Q+L+ +D+DCDSDALRF V Q G
Sbjct: 68 LLGPFSAEMLEPLASWLDQGIEKVLVDAASSEDAELERVAIAVSELPANRVVLRIPVPSLQAQDVSELG-----EKLARLVDTASGVVFVIDSVTLTQESGFEALSTSLQALRKSVDEGYLFAVEMSTGPAA-AFNSEVVLTRIQELHHRHIHVVSPGYCSGDGEQADMVTGDGEAV-------VDAALCFVKCLRTDRPDGLFTTVVADEAGVALGLVYSSAESIVAAVSSGRGVYYSRSRGGLWKKGESSGNAQKLIKIDMDCDSDALRFTVNQTG 332 The following BLAST results are available for this feature:
BLAST of EWM30304.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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