EWM27269.1, cds3417 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|585109450|gb|EWM27269.1| (UPF0103/Mediator of ErbB2-driven cell motility [Nannochloropsis gaditana]) HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query: 1 MGKDGYIRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQGVSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYASAVATTLMAGNDARGNGGAKPFMT 323
MGKDGYIRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQGVSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYASAVATTLMAGNDARGNGGAKPFMT
Sbjct: 1 MGKDGYIRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQGVSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYASAVATTLMAGNDARGNGGAKPFMT 323
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|443695939|gb|ELT96731.1| (hypothetical protein CAPTEDRAFT_154277 [Capitella teleta]) HSP 1 Score: 342.813 bits (878), Expect = 1.091e-114 Identity = 161/301 (53.49%), Postives = 215/301 (71.43%), Query Frame = 0
Query: 7 IRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQG-VSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYASAVATTL 306
+RKASH+GSWYT GE L K+L +WL +A + +A+IAPHAGYSY G +AHAY +DPS + RVFILGPSHHV L CA++ A +TP+ L++D + EL + +F+ M+ + DEDEHSIEMHLPYVA ++ QG +++P+LVGSL+P +EA YGRI ++YL+DP NLF++S+DFCHWG+RF+Y +D++ G DI++ IE LDR GM LIE+ DP AFT YL QY NTICGRHP+GV L + + LRE G + F++YAQSS+C+ DSSVSYASA T +
Sbjct: 4 VRKASHAGSWYTGDGEGLNKELGKWLSKAPAGGEH------ARAIIAPHAGYSYCGACSAHAYKQIDPSRVHRVFILGPSHHVRLNGCAITAAEKYQTPLYDLTIDAQISEELYSTSMFEKMSNQTDEDEHSIEMHLPYVAKVMQSRQGHFTVIPVLVGSLNPDKEAAYGRIFSRYLADPNNLFVISSDFCHWGQRFRYTYYDKSKG-DIYKSIEHLDRMGMNLIEEMDPPAFTAYLEQYGNTICGRHPIGVLLNSIKCLRESRGNGHRYSLHFLKYAQSSQCLTNKDSSVSYASAALTIV 297
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|908418905|ref|XP_013070775.1| (PREDICTED: protein MEMO1-like [Biomphalaria glabrata] >gi|908418907|ref|XP_013070776.1| PREDICTED: protein MEMO1-like [Biomphalaria glabrata] >gi|908418909|ref|XP_013070777.1| PREDICTED: protein MEMO1-like [Biomphalaria glabrata] >gi|908418911|ref|XP_013070778.1| PREDICTED: protein MEMO1-like [Biomphalaria glabrata]) HSP 1 Score: 327.405 bits (838), Expect = 1.368e-108 Identity = 156/303 (51.49%), Postives = 211/303 (69.64%), Query Frame = 0
Query: 1 MGKDGYIRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQG-VSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREG-GKEGLDVRVEFVRYAQSSRCMHETDSSVSYASA 301
M K+G IRKASH+GSWY++SG L QL WL S +T S + KA+IAPHAGY + G A+AY +DP+ ++RVFILGPSHHV + CA+SG + ETP+ L +D+ V EL A F+TM+ DE EHSIEMHLPY+A ++ +G +IVPILVGSL P E YG+IL+ YL +P NLF++S+DFCHWG+RF Y +++++G+ I + IE LDR GM +IE+ DP FT YL+ ++NTICGRHP+G+ L A L++ GL + ++F++Y QSS+C DSSVSYASA
Sbjct: 1 MSKNGKIRKASHAGSWYSESGNELNAQLGSWL------SQATESSKPAKAIIAPHAGYFFCGACGAYAYRQVDPNAVKRVFILGPSHHVRMSKCALSGTDIYETPLYNLVIDKKVYEELYATSAFETMSISTDEAEHSIEMHLPYIAKVMESRRGQFTIVPILVGSLSPEMEMKYGQILSSYLKEPGNLFVISSDFCHWGKRFSYTYYEKSHGK-IWQSIEALDRMGMDIIEKMDPSNFTKYLQTFQNTICGRHPIGILLNAIDKLKQSTNSNGLKMELKFLKYDQSSKCESPNDSSVSYASA 296
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|410901597|ref|XP_003964282.1| (PREDICTED: protein MEMO1 [Takifugu rubripes]) HSP 1 Score: 326.635 bits (836), Expect = 1.910e-108 Identity = 161/301 (53.49%), Postives = 207/301 (68.77%), Query Frame = 0
Query: 1 MGKDGYIRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAH-LVGEVQGVSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYAS 300
M K G R+ASHSGSWY+ SG L QL +WL +A+S +R +A+IAPHAGYSY G AAHAY +DP+V +RVFILGPSHHV+L CA+S A + TP+ + +D+ V AEL LF M + DEDEHSIEMHLPY A + SIVPILVG+L +E YG++L+KYL+DP+NLF++S+DFCHWG RF Y +D + GE I+ IE LD+ GM +IEQ DP +F+ Y+++YRNTICGRHP+GV L A LR K GLD+ F+ YAQS +C + SSVSYA+
Sbjct: 1 MSKPGLYREASHSGSWYSASGSQLNAQLEDWLSKANS------KRRPARAIIAPHAGYSYCGACAAHAYKQVDPTVTRRVFILGPSHHVHLTCCALSSAEIYRTPLYDMRIDQKVYAELWKTGLFDRMNIKTDEDEHSIEMHLPYTAKAMESRKDDFSIVPILVGALSENKEHEYGKLLSKYLADPSNLFVISSDFCHWGNRFHYTYYDESQGE-IYRSIEHLDKMGMGIIEQLDPPSFSNYIKKYRNTICGRHPIGVLLNAVAELR---KSGLDMNFSFLNYAQSGQCRNWEQSSVSYAA 291
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|928026247|ref|XP_013861398.1| (PREDICTED: protein MEMO1 isoform X2 [Austrofundulus limnaeus] >gi|928026249|ref|XP_013861399.1| PREDICTED: protein MEMO1 isoform X2 [Austrofundulus limnaeus]) HSP 1 Score: 325.094 bits (832), Expect = 9.816e-108 Identity = 159/294 (54.08%), Postives = 211/294 (71.77%), Query Frame = 0
Query: 8 RKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAH-LVGEVQGVSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYAS 300
R+ASH+GSWY+ SG L QL WL +A S + R +A+IAPHAGY+Y G AAHAY +DPS+ +RVFILGPSHHV L CA++ A + TP+ L +D+ V A+LL LF+ M+ + DEDEHSIEMHLPY A + +SIVP+LVG+L ++E YG++L+KYL+DP+NLFI+S+DFCHWG+RF+Y +D + GE I+ IE LD+ GM++IEQ DP +FT YL++YRNTICGRHP+GV L A LR K GL++ F+ YAQSS+C + DSSVSYA+
Sbjct: 8 REASHAGSWYSASGSQLNAQLEGWLSQAQS------TIRPARAIIAPHAGYTYCGACAAHAYKQVDPSITRRVFILGPSHHVPLSRCALTPADIYRTPLYDLRIDQKVNADLLKTGLFEKMSLQTDEDEHSIEMHLPYTAKAMESHKDELSIVPVLVGALSESKELEYGKLLSKYLADPSNLFIISSDFCHWGQRFRYTYYDESQGE-IYRSIEHLDKMGMSIIEQLDPMSFTNYLKKYRNTICGRHPIGVLLNAVAELR---KTGLEMNFSFLNYAQSSQCRNWQDSSVSYAA 291
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|974100069|ref|XP_015248715.1| (PREDICTED: protein MEMO1 [Cyprinodon variegatus]) HSP 1 Score: 323.939 bits (829), Expect = 2.509e-107 Identity = 163/294 (55.44%), Postives = 208/294 (70.75%), Query Frame = 0
Query: 8 RKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAH-LVGEVQGVSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYAS 300
R+ASH+GSWY+ SG L QL WL +A S + R +A+IAPHAGY+Y G AAHAY +DPSV +RVFILGPSHHV L CA+S A V TP+ L +D+ V A+L LF+ M + DEDEHSIEMHLPY A + SIVP+LVG+L ++E YGR+L+KYL+DP+NLFI+S+DFCHWG+RF+Y +D + GE I+ IE LD+ GM++IEQ DP +FT YL++YRNTICGRHP+GV L A LR K GLD+ F+ YAQSS+C + DSSVSYA+
Sbjct: 8 REASHAGSWYSASGSQLNAQLEGWLSQAQS------TIRPARAIIAPHAGYTYCGACAAHAYKQVDPSVTRRVFILGPSHHVPLSRCALSPAEVYRTPLYDLRIDQKVYADLWKTGLFERMTLQTDEDEHSIEMHLPYTAKAMESHKDEFSIVPVLVGALSESKEQEYGRLLSKYLADPSNLFIISSDFCHWGQRFRYTYYDESQGE-IYRSIEHLDKMGMSIIEQLDPISFTNYLKKYRNTICGRHPIGVLLNAVAELR---KSGLDMNFSFLNYAQSSQCRNWQDSSVSYAA 291
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|906466869|gb|KNC28226.1| (hypothetical protein FF38_14129 [Lucilia cuprina]) HSP 1 Score: 323.168 bits (827), Expect = 5.309e-107 Identity = 157/294 (53.40%), Postives = 207/294 (70.41%), Query Frame = 0
Query: 8 RKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQG-VSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYAS 300
RKASH+GSWYT S L +QL WL ++T S +A+IAPHAGY+Y G A AY + P+V++R+FILGPSHHV LR CA+S A C+TP+ L +D V AEL F M + DE+EHSIEMHLPY+A ++ + + +IVPILVGSL+P QEA+YGR+LA Y +DP NLF++S+DFCHWG RF Y +DRA G I++ IE LD+QGM +IE P+ FT YLR++ NTICGRHP+GV L A + L+E +G ++ +F++YAQSS+C + DSSVSYAS
Sbjct: 4 RKASHAGSWYTDSASELSRQLDNWL------GAATLSHGPARAIIAPHAGYTYCGACGAFAYRQVSPAVVKRIFILGPSHHVRLRGCALSIAKKCKTPLYDLKIDTDVNAELEKTGHFSWMDMKTDENEHSIEMHLPYIAKVMEDFKDHFTIVPILVGSLNPDQEALYGRLLANYFTDPQNLFVISSDFCHWGHRFNYTYYDRACGP-IYKSIEKLDKQGMDIIETLKPETFTAYLREFNNTICGRHPIGVMLSAIKVLQE---QGYNMSFKFLKYAQSSQCKNMDDSSVSYAS 287
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|1098691154|ref|XP_018803074.1| (PREDICTED: protein MEMO1 [Bactrocera latifrons]) HSP 1 Score: 322.783 bits (826), Expect = 6.837e-107 Identity = 156/295 (52.88%), Postives = 206/295 (69.83%), Query Frame = 0
Query: 7 IRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQG-VSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYAS 300
+RKA+HSGSWYT G L +QL WL ++ S P+ +A+IAPHAGY+Y G A AY + P+V++R+FILGPSHHV LR CA+S A V +TP+ L++D + AEL F M + DEDEHSIEMHLPY+A ++ + + +IVPILVGSL+P QE +YG +LA Y +DP NLF++S+DFCHWG RF Y +DR+ G+ IH IE LD+ GMA+IE +P AFT YLR+Y NTICGRHP+GV L + +AL+ G + + F++YAQSS+C DSSVSYAS
Sbjct: 4 VRKATHSGSWYTNLGSELSRQLDRWL--GAAELSHGPA----RAIIAPHAGYTYCGACGAFAYRQVSPAVVKRIFILGPSHHVRLRGCALSTAKVYKTPLYDLTIDTQINAELEKTGHFSWMDMKTDEDEHSIEMHLPYIAKVMEDFKDQFTIVPILVGSLNPDQETLYGDLLANYFTDPQNLFVISSDFCHWGHRFNYTYYDRSCGQ-IHSSIEKLDKNGMAIIETLNPSAFTEYLRKYNNTICGRHPIGVMLNSVKALQNQGYSNMSFK--FLKYAQSSQCKDMNDSSVSYAS 289
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|198433196|ref|XP_002131141.1| (PREDICTED: protein MEMO1 [Ciona intestinalis]) HSP 1 Score: 322.398 bits (825), Expect = 9.179e-107 Identity = 155/294 (52.72%), Postives = 207/294 (70.41%), Query Frame = 0
Query: 8 RKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQG-VSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYAS 300
R+ASH+GSWY GE L QLS+WL +AS ++ R +A+I+PHAGYSY G AAHA+ +DP+ +++VFILGPSHH YL+ CA+S S TP+ L +D+ V EL F+TM+Q VDEDEHSIEM LPY+A ++ +G +I+PILVGSLD E +YG ILAKY+++P N+F++S+DFCHWGRRFQY +D +GE I++ IE LDR+GM LIE DP+ F YL Y+NTICGRHP+ V L A + + G GL + +F+ Y QSS+C +DSSVSYA+
Sbjct: 4 RRASHAGSWYEGKGEDLDMQLSKWLSDASGSN-----HRPARAIISPHAGYSYCGSCAAHAFSQIDPNTVEKVFILGPSHHFYLKECALSPTSTYITPLYNLKIDQEVYQELYGTGKFRTMSQSVDEDEHSIEMQLPYIAKVMESKKGQFTIIPILVGSLDQASEKLYGEILAKYMNNPNNVFVISSDFCHWGRRFQYTRYDEQHGE-IYKSIEALDRKGMQLIENLDPEGFYEYLAAYKNTICGRHPIAVMLNAVKTAQNGN--GLRLEFKFLDYKQSSKCRVHSDSSVSYAA 289
BLAST of EWM27269.1 vs. NCBI_GenBank
Match: gi|1168935313|ref|XP_020510943.1| (protein MEMO1 [Labrus bergylta]) HSP 1 Score: 322.398 bits (825), Expect = 9.290e-107 Identity = 164/301 (54.49%), Postives = 208/301 (69.10%), Query Frame = 0
Query: 1 MGKDGYIRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAH-LVGEVQGVSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQALREGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYAS 300
M R+ASH+GSWY+ SG L QL WL +A S S R +A+IAPHAGY+Y G AAHAY +DPSV +RVFILGPSHHV L CA+S A V TP+ L +D+ V ++L LF+ M+ + DEDEHSIEMHLPY A + SIVP+LVG+L ++E YG++L+KYL+DP+NLFI+S+DFCHWG+RF+Y +D A GE I+ IE LDR GM +IEQ DP +FT YL++YRNTICGRHP+GV L A LR K GL++ F+ YAQSS C + DSSVSYA+
Sbjct: 1 MSNRPVCREASHAGSWYSASGSQLNAQLEGWLSKAES------SIRPARAIIAPHAGYTYCGACAAHAYKQVDPSVTRRVFILGPSHHVPLSRCALSPADVYRTPLYDLRIDQKVYSDLWKTGLFERMSIQTDEDEHSIEMHLPYTAKAMESHKDEFSIVPVLVGALSESREQEYGKLLSKYLADPSNLFIISSDFCHWGQRFRYTYYDEAQGE-IYRSIEHLDRMGMGIIEQLDPMSFTNYLKKYRNTICGRHPIGVLLNAVAELR---KSGLEMNFSFLNYAQSSECRNWQDSSVSYAA 291 The following BLAST results are available for this feature:
BLAST of EWM27269.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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