EWM27271.1, cds3439 (CDS) Nannochloropsis gaditana

Overview
NameEWM27271.1
Unique Namecds3439
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:439570..440727 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27271.1
ProductTetratricopeptide-like helical
Orig transcript idgnl|cribi|Naga_100038g47.7726.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:439570..440727 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Homology
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|585109452|gb|EWM27271.1| (Tetratricopeptide-like helical [Nannochloropsis gaditana])

HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query:    1 MAASSAASAVAATSARPYISSRFTEVAKALLAEDWARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPMERVPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMYFVSKLATLARTCPMPVRPPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR 385
            MAASSAASAVAATSARPYISSRFTEVAKALLAEDWARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPMERVPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMYFVSKLATLARTCPMPVRPPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR
Sbjct:    1 MAASSAASAVAATSARPYISSRFTEVAKALLAEDWARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPMERVPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMYFVSKLATLARTCPMPVRPPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR 385          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|219118345|ref|XP_002179949.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409002|gb|EEC48935.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 314.694 bits (805), Expect = 2.668e-101
Identity = 171/403 (42.43%), Postives = 240/403 (59.55%), Query Frame = 0
Query:    1 MAASSAASAVAATSARPYISS-RFTEVAKALLAEDWARVDTRV-PHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPMERVPAEGLVVPHIH-TGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFT-LWPGISKPGLWMYFVSKLATLARTCPMPVR--------------PPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR 385
            MA+S +    AA  +  +  + R   + + +LA+D+  +D  V    ++ L  RGAH+CWHKH TF +HLL V  IL LW Q +T+ R GL+HSAYSNSYVNLA+F   ++R +++   G++AE L++ FC++DRQ+++V+TL     +P +GL VPH+  +  SV L+S+ L  L+V TMAD+ADQ +GWQD LFG           E        D    H  T LWPG+SKPGLWM ++S+LA +ART     +              PPVF  G   L  + E  ARD YW V+S +  D     ++I  L   + +NP+  EP  +LAQ HL  G+F  AL    +++DL  +WGT WDKR+SF AW+AWTRVL Q A D+  W +N+W + NLGLVR
Sbjct:    1 MASSGSGPVCAADGSLDFGGAERERNLVEQILADDYEGLDPIVLRQSISALRSRGAHRCWHKHSTFLEHLLSVHNILRLWGQGRTIGRVGLFHSAYSNSYVNLALFDPAIERGMMKTLIGEDAEVLVHLFCIIDRQQVVVNTLLAQGFIPKQGLTVPHLRDSSKSVFLNSETLRMLVVFTMADIADQYFGWQDTLFGG-------GGQEGSMIIPGKDDVARHDTTALWPGVSKPGLWMSYLSQLAEVARTFVPSTQDVNRSADEDRTADFPPVFANGTQSLSVSDEVAARDFYWSVVSGEVTDNA---EAIEVLQLCVKMNPWAFEPLVILAQKHLHTGNFDSALNTTYRALDLQHQWGTAWDKRLSFGAWVAWTRVLMQRARDRQSWPTNSWDINNLGLVR 393          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|1210521241|dbj|GAX19989.1| (hypothetical protein FisN_1Lh537 [Fistulifera solaris])

HSP 1 Score: 306.99 bits (785), Expect = 7.193e-98
Identity = 173/388 (44.59%), Postives = 230/388 (59.28%), Query Frame = 0
Query:   14 SARPYISSRFTEVAKALLAEDWARVDTRV-PHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPMERVPAEGLVVPHIHTGD-SVHLSSKVLGQLLVMTMADVADQQYGWQDDLFG-----DAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMYFVSKLATL----------ARTCPMPVRPPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLV 384
            SA    +S      + +LAED+ ++D  V    +  L +RGAH+CWHKH TF +HL+GV  +L LW Q Q +AR GL+HSAYSNSYVNLA+F    +RD++ +  G EAEEL++ FC++DRQK++V+T+     +P EGL VPH+   D  V LS++ L  L+V TMAD+ADQ +GWQD LFG      +   P Q   + H+              LWPG+SKPGLWM +VS LA +          AR   +P  PPVF  G   L    E +ARDLYW V+S           +I +L +    NP+  EP  LLAQ  L   D  RA  AA +++ L  +WGT WDKR+SF AW+AWTRVL Q A ++ PW +N+W V NLGLV
Sbjct:   47 SAETITNSSRNATFELILAEDYDQLDGPVLATSIGALKQRGAHRCWHKHSTFLEHLVGVHNVLRLWGQGQKIARVGLFHSAYSNSYVNLALFDPWTERDVMTRLIGPEAEELVHLFCIIDRQKVVVNTVLKQGFIPLEGLSVPHLREADKEVFLSAETLRLLVVFTMADIADQYFGWQDQLFGGGGEAGSMIIPGQDREDRHDTA-----------ALWPGVSKPGLWMSYVSDLAQVVKRFHDEMGSARDEALPAIPPVFANGTSTLLLQDEEKARDLYWSVVSSSGEPDNDPKNTIQQLQECHERNPWAFEPLVLLAQKLLHQNDHERAQAAATQALQLQQDWGTAWDKRLSFGAWVAWTRVLLQRASERDPWPTNSWEVNNLGLV 423          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|1210527010|dbj|GAX14337.1| (hypothetical protein FisN_1Hh537 [Fistulifera solaris])

HSP 1 Score: 305.449 bits (781), Expect = 1.171e-96
Identity = 172/369 (46.61%), Postives = 223/369 (60.43%), Query Frame = 0
Query:   30 LLAEDWARVDTRVPHLLAR-LTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPMERVPAEGLVVPHIHTGD-SVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEE-TKKSDSEVMH-PFTLWPGISKPGLWMYFVSKLATL----------ARTCPMPVRPPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLV 384
            +LAED+  +D  V     R L +RGAH+CWHKH TF +HL+GV  IL LW Q + +AR GL+HSAYSNSYVNLA+F    +RD++ +  G EAEEL++ FC++DRQ ++V+T+     +P EGL VPH+   D  V+LS++ L  L+V TMAD+ADQ +GWQD LFG           ED        D E  H    LWPG+SKPGLWM +VS LA +          AR   +P  PPVF  G   L    E +ARDLYW V+S            I +L +    NP+  EP  LLAQ  L   D+ RA  AA +++ L  +WGT WDKR+SF AW+AWTRVL Q A ++ PW +N+W V NLGLV
Sbjct:  114 ILAEDYDELDGPVLTTSIRALKQRGAHRCWHKHSTFLEHLVGVHDILRLWGQGKKIARVGLFHSAYSNSYVNLALFDPSTERDVMTRLIGSEAEELVHLFCIIDRQNVVVNTVLKQGFIPLEGLSVPHLREADKEVYLSAETLRLLVVFTMADIADQYFGWQDQLFG--------GGGEDGSMIIPGQDREGRHDTAALWPGVSKPGLWMSYVSDLAQVVKRYHDDMVSARDEVLPAIPPVFANGTSKLSLQDEEKARDLYWSVVSSSGEPDNDPKNIILQLQECHERNPWAFEPLVLLAQKLLHQNDYERAQAAASQALQLQQDWGTAWDKRLSFGAWVAWTRVLLQRASERDPWPTNSWEVNNLGLV 474          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|470408010|ref|XP_004336092.1| (tetratricopeptide repeat domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440792871|gb|ELR14079.1| tetratricopeptide repeat domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 290.812 bits (743), Expect = 3.280e-92
Identity = 164/379 (43.27%), Postives = 225/379 (59.37%), Query Frame = 0
Query:   25 EVAKALLAEDWARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPM---ERVPAEGLVVPHIHTGD-SVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMYFVSKLATLARTC--------PMPVRPPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDK-------RVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLV 384
            E A+ALL E+    D ++P LL +L + GA +CWHKHGTFKQHL GVW+IL LW+Q Q + RCGLYHSAYSNSYVNLAIFK    R+ V+   G EAEELI+ FC + RQ++I D + P+   + +P EG+ V HI   D  + +S K++   L++T+AD  DQ YGWQD LF +         N               P TLWP   KPGLWM  +S++A L+R          P+   PP+FN    +L+  +ER+ARDLYW V+      +   + +   L +A+ALNPF+AEP  LLAQ + V+G +  A   A++++ L+ EWGT WDK         ++  W+AW R+    A  K  W S ++G+INLGLV
Sbjct:   19 EHARALLREELHHCDPKLPALLEQLGKHGASECWHKHGTFKQHLFGVWRILYLWKQSQAVCRCGLYHSAYSNSYVNLAIFKPDTGRETVRSAVGNEAEELIHFFCTIPRQELIFDHILPLHPDKPIPKEGVEVRHIRNKDEKIRVSPKLMKISLLLTIADFCDQWYGWQDLLFANEGGLTMSGDN---------------PATLWPSTGKPGLWMSRLSQMAVLSRRIHEQEPDDEPL---PPIFNNCSTVLEPDSEREARDLYWRVVMHKTEQEQHEEAAED-LRKAIALNPFVAEPRVLLAQIYNVSGRYEEAESQAQEALRLLFEWGTAWDKVPPWLSLLPAWFGWIAWARINVLKARRKE-WPSTSFGIINLGLV 377          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|302810161|ref|XP_002986772.1| (hypothetical protein SELMODRAFT_124836 [Selaginella moellendorffii] >gi|300145426|gb|EFJ12102.1| hypothetical protein SELMODRAFT_124836 [Selaginella moellendorffii])

HSP 1 Score: 258.07 bits (658), Expect = 1.905e-79
Identity = 156/397 (39.29%), Postives = 220/397 (55.42%), Query Frame = 0
Query:   25 EVAKALLAEDWARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLF------------PMER--------VPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMYFVSKLATLAR-----------TCPMPVR-----PPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR 385
            E A+  L E++A +D  +PH L+ L   GA +C+HKHGTF QHL+ V++IL LW  P  + RCGL+HS+YSNSYVNLAIF+ GVDR  V+   G  AE+L+  FC+V RQ++I D L               +R        +P   + V +I  G+ V L  +++   +++TMAD  DQ Y WQD+LF           N D E     +    H + LWPG  +PGLWM  +S++  L +            C  P       PP+F+    LL    +  ARDLY E +  D + +G  D    +L  A   NP++ EPH +LAQ   + G F  A + A   ++ +L+WGT WDKRV++EAW+AW RVL  +A++K  W S AWG+INLGLV+
Sbjct:    2 EKARLFLREEYAAIDPALPHWLSVLRSTGASECFHKHGTFFQHLVEVYRILKLWGAPDDVCRCGLFHSSYSNSYVNLAIFEPGVDRSRVKDLIGDPAEQLVELFCIVPRQELIHDMLLFRFSDDQLQEAAASDRSCKKSKLLLPDGFITVKNIRNGEDVRLPRRIVAVFVLLTMADFCDQLYNWQDNLF----------DNRDGELRFSGN----HYWALWPGDVQPGLWMSSISRMGLLLKGLLNEEEQDNGICDAPAAIALKLPPLFDGCSKLLRPVDQIAARDLYLEAVGADLKRQG-FDWIAGKLRGACERNPWIGEPHLVLAQLCCLEGAFEEAAVEAALGLERLLQWGTAWDKRVAWEAWIAWGRVLEMNAKEKK-WPSTAWGMINLGLVK 382          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|302772192|ref|XP_002969514.1| (hypothetical protein SELMODRAFT_91578 [Selaginella moellendorffii] >gi|300162990|gb|EFJ29602.1| hypothetical protein SELMODRAFT_91578 [Selaginella moellendorffii])

HSP 1 Score: 258.07 bits (658), Expect = 1.926e-79
Identity = 156/397 (39.29%), Postives = 220/397 (55.42%), Query Frame = 0
Query:   25 EVAKALLAEDWARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLF------------PMER--------VPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMYFVSKLATLAR-----------TCPMPVR-----PPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR 385
            E A+  L E++A +D  +PH L+ L   GA +C+HKHGTF QHL+ V++IL LW  P  + RCGL+HS+YSNSYVNLAIF+ GVDR  V+   G  AE+L+  FC+V RQ++I D L               +R        +P   + V +I  G+ V L  +++   +++TMAD  DQ Y WQD+LF           N D E     +    H + LWPG  +PGLWM  +S++  L +            C  P       PP+F+    LL    +  ARDLY E +  D + +G  D    +L  A   NP++ EPH +LAQ   + G F  A + A   ++ +L+WGT WDKRV++EAW+AW RVL  +A++K  W S AWG+INLGLV+
Sbjct:    2 EKARLFLREEYAAIDPALPHWLSVLRSTGASECFHKHGTFFQHLVEVYRILKLWGAPDDVCRCGLFHSSYSNSYVNLAIFEPGVDRSRVKDLIGDPAEQLVELFCIVPRQELIHDMLLFRFSDDQLQEAAASDRSGKKSKLLLPDGFITVKNIRNGEDVRLPRRIVAVFVLLTMADFCDQLYNWQDNLF----------DNRDGELRFSGN----HYWALWPGDVQPGLWMSSISRMGLLLKGLLNEEEQDNGICDAPAAIALKLPPLFDGCSKLLRPVDQIAARDLYLEAVGADLKRQG-FDWIAGKLRGACERNPWIGEPHLVLAQLCCLEGAFEEAAVEAALGLERLLQWGTAWDKRVAWEAWIAWGRVLEMNAKEKK-WPSTAWGMINLGLVK 382          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|1207996544|ref|NP_001339486.1| (uncharacterized protein LOC100193035 [Zea mays] >gi|224031197|gb|ACN34674.1| unknown [Zea mays] >gi|1142712474|gb|AQK76398.1| hypothetical protein ZEAMMB73_Zm00001d018529 [Zea mays])

HSP 1 Score: 254.988 bits (650), Expect = 1.267e-77
Identity = 158/408 (38.73%), Postives = 215/408 (52.70%), Query Frame = 0
Query:   36 ARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLF-------------------------------PMER-----VPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMYFVSKLATL--------------------ARTCPMP-VRPPVFNEGQFLLDRTAERQARDLYWE-VMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR 385
            A VD  +P L A L   GA +CWHKHGTF  HLL V +IL LW  P  +ARCGLYHSAYSNSYVNLAIF+    R  V    G  AE L++ FCVV RQ+++ D L                                P  R     +PA+G+ V HI TG+ V LS ++    L+MT+AD +DQ + WQD LF ++  R   + N                 +LWPG  KPGLW+   S++A L                     R   M  V PPVFN    LL+   ++ ARDLYWE V  E+  D  K+++    L Q++A NPF+ EPH +LAQ +L    +  A + AE+ + L+LEWG++WDKR+ +E W++W R +   A DK  W   ++G+++LGLV+
Sbjct:   37 AEVDPALPGLAAVLRGAGAGECWHKHGTFLAHLLDVHRILRLWGAPDAVARCGLYHSAYSNSYVNLAIFQPDTGRAHVAAVVGGPAERLVHLFCVVPRQQLVHDDLLFHYSDQDLADDLASSEESVRDARRGVFDDAQPWRRKIQRLLPADGITVKHIRTGEDVSLSRRIAATFLLMTIADFSDQLFDWQDRLFDNSNGRLEFSGNT--------------WTSLWPGTGKPGLWVTSSSRMAALYTLIVREEEIHITQRARDTHGRDEDMDLVIPPVFNGCTRLLNAEDQKVARDLYWEAVCGEEASDWLKVEQ---LLQQSIAKNPFVGEPHLVLAQVYLNMERYGEAQMQAEEGLRLLLEWGSSWDKRMPWEGWVSWGRAMLTKATDKD-WPHTSFGILSLGLVK 426          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|1179560156|ref|XP_020699999.1| (uncharacterized protein LOC110112200 [Dendrobium catenatum])

HSP 1 Score: 240.736 bits (613), Expect = 3.637e-72
Identity = 151/411 (36.74%), Postives = 220/411 (53.53%), Query Frame = 0
Query:   38 VDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFK-AGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLF--------------------------------PMER-----VPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFT-LWPGISKPGLWMYFVSKLATL-------------ARTCPMPVR-----------PPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR 385
            VD  +PH+++ +T  GA +CWHK   F  HLL V++IL LW  P  +ARCGL+HS YSNSYV+LAIF  A   R+L++   G EAE L++ FCVV RQ +I D L                                 P  R     +P  G+ V HI+TG+ V LS +++   L+MTMAD  DQ Y +QD+LF           N D +     ++     FT LWPG  +PGLWM  +S++A L             +R   +P++           PPVF+    +L R ++  ARDLYW+ M+  P +K  +  + S L +    N ++AEPH +L Q ++    +  A   AE+ + L+LEWG+ WDKR+S+E W+AW R+L Q A+ ++ W   ++G+I+LGLVR
Sbjct:   26 VDPNLPHMVSAITSVGAGECWHKDNCFLGHLLDVYRILKLWGAPDPVARCGLFHSVYSNSYVDLAIFDPANGGRELLRSIAGDEAERLVHLFCVVPRQSLIHDDLLFQYTELELVEHLTESEESVRRARDEGVVDEREPWRRKMVAVLPEGGVTVKHINTGEDVALSRRMVATFLLMTMADFCDQLYAFQDELF----------DNTDGQMNFSGNT-----FTALWPGDGRPGLWMNSLSRMAALYNLILREESLYLQSRKASIPIQSERDEALELIVPPVFSNCTKILGRESQLLARDLYWKAMA-GPANK-DMAAAESLLKECCKENGYVAEPHLVLGQVYMAVERYEEAEREAEEGLRLLLEWGSPWDKRMSWEGWVAWGRLLLQKAKARS-WPKTSFGIISLGLVR 418          
BLAST of EWM27271.1 vs. NCBI_GenBank
Match: gi|1011741129|gb|KYO56824.1| (hypothetical protein AUP44_21695 [Tistrella mobilis])

HSP 1 Score: 219.935 bits (559), Expect = 7.860e-65
Identity = 131/357 (36.69%), Postives = 194/357 (54.34%), Query Frame = 0
Query:   33 EDWARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPMERVPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRPCQASNEDHEETKKSDSEVMHPFTLWPGISKPGLWMY-FVSKLATLARTCP----MPVRPPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLV 384
            +DW +VD  +P LL  L  R A + WHK GTFK HLL V++ L+LW+QP+ +   GL+HS YSN +V L +F A   R  +    G+EAE LI+ FCV+ R +  V  L  ++ +PA GL +     G  +HLS K      ++++AD+ +Q + W DD+F    W+  Q   E+               +LWPG   P    +   S++A   R  P    +PV PPVF+  + +L +  E  A  LYW+V++        +  ++S L  A+A NP +AEPH +LAQ  L  GD+  A   A   +D++  WGT WDKR+++  W+AW RVL Q    ++ W  N  G+I LG+V
Sbjct:   30 DDWEKVDAELPALLDLLFSRSAGEAWHKAGTFKNHLLDVYRTLALWDQPRDVRVLGLFHSVYSNEFVALKLFDASAKRAELAAAVGEEAERLIHTFCVMPRTR-FVQKLTEIDAIPAGGLDLEK-SDGSMLHLSQKDAAIFAIVSIADLTEQWHSWVDDVFQGFPWQTRQPVKENWAA------------SLWPGQLMPSNEAWSLASRMARPLRDLPAELGLPV-PPVFDRCRRILTQADEMAAVALYWQVVTRAHAISTPV-AAVSLLKTAIAHNPDIAEPHLVLAQIALTQGDYDTAATHARIGLDILSAWGTAWDKRIAWSGWVAWARVLLQAGRTRS-WPENLGGMIALGMV 369          
The following BLAST results are available for this feature:
BLAST of EWM27271.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109452|gb|EWM27271.1|0.000e+0100.00Tetratricopeptide-like helical [Nannochloropsis ga... [more]
gi|219118345|ref|XP_002179949.1|2.668e-10142.43predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210521241|dbj|GAX19989.1|7.193e-9844.59hypothetical protein FisN_1Lh537 [Fistulifera sola... [more]
gi|1210527010|dbj|GAX14337.1|1.171e-9646.61hypothetical protein FisN_1Hh537 [Fistulifera sola... [more]
gi|470408010|ref|XP_004336092.1|3.280e-9243.27tetratricopeptide repeat domain containing protein... [more]
gi|302810161|ref|XP_002986772.1|1.905e-7939.29hypothetical protein SELMODRAFT_124836 [Selaginell... [more]
gi|302772192|ref|XP_002969514.1|1.926e-7939.29hypothetical protein SELMODRAFT_91578 [Selaginella... [more]
gi|1207996544|ref|NP_001339486.1|1.267e-7738.73uncharacterized protein LOC100193035 [Zea mays] >g... [more]
gi|1179560156|ref|XP_020699999.1|3.637e-7236.74uncharacterized protein LOC110112200 [Dendrobium c... [more]
gi|1011741129|gb|KYO56824.1|7.860e-6536.69hypothetical protein AUP44_21695 [Tistrella mobili... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3448rna3448Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications