EWM27250.1, cds3428 (CDS) Nannochloropsis gaditana

Overview
NameEWM27250.1
Unique Namecds3428
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:419602..419756 +
Alignment locationCM002461.1:419869..420304 +
Alignment locationCM002461.1:420413..420520 +
Alignment locationCM002461.1:420639..420806 +
Alignment locationCM002461.1:420939..421331 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27250.1
Productser thr kinase
Orig transcript idgnl|cribi|Naga_100038g35.7705.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:419602..419756 +
CM002461.1supercontigCM002461.1:419869..420304 +
CM002461.1supercontigCM002461.1:420413..420520 +
CM002461.1supercontigCM002461.1:420639..420806 +
CM002461.1supercontigCM002461.1:420939..421331 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR017441Protein_kinase_ATP_BS
IPR020636Ca/CaM-dep_Ca-dep_prot_Kinase
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|585109431|gb|EWM27250.1| (ser thr kinase [Nannochloropsis gaditana])

HSP 1 Score: 848.195 bits (2190), Expect = 0.000e+0
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query:    1 MVFCCCLPPSFEPPCPPPPAYSATQSAQAEGPPVPPTDTAGRAVEHSFSVLSEEELGAAVAGGEGNGNGHHHDSTSARPHADADGLVHVDGENVCETDEEEDGEEHDWDCHMTDLAALTYPPGQAEADPIKVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQRIKDTGEGGEGGGRGPGEALRHLRHLQFPRARVLLGRGLLPLAGGRVGGGSLPVLLPLRAPALPEGWARPPLRGHPGRGSSDPPRGGRRRGRGRGRGEWRGGGQGRPKR 419
            MVFCCCLPPSFEPPCPPPPAYSATQSAQAEGPPVPPTDTAGRAVEHSFSVLSEEELGAAVAGGEGNGNGHHHDSTSARPHADADGLVHVDGENVCETDEEEDGEEHDWDCHMTDLAALTYPPGQAEADPIKVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQRIKDTGEGGEGGGRGPGEALRHLRHLQFPRARVLLGRGLLPLAGGRVGGGSLPVLLPLRAPALPEGWARPPLRGHPGRGSSDPPRGGRRRGRGRGRGEWRGGGQGRPKR
Sbjct:    1 MVFCCCLPPSFEPPCPPPPAYSATQSAQAEGPPVPPTDTAGRAVEHSFSVLSEEELGAAVAGGEGNGNGHHHDSTSARPHADADGLVHVDGENVCETDEEEDGEEHDWDCHMTDLAALTYPPGQAEADPIKVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQRIKDTGEGGEGGGRGPGEALRHLRHLQFPRARVLLGRGLLPLAGGRVGGGSLPVLLPLRAPALPEGWARPPLRGHPGRGSSDPPRGGRRRGRGRGRGEWRGGGQGRPKR 419          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|673019258|ref|XP_008863590.1| (CAMKK protein kinase [Aphanomyces invadans] >gi|574480504|gb|ETW07497.1| CAMKK protein kinase [Aphanomyces invadans])

HSP 1 Score: 172.94 bits (437), Expect = 6.587e-47
Identity = 88/180 (48.89%), Postives = 115/180 (63.89%), Query Frame = 0
Query:  131 KVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQ 310
            +VNEY +   LG GAF  VKR  R V     +++A KIMS+  L R K  V    G  M V T +D +  EI IMR LYHRN+VLLFEVINDP+ D I++I+EY+  G  M Y   +K F SP+TGG L    A +   G+V G++YLH +G+CHRDIKP+N+LL    +  ++DFGCAQ
Sbjct:   24 RVNEYFMMENLGKGAFAKVKRCERRVENTNPRSFAAKIMSKSALHRMKEYVRE--GESMRVVTALDKVEAEIEIMRTLYHRNIVLLFEVINDPASDKIYLILEYMSKGPCMVYTPASKTFHSPITGGPLTEELAKEHVRGIVQGVKYLHSRGVCHRDIKPDNILLNADNRCHLSDFGCAQ 201          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|698785703|ref|XP_009825895.1| (CAMKK protein kinase [Aphanomyces astaci] >gi|574118723|gb|ETV84203.1| CAMKK protein kinase [Aphanomyces astaci])

HSP 1 Score: 167.933 bits (424), Expect = 5.100e-45
Identity = 87/193 (45.08%), Postives = 115/193 (59.59%), Query Frame = 0
Query:  131 KVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQRIKDTGEGGEGGG 323
            +VNEY +   LG GAF  VKR  R V     + +A KIMS+  L+R K  V    G  M   T +D +  EI +MR LYHRN+VLLFEVINDP  D I++I+EY+  G  M Y+  +K F SP+T G L    A +    +V G++YLH +G+CHRDIKP+N+LL    +  I+DFGCAQ    T +     G
Sbjct:   23 RVNEYFMKESLGKGAFAKVKRCERRVENAQPRPFAAKIMSKSALQRMKEYVRV--GESMRAVTALDKVEAEIEVMRTLYHRNIVLLFEVINDPGSDKIYLILEYMSTGPCMVYNSVSKAFHSPITRGPLTEEWAKQHMRDIVQGVKYLHARGVCHRDIKPDNILLNADNRCHISDFGCAQSFLPTDKITNTLG 213          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|813157285|ref|XP_012201991.1| (CAMKK protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641533218|gb|KDO27213.1| CAMKK protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 163.696 bits (413), Expect = 2.149e-43
Identity = 84/182 (46.15%), Postives = 112/182 (61.54%), Query Frame = 0
Query:  129 PIKVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQ 310
            P  VNEY +   LG GAF  VK   R V   P + +A+KI+S+  L + K  V     + M   T ++ +  EI IM  LYHRNVVLLFEVINDP  D I++++E++  G  M +   +K F SP+TGGVL    A      L+ G+ YLHG+G+CHRDIKP+NLLL D  +  ++DFGCAQ
Sbjct:   19 PDVVNEYHIKDLLGRGAFAKVKLCERVVDGAPPRPFALKILSKPALAKMKEYVRD--DTSMRAVTALEKVEVEIAIMATLYHRNVVLLFEVINDPRSDKIYLVLEHMAKGPCMVWRAASKLFESPITGGVLHEDLARNHVLDLLHGVSYLHGRGVCHRDIKPDNLLLNDEDRCHLSDFGCAQ 198          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|1173943792|gb|OQR92600.1| (ser/thr kinase [Thraustotheca clavata])

HSP 1 Score: 163.31 bits (412), Expect = 2.198e-43
Identity = 83/199 (41.71%), Postives = 116/199 (58.29%), Query Frame = 0
Query:  125 AEADPIKVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQRIKDTGEGGEGGG 323
            A  D   VNEY +   LG G F  VKR  R V     + +A+KI+S+  L + K  V    G+ M   T +D +  EI  +  LYHRN+VLLFEVINDPS D I+M++E ++G   M ++ + K F SP+T GVL    A      ++ G++YLHG GICHRDIKP+N+LL    +  ++DFGCAQ+  +     +  G
Sbjct:   13 AHVDGSNVNEYVLHELLGKGTFAKVKRCERCVDGTEPRPFAMKILSKAALSKMKEYVRD--GTSMRAVTALDKVEQEISTLSCLYHRNIVLLFEVINDPSNDKIWMVLELMQGP-CMLWNSEDKVFHSPITNGVLTEEVARTHVLDIIHGVEYLHGLGICHRDIKPDNILLNQDNRCHLSDFGCAQKYNENAMVTDTAG 208          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|669145080|ref|XP_008608102.1| (CAMKK protein kinase [Saprolegnia diclina VS20] >gi|530740268|gb|EQC38510.1| CAMKK protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 161.77 bits (408), Expect = 1.045e-42
Identity = 82/183 (44.81%), Postives = 113/183 (61.75%), Query Frame = 0
Query:  129 PIKVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQR 311
            P  VNEY V   LG GAF  VK   R V   P + +A+KI+S+  L + K  +    G+ M   T ++ +  E+ IM +LYHRNVVLLFEVINDP  D I++++E++  G  M +   +K F SP+T  VL    A      L+ G+ YLHG+G+CHRDIKP+NLLL D  +  ++DFGCAQ+
Sbjct:   18 PDVVNEYHVKDLLGRGAFAKVKLCERVVDGAPPRPFALKILSKPALAKMKEYIRD--GTSMRAVTALEKVEIEVAIMSNLYHRNVVLLFEVINDPRSDKIYLVLEHMAKGPCMVWQAASKLFESPVTRDVLDEDLARSHVLDLLHGVTYLHGQGVCHRDIKPDNLLLNDEGRCHLSDFGCAQK 198          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|1173936592|gb|OQR87508.1| (ser/thr kinase [Achlya hypogyna])

HSP 1 Score: 160.229 bits (404), Expect = 3.961e-42
Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 0
Query:  132 VNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQ 310
            VNEY +   LG GAF  VKR  R       + +A+KI+S+  L + K  +    G  M   + +D    EI I+  LYHRNVVLLFEVINDP  D I++++E +E G  M +    K FRSPL+GG+L    A +    ++ G+ YLH +GICHRDIKP+N+LL    +  ++DFGCAQ
Sbjct:   22 VNEYHIQELLGRGAFAKVKRCERRTAESAPRPFALKILSKAALGKMKEYIRD--GDGMRAVSALDKAEREIDILSTLYHRNVVLLFEVINDPRSDKIYLVLELMEKGPCMLWSADIKAFRSPLSGGILDEELARRHILDIIQGVGYLHARGICHRDIKPDNILLNADGRCHLSDFGCAQ 198          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|673019260|ref|XP_008863591.1| (CAMKK protein kinase, variant [Aphanomyces invadans] >gi|574480505|gb|ETW07498.1| CAMKK protein kinase, variant [Aphanomyces invadans])

HSP 1 Score: 150.984 bits (380), Expect = 1.287e-39
Identity = 81/183 (44.26%), Postives = 107/183 (58.47%), Query Frame = 0
Query:  107 DWDCHMTDLAALTYPPGQAEADPIKVNEYAVDGFLGAGAFGNVKRARREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIK 289
            +W C       +T     ++    +VNEY +   LG GAF  VKR  R V     +++A KIMS+  L R K  V    G  M V T +D +  EI IMR LYHRN+VLLFEVINDP+ D I++I+EY+  G  M Y   +K F SP+TGG L    A +   G+V G++YLH +G+CHRDIK
Sbjct:    6 EWQC------LITAHEDASQDGTDRVNEYFMMENLGKGAFAKVKRCERRVENTNPRSFAAKIMSKSALHRMKEYVRE--GESMRVVTALDKVEAEIEIMRTLYHRNIVLLFEVINDPASDKIYLILEYMSKGPCMVYTPASKTFHSPITGGPLTEELAKEHVRGIVQGVKYLHSRGVCHRDIK 180          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|299471303|emb|CBN79129.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 155.992 bits (393), Expect = 3.492e-39
Identity = 100/266 (37.59%), Postives = 136/266 (51.13%), Query Frame = 0
Query:   96 ETDEEEDGEEHDWDCHMTDLAALTYPPGQAEADPIKVNEYAVDGFLGAGAFGNVKRARREVG---PPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVIN------DPSEDSIFMIMEYLEGGISMDYDKKTKRFRSP---------------LTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQRIK---------DTGEGGEGGGRGPGE 328
            E+ + +  EE  WDC  T+ A  +    + E     VNEY +   LG G++G V    R VG     P++ +A+K+MS+ RLRR  S  ++V    M   T  + MR EI +MRHLYHR+VVLLFEV+       D  E  + M+ EY+EGG +M +D ++  F+ P                 G       A  LF  L+ GL YLHGK I HRD+KP+NLL+ +   LRI DFGCA+ +K             G E  GR  GE
Sbjct:   49 ESKQPQQQEERPWDCLFTNNARWS----KNEEGQQTVNEYVILEELGKGSYGRVYLCERRVGDGVATPWRRFAMKVMSKPRLRRL-SEYVNVPAGGMRKVTAEEKMRQEIEVMRHLYHRSVVLLFEVLEEQDGWEDGQEGRVCMVQEYMEGGPTMTFDDESGLFKRPDGGGSGTKAGGGGGAGAGSFYSEDEAKPLFRDLLQGLLYLHGKNIVHRDVKPDNLLIFENGTLRICDFGCARYVKIVRRQPSKSKDANGSEAMGRCQGE 309          
BLAST of EWM27250.1 vs. NCBI_GenBank
Match: gi|145485963|ref|XP_001428989.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124396078|emb|CAK61591.1| unnamed protein product (macronuclear) [Paramecium tetraurelia])

HSP 1 Score: 152.91 bits (385), Expect = 3.005e-38
Identity = 76/182 (41.76%), Postives = 111/182 (60.99%), Query Frame = 0
Query:  132 VNEYAVDGFLGAGAFGNVKRA-RREVGPPPYQTYAIKIMSRHRLRRFKSSVMSVGGSHMEVKTGIDMMRNEIRIMRHLYHRNVVLLFEVINDPSEDSIFMIMEYLEGGISMDYDKKTKRFRSPLTGGVLPPPTACKLFFGLVAGLQYLHGKGICHRDIKPENLLLTDGTKLRITDFGCAQRI 312
            +N+Y  D FLG GAFG VK A +R  G    Q YAIKIM + +LRR +  +    G +M +K  +  +R EI IM+ L H+N++ LFEVI++P+ D +FM++EY EGG  +++D    +F       VL  P   ++F   + GL YLH  G+ HRD+KP+N+LLTD    +I DFG +  +
Sbjct:   68 INDYIFDEFLGEGAFGKVKLAFKRSSG----QKYAIKIMRKSKLRRQREYIKDAKG-NMVIKDALQDVRREIAIMKKLRHKNLIQLFEVIDNPNNDKLFMVLEYAEGGQVIEWDDDECKFYQVNESVVLDEPLLNQIFRDCIKGLNYLHKNGVVHRDLKPQNVLLTDNKTAKIADFGVSTMV 244          
The following BLAST results are available for this feature:
BLAST of EWM27250.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109431|gb|EWM27250.1|0.000e+0100.00ser thr kinase [Nannochloropsis gaditana][more]
gi|673019258|ref|XP_008863590.1|6.587e-4748.89CAMKK protein kinase [Aphanomyces invadans] >gi|57... [more]
gi|698785703|ref|XP_009825895.1|5.100e-4545.08CAMKK protein kinase [Aphanomyces astaci] >gi|5741... [more]
gi|813157285|ref|XP_012201991.1|2.149e-4346.15CAMKK protein kinase [Saprolegnia parasitica CBS 2... [more]
gi|1173943792|gb|OQR92600.1|2.198e-4341.71ser/thr kinase [Thraustotheca clavata][more]
gi|669145080|ref|XP_008608102.1|1.045e-4244.81CAMKK protein kinase [Saprolegnia diclina VS20] >g... [more]
gi|1173936592|gb|OQR87508.1|3.961e-4244.13ser/thr kinase [Achlya hypogyna][more]
gi|673019260|ref|XP_008863591.1|1.287e-3944.26CAMKK protein kinase, variant [Aphanomyces invadan... [more]
gi|299471303|emb|CBN79129.1|3.492e-3937.59conserved unknown protein [Ectocarpus siliculosus][more]
gi|145485963|ref|XP_001428989.1|3.005e-3841.76hypothetical protein [Paramecium tetraurelia strai... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3437rna3437Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications