EWM27258.1, cds3435 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|585109439|gb|EWM27258.1| (type a von willebrand factor domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 2187.15 bits (5666), Expect = 0.000e+0 Identity = 1065/1065 (100.00%), Postives = 1065/1065 (100.00%), Query Frame = 0
Query: 1 MLVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKTNMKDQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGGYCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFSWPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGLRMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQRYEMSRREHPHNRGLEFSGDMGTGASGRDGLEGGGSYLAGGKGNGEEGRETSEEGAKSQDERLFDPSKSLLSMWEGLRQGLFGEGDHVISGLYVRGFQSWQGACGQPKNGRRRPEEWMLLQEVGALQMPEIPINEMGAYSERLLQMEVFRDPLDEYDPDDDTPEAWKQRKLAVNFGNPFRRPRQHHVPHVEAQQAGDGKDDVGRLPSAEADNEAEVLGPHSSLGEDLPEKWGKGDEAFVYGSDAWPGGVQRRAEGEDGSALLAPSTAEQPHRKRRRLNELPPLPTGRPVPKRHRSRMDRKTTPRAAPPARSVGTVPTAMSSPPLSPLPGPLAPLTPEENDHWSDRVAEEGISETRRKEDPVAVDTGGSLVGPGAGVAASEAVTSLERNSSNAPHKITLPGASTIDPTVSNVRGPDAPHLTSHPPSQHAAIGGAPKRSIEEMLKDRELVTPNAEGWMLAWSKREKRLYYFNIKTNVAVWTAPPGLPAINEDT 1065
MLVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKTNMKDQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGGYCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFSWPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGLRMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQRYEMSRREHPHNRGLEFSGDMGTGASGRDGLEGGGSYLAGGKGNGEEGRETSEEGAKSQDERLFDPSKSLLSMWEGLRQGLFGEGDHVISGLYVRGFQSWQGACGQPKNGRRRPEEWMLLQEVGALQMPEIPINEMGAYSERLLQMEVFRDPLDEYDPDDDTPEAWKQRKLAVNFGNPFRRPRQHHVPHVEAQQAGDGKDDVGRLPSAEADNEAEVLGPHSSLGEDLPEKWGKGDEAFVYGSDAWPGGVQRRAEGEDGSALLAPSTAEQPHRKRRRLNELPPLPTGRPVPKRHRSRMDRKTTPRAAPPARSVGTVPTAMSSPPLSPLPGPLAPLTPEENDHWSDRVAEEGISETRRKEDPVAVDTGGSLVGPGAGVAASEAVTSLERNSSNAPHKITLPGASTIDPTVSNVRGPDAPHLTSHPPSQHAAIGGAPKRSIEEMLKDRELVTPNAEGWMLAWSKREKRLYYFNIKTNVAVWTAPPGLPAINEDT
Sbjct: 1 MLVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKTNMKDQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGGYCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFSWPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGLRMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQRYEMSRREHPHNRGLEFSGDMGTGASGRDGLEGGGSYLAGGKGNGEEGRETSEEGAKSQDERLFDPSKSLLSMWEGLRQGLFGEGDHVISGLYVRGFQSWQGACGQPKNGRRRPEEWMLLQEVGALQMPEIPINEMGAYSERLLQMEVFRDPLDEYDPDDDTPEAWKQRKLAVNFGNPFRRPRQHHVPHVEAQQAGDGKDDVGRLPSAEADNEAEVLGPHSSLGEDLPEKWGKGDEAFVYGSDAWPGGVQRRAEGEDGSALLAPSTAEQPHRKRRRLNELPPLPTGRPVPKRHRSRMDRKTTPRAAPPARSVGTVPTAMSSPPLSPLPGPLAPLTPEENDHWSDRVAEEGISETRRKEDPVAVDTGGSLVGPGAGVAASEAVTSLERNSSNAPHKITLPGASTIDPTVSNVRGPDAPHLTSHPPSQHAAIGGAPKRSIEEMLKDRELVTPNAEGWMLAWSKREKRLYYFNIKTNVAVWTAPPGLPAINEDT 1065
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|553180315|ref|XP_005853384.1| (type a von willebrand factor domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295677|gb|EKU22976.1| type a von willebrand factor domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 644.425 bits (1661), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query: 96 GSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGGYCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFSWPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAAL 406
GSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGGYCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFSWPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAAL
Sbjct: 1 GSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGGYCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFSWPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAAL 311
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|926613333|ref|XP_013771674.1| (PREDICTED: integrator complex subunit 6-like [Limulus polyphemus]) HSP 1 Score: 197.978 bits (502), Expect = 1.465e-48 Identity = 169/590 (28.64%), Postives = 257/590 (43.56%), Query Frame = 0
Query: 2 LVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKTNMK--DQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTP--SPVSTQIPYFAVFKALADATGG--YCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPD---LGAETCGHATKSAQAQSRAQEQ--EAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFS---WPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGL--RMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQR 575
++ F++D +ASM R+ GA + + AK AVE FIK RQ+ + D+Y L+T EE P VK W ++ F + L+ L + G T +G AL AF LLN R+Q GID YGQGRCP+ +EP ++ T G + S Q P+S G +LT++P+RWDQR F ++ LA + ++ R+ GS P SP+ A+ + TGG Y S ++ L + + + V + PD + E T+ Q + AG+ G Q P A+ S H + I G+S WPIPE+FW D LP R AHP+ ++ T+S + L D+Y LE +P + R + W VY+ GS + G FG+L+AS V L +LPY+YP L+ L+ + H P +W+ F S+L P YY + L+R L+++G + VPE LS ++ L+R++ QA++E ++
Sbjct: 3 IILFLVDTSASMNQRT----------YLGARPTLLDVAKDAVERFIKIRQRDSASRGDRYMLLTFEEPPVHVKAGWKENHATFMNELKNLNAI------GVTTMGPALRNAFDLLNVNRMQTGIDTYGQGRCPFYLEPSIIVVITDGGKLSSSDSQHQNLNLPMSSMPGS-----------------ELTKEPFRWDQRLFALVLR------LAGTPYME----RDSGSVVPPDSSPID----------AMCEVTGGRSYAVTSHRVLMQCLESLVQKIQSGVVINFEKIGPDPPPVINEVYSETTEDKQINETPNHKVPAAGQNGLGQQT--PHSITSTAWQSSH-----------------KLIYVQRSAQKGYSVGHWPIPESFWPDLNSPALPPRTAHPVFKFT--CTNSEPMVI--------DNLPFDKYELE-------PSPLTQYILSRKQPTVAWQVYVSGSHK-SSELGHSFGYLKASTTLTCVNLFVLPYNYPTLLPLLDEFFK-----VHRCKAPKEWKQNFESYLKNMPLYYAAPLKRALQRMGAPSLVPENMENCLSYSILNYLKRLKNQAKSEYEK 497
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|762145757|ref|XP_011456158.1| (PREDICTED: integrator complex subunit 6 isoform X3 [Crassostrea gigas] >gi|405977527|gb|EKC41970.1| Integrator complex subunit 6 [Crassostrea gigas]) HSP 1 Score: 193.741 bits (491), Expect = 3.889e-47 Identity = 160/583 (27.44%), Postives = 258/583 (44.25%), Query Frame = 0
Query: 2 LVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKT-NMK-DQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGG--YCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHG-ADPISCAAAVRAILCLNHES-AGFS---WPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGLRMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQR 575
++ F++D +ASM R+ G S + AKA+VE F+K R + N + D+Y L+T E+ P +K W +S F + L+ L ++G T +G AL AF LLN R+Q GID YGQGRCP+ +EP ++ T G G ++ G P ++ + +LT++P+RWDQR F ++ + P+ + +++T P + P A+ D TGG Y ++ ++ L + ++ K+ G +V+ E G + + + G ++Q PP E SP G + P + R ++ + + G+S WPIPEAFW D T LP R AHP++ + + + E + + +Y LE R W V++ GS + G PFG+L+AS V L L+PY+YP L+ L+ + H KWR +F+++L P YY L+R L ++G VP+ LS VI L++++ QA+ E R
Sbjct: 3 IILFLVDTSASMNQRT------------YLGTSLIDIAKASVETFMKIRSRDPNCRWDRYMLLTFEDPPANIKAGWKESHATFVNELKNLQ------TQGLTLMGPALKHAFDLLNINRMQTGIDTYGQGRCPFYLEPAVIIVITDG--------------GKLTTMNG--VQPEINLPMNSVVPGSELTKEPFRWDQRIFGLVLRLPGNVPV-------------DMTTSTYIPSAESHP----LDAMCDVTGGRSYAVHTQKMLNGALES--LVQKVQ--GGVVI-----NFEKIGPDPPTIEVKVENGLDSNGNSKENQDINMPPTIKLEMEEERKANSPMTGLSIPNNSWHNCRKLIYVPRSAQKGYSVGHWPIPEAFWPDTTNSTLPPRSAHPVVKFYCTPCEPMVIGNLPFDKYELEPSPLTQYILE---------------RRQPNSCWQVFINGSAKY-SDVGHPFGYLKASSTLSCVNLFLMPYNYPVLLPLLDELFK-----VHKLKPTQKWRSQFDTYLKTMPSYYAGPLKRALARMGAPNLVPDNMDNSLSYSVITYLKKLKNQAKIEMDR 504
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|762145755|ref|XP_011456157.1| (PREDICTED: integrator complex subunit 6 isoform X2 [Crassostrea gigas]) HSP 1 Score: 193.741 bits (491), Expect = 3.900e-47 Identity = 160/583 (27.44%), Postives = 258/583 (44.25%), Query Frame = 0
Query: 2 LVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKT-NMK-DQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGG--YCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHG-ADPISCAAAVRAILCLNHES-AGFS---WPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGLRMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQR 575
++ F++D +ASM R+ G S + AKA+VE F+K R + N + D+Y L+T E+ P +K W +S F + L+ L ++G T +G AL AF LLN R+Q GID YGQGRCP+ +EP ++ T G G ++ G P ++ + +LT++P+RWDQR F ++ + P+ + +++T P + P A+ D TGG Y ++ ++ L + ++ K+ G +V+ E G + + + G ++Q PP E SP G + P + R ++ + + G+S WPIPEAFW D T LP R AHP++ + + + E + + +Y LE R W V++ GS + G PFG+L+AS V L L+PY+YP L+ L+ + H KWR +F+++L P YY L+R L ++G VP+ LS VI L++++ QA+ E R
Sbjct: 3 IILFLVDTSASMNQRT------------YLGTSLIDIAKASVETFMKIRSRDPNCRWDRYMLLTFEDPPANIKAGWKESHATFVNELKNLQ------TQGLTLMGPALKHAFDLLNINRMQTGIDTYGQGRCPFYLEPAVIIVITDG--------------GKLTTMNG--VQPEINLPMNSVVPGSELTKEPFRWDQRIFGLVLRLPGNVPV-------------DMTTSTYIPSAESHP----LDAMCDVTGGRSYAVHTQKMLNGALES--LVQKVQ--GGVVI-----NFEKIGPDPPTIEVKVENGLDSNGNSKENQDINMPPTIKLEMEEERKANSPMTGLSIPNNSWHNCRKLIYVPRSAQKGYSVGHWPIPEAFWPDTTNSTLPPRSAHPVVKFYCTPCEPMVIGNLPFDKYELEPSPLTQYILE---------------RRQPNSCWQVFINGSAKY-SDVGHPFGYLKASSTLSCVNLFLMPYNYPVLLPLLDELFK-----VHKLKPTQKWRSQFDTYLKTMPSYYAGPLKRALARMGAPNLVPDNMDNSLSYSVITYLKKLKNQAKIEMDR 504
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|762145753|ref|XP_011456156.1| (PREDICTED: integrator complex subunit 6 isoform X1 [Crassostrea gigas]) HSP 1 Score: 193.741 bits (491), Expect = 4.034e-47 Identity = 160/583 (27.44%), Postives = 258/583 (44.25%), Query Frame = 0
Query: 2 LVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKT-NMK-DQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGG--YCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHG-ADPISCAAAVRAILCLNHES-AGFS---WPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGLRMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQR 575
++ F++D +ASM R+ G S + AKA+VE F+K R + N + D+Y L+T E+ P +K W +S F + L+ L ++G T +G AL AF LLN R+Q GID YGQGRCP+ +EP ++ T G G ++ G P ++ + +LT++P+RWDQR F ++ + P+ + +++T P + P A+ D TGG Y ++ ++ L + ++ K+ G +V+ E G + + + G ++Q PP E SP G + P + R ++ + + G+S WPIPEAFW D T LP R AHP++ + + + E + + +Y LE R W V++ GS + G PFG+L+AS V L L+PY+YP L+ L+ + H KWR +F+++L P YY L+R L ++G VP+ LS VI L++++ QA+ E R
Sbjct: 3 IILFLVDTSASMNQRT------------YLGTSLIDIAKASVETFMKIRSRDPNCRWDRYMLLTFEDPPANIKAGWKESHATFVNELKNLQ------TQGLTLMGPALKHAFDLLNINRMQTGIDTYGQGRCPFYLEPAVIIVITDG--------------GKLTTMNG--VQPEINLPMNSVVPGSELTKEPFRWDQRIFGLVLRLPGNVPV-------------DMTTSTYIPSAESHP----LDAMCDVTGGRSYAVHTQKMLNGALES--LVQKVQ--GGVVI-----NFEKIGPDPPTIEVKVENGLDSNGNSKENQDINMPPTIKLEMEEERKANSPMTGLSIPNNSWHNCRKLIYVPRSAQKGYSVGHWPIPEAFWPDTTNSTLPPRSAHPVVKFYCTPCEPMVIGNLPFDKYELEPSPLTQYILE---------------RRQPNSCWQVFINGSAKY-SDVGHPFGYLKASSTLSCVNLFLMPYNYPVLLPLLDELFK-----VHKLKPTQKWRSQFDTYLKTMPSYYAGPLKRALARMGAPNLVPDNMDNSLSYSVITYLKKLKNQAKIEMDR 504
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|762145759|ref|XP_011456159.1| (PREDICTED: integrator complex subunit 6 isoform X4 [Crassostrea gigas]) HSP 1 Score: 193.741 bits (491), Expect = 4.112e-47 Identity = 160/583 (27.44%), Postives = 258/583 (44.25%), Query Frame = 0
Query: 2 LVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKT-NMK-DQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGG--YCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHG-ADPISCAAAVRAILCLNHES-AGFS---WPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGLRMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQR 575
++ F++D +ASM R+ G S + AKA+VE F+K R + N + D+Y L+T E+ P +K W +S F + L+ L ++G T +G AL AF LLN R+Q GID YGQGRCP+ +EP ++ T G G ++ G P ++ + +LT++P+RWDQR F ++ + P+ + +++T P + P A+ D TGG Y ++ ++ L + ++ K+ G +V+ E G + + + G ++Q PP E SP G + P + R ++ + + G+S WPIPEAFW D T LP R AHP++ + + + E + + +Y LE R W V++ GS + G PFG+L+AS V L L+PY+YP L+ L+ + H KWR +F+++L P YY L+R L ++G VP+ LS VI L++++ QA+ E R
Sbjct: 3 IILFLVDTSASMNQRT------------YLGTSLIDIAKASVETFMKIRSRDPNCRWDRYMLLTFEDPPANIKAGWKESHATFVNELKNLQ------TQGLTLMGPALKHAFDLLNINRMQTGIDTYGQGRCPFYLEPAVIIVITDG--------------GKLTTMNG--VQPEINLPMNSVVPGSELTKEPFRWDQRIFGLVLRLPGNVPV-------------DMTTSTYIPSAESHP----LDAMCDVTGGRSYAVHTQKMLNGALES--LVQKVQ--GGVVI-----NFEKIGPDPPTIEVKVENGLDSNGNSKENQDINMPPTIKLEMEEERKANSPMTGLSIPNNSWHNCRKLIYVPRSAQKGYSVGHWPIPEAFWPDTTNSTLPPRSAHPVVKFYCTPCEPMVIGNLPFDKYELEPSPLTQYILE---------------RRQPNSCWQVFINGSAKY-SDVGHPFGYLKASSTLSCVNLFLMPYNYPVLLPLLDELFK-----VHKLKPTQKWRSQFDTYLKTMPSYYAGPLKRALARMGAPNLVPDNMDNSLSYSVITYLKKLKNQAKIEMDR 504
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|1192742592|ref|XP_021000105.1| (integrator complex subunit 6 [Parasteatoda tepidariorum]) HSP 1 Score: 192.971 bits (489), Expect = 8.624e-47 Identity = 209/787 (26.56%), Postives = 334/787 (42.44%), Query Frame = 0
Query: 2 LVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKTNMK--DQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFT-GGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTP--SPVSTQIPYFAVFKALADATGG--YCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPDLGAETCGHATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFS---WPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGL--RMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQKTGGLSQLVIKRLQRIREQARAENQRYEMSRREHPHNRGLEFSGDMGTGASGRDGLEGGGSYLAGGKGNGEEGRETSEEGAKSQ-DERLFDPSKSLLSMWEGLRQGLFGEGDHVISGLYVRG----FQSWQGACGQPKNG------RRRPEEWMLLQEVGAL----QMPEIPINEMGAYSERLLQMEVFRDPLDEYDPDDDTPEAWKQRKLAVNFGNPFRRPRQHHV 761
++ F++D +ASM R+ GA + + AK AVE FIK RQ+ + D+Y L+T EE P +K W +SL F L+ L S G T +G AL AF LLN R+Q GID Y QGRCP+ +EP ++ T GG S T+ VQ+ + + + + +LT++P+RWDQR F ++ + P AD RE S P SPV A+ D TGG Y +S+ ++ L + ++ KL G +V+ E G + +E+ + +L PP SP + + ++ A SC + I G++ WP+PE+FW D++ LP R AHPI+ +S A+ + L D+Y LE +P + R + W V++ S + PFG+L+AS V L ++PY+Y V + + H P +W+ +F+++L P YY + L+R L+++G VP+ LS V+ L+R++ QA+ E ++ +GT + DG+ + N R GA ++ E P + + L+ + + +H + LYV+ +S++ A P+N R R L QM +P+++MG Y E L + F PL E E+ R+ FGNPF+ ++ V
Sbjct: 3 IILFLIDTSASMNQRT----------YLGARPTLLDVAKDAVERFIKIRQRDSASRGDRYMLLTFEEPPANIKAGWKESLATFMTELKNLQ------SVGMTTLGAALKYAFDLLNINRMQTGIDTYSQGRCPFYLEPSIIIVITDGGRLS--TTLGVQEELN---------------LPMHSSVPGSELTKEPFRWDQRLFSLVLRLT-GIPPAD---------REPSSVVPPDNSPVD----------AMCDVTGGRSYAVISQRMLMQCLES--LVQKLQ--GGVVI-----NFEKIGPDPPPLNGEEMVEERSTLKPASP--SLNPPTPAQNGRSSPAVFNMSNNASWQSCR---KLIYVQRSAQKGYTVGHWPLPESFWPDQSSPALPPRTAHPIVKFS----------CANSEPMVIDNLPFDKYELE-------PSPLTQYILSRKQPTVAWQVFVSSSYK-NSDVDYPFGYLKASTSLTCVNLFVMPYNY-----PVLLPLLDDLFKVHRCKPPREWKQQFDNYLKNMPLYYAAPLKRALQRMGAPNLVPDTMENCLSYSVLNYLKRLKNQAKTEFEK---------------LISTVGTKKTISDGI----------RVNPAPQRPF---GASTKLSEMNLTPHLVMNDRFTALKNDI-NDFNHFV--LYVKDKDIKHESYRNAYDIPRNNILDQLARMRSNFLQCSLSHTRLQDEDQMHSLPVSQMGNYQEYL---KRFTPPLREI-------ESIPVRQHM--FGNPFKIDKRMMV 656
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|913320377|ref|XP_013191301.1| (PREDICTED: integrator complex subunit 6 [Amyelois transitella]) HSP 1 Score: 192.2 bits (487), Expect = 2.196e-46 Identity = 167/603 (27.69%), Postives = 260/603 (43.12%), Query Frame = 0
Query: 2 LVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKT--NMKDQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSA--HDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGG--YCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPD----------LGAETCGHATKSAQAQSRAQEQEAGRQG----QSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHE--SAGFSWPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGL--RMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVG-----LHTQVPEQKTGGLSQLVIKRLQRIREQARAENQR 575
++ F++D +ASM R+ G + + AK AVE F+K RQ++ + D+Y L+T EE P +K W ++L F + L+ L L G T +G AL AF +LN R+Q GID YGQGRCP+ +EP ++ T G G +S G E L + C +LTR+P+RWDQR F ++ LA + ++ E + PS S A+ + TGG YC S ++ +++ + + V + PD GAET T A + GR Q+ V + +A+H SC + + + + GF WPIPE+F D LP R AHP++ ++ L+ + + L D+Y LE +P + R + W V++ SG PFG+L+AS V L +LPY+YP L+ L+ + H +W+ F +L + P YY + LRR L K+G L + +PE + LS V+ L+R++ QA+ E ++
Sbjct: 3 IIVFLIDTSASMNQRA----------YLGGRPTLLDVAKGAVETFVKVRQRSPESRGDRYMLLTFEEPPANIKAGWKENLATFINELKNLQCL------GLTTMGAALKHAFDVLNINRMQTGIDTYGQGRCPFYLEPSVIVVITDG--------------GKLSSNAGIQE----EFNLPMNCPIPGSELTREPFRWDQRLFSLVLR------LAGTPAV------ERDTGLVPSDSSP-------IDAMCEVTGGRSYCITSHRMLMQCIDSLVQKVQSGVVINFEKIGPDPPPIDGGANRDGAETTDDITHEADKDVDGDGERNGRWNGGPYQAGVTANQGASAPQAWH--------------SCRRLIYVPRTVAQKGFAVGF-WPIPESFRPDPNAPTLPPRSAHPVVKFTCLSHEP----------MVIDNLPFDKYELE-------PSPLTQFILARKQPTICWQVFVANSGCKNNEVSHPFGYLKASTNLSCVNLFVLPYNYPVLLPLLDELFK-----VHRCKPTPEWKQAFQQYLDRMPSYYVAPLRRALTKMGASSPLLQSLIPENQDNSLSFSVLNYLKRLKNQAKIEFEK 515
BLAST of EWM27258.1 vs. NCBI_GenBank
Match: gi|766921167|ref|XP_011505090.1| (PREDICTED: integrator complex subunit 6-B [Ceratosolen solmsi marchali]) HSP 1 Score: 183.726 bits (465), Expect = 1.451e-43 Identity = 199/812 (24.51%), Postives = 323/812 (39.78%), Query Frame = 0
Query: 2 LVCFILDVNASMGHRSPPSGPHATTNLRGAGLSSFEWAKAAVEYFIKARQKT--NMKDQYFLVTTEEGPGCVKISWGDSLQRFDDNLRLLAPLPADGSKGGTNVGHALSMAFALLNQYRLQHGIDNYGQGRCPWLVEPGCCLLFTGGNSSRPTSSSVQKAIGPVSPFGGDAEAPAPSMTLQLTCSAHDLTRDPYRWDQRFFPFIIHHSPSRPLADSSSLDDSKKREEGSSTTPSPVSTQIPYFAVFKALADATGG--YCSVSESLMGLTLNTDLVMHKLAFVGPMVVLAPD---LGAETCG--HATKSAQAQSRAQEQEAGRQGQSQVALYPPETCGEAFHSPHLTSPAHGADPISCAAAVRAILCLNHESAGFS---WPIPEAFWVDRTLEHLPKRDAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGL--RMTRGMRWPVYLMGSGRMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSASGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVG-----LHTQVPEQKTGGLSQLVIKRLQRIREQARAENQRY--EMSRREHPH--------NRGLE---------FSGDMGTGA--SGRDGLEGGGSYLAGGKGNGEEGRETSEEGAKSQDERLFDPSKSLLSMWEGLRQGLFGEG---DHVISGLYVRGFQSWQGACGQPKNGRRRPEEWMLLQEVGALQMPEIPINEMGAYSERLLQMEVFRDPLDEYDPDDDTPEAWKQRKLAVNFGNPFRRPRQHHVPHVEAQQAG 770
++ F++D +ASM R+ G + + AK+AVE F+K RQ++ + D+Y L+T E+ P +K W ++L F + L+ L + G T +G AL AF +LN R+Q GID YGQGRCP+ +EP ++ T G + Q P+ P P +LT++P+RWDQR F ++ S + + + L ++ SP+ A+ + TGG YC S +M +++ + + V + PD L E+ H+ + + + A YP S P + A+ + + R I GF+ WPIPE+FW D + LP R AHP + ++ S L + L D+Y LE +P + R + W V++ S + G PFG+L+AS V L ++PY+YP L+ L+ + H +WR +F +++ P YY ++LRR L ++G T +P+ LS V+ L+R++ A+ E R E+ ++ + N LE D+ + + RD L ++ G N ++ R GA+S P KSLL +R G ++ YV +P+++MG Y E L +M PL E + TP FGNPF+ ++ V + G
Sbjct: 3 IIVFLIDTSASMNQRA----------YLGGRPTLLDVAKSAVETFVKVRQRSPESRGDRYMLLTFEDTPHNIKAGWKENLATFMNELKNLQCV------GLTTLGTALKNAFDVLNINRMQTGIDTYGQGRCPFYLEPSVIVVITDGGKYTTGNGVHQDFTLPM-------HTPIP---------GSELTKEPFRWDQRLFSLVLRLSGTPAVERDTGL---------VASDASPID----------AMCEVTGGRSYCITSHRMMMQCIDSLVQKVQSGVVINFEKIGPDPLPLANESVNSLHSENDEENEEETGGLTTNGSIAGRNAAYPNANSNSTIGS---MMPNNLANSTAWHSCRRLIYVPRSAQKGFAVGFWPIPESFWPDISASSLPPRSAHPNVKFT----------CTSQEPLVIENLPFDKYELE-------PSPLTQFILARKQPTICWQVFIANSYK-SSEVGHPFGYLKASTNLTCVNLFVMPYNYPVLLPLLDELFK-----VHRLKPSNEWRTQFTNYMRTMPAYYAASLRRALTRMGAPAALAQTLIPDNMDNTLSYSVLNYLKRLKNTAKMEFDRLCNEVISKQVANKSLANGSTNAVLEGLRVTPRATLKKDLLSNSLTDLRDELNKFSGFVVGLVKNHQQQR-----GAQSYRNAFDIPRKSLLDQVVRMRANFLQPGLLHTKLLDDDYVHS----------------------------------MPVSQMGNYQEYLKRMT---PPLREI---ESTPVRQHM------FGNPFKIDKRMMVDEADIDIVG 686 The following BLAST results are available for this feature:
BLAST of EWM27258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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