EWM27251.1, cds3403 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|585109432|gb|EWM27251.1| (haloacid dehalogenase superfamily protein [Nannochloropsis gaditana]) HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query: 1 MSSVTIIHFNTCRPIKTFMRDSVALVLLWLLLVALIHSGISWSSSGTLLSKAFRPNSEHLPLSRPRRHLGFGPPTSVVMVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGFSRILSPHWSAPSHPAMGKKVVVGSGGGEGKGGRGGGGPLPRIPSTHAGVPASQEIGSVGLQLYRRTEGSKAAEARS 344
MSSVTIIHFNTCRPIKTFMRDSVALVLLWLLLVALIHSGISWSSSGTLLSKAFRPNSEHLPLSRPRRHLGFGPPTSVVMVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGFSRILSPHWSAPSHPAMGKKVVVGSGGGEGKGGRGGGGPLPRIPSTHAGVPASQEIGSVGLQLYRRTEGSKAAEARS
Sbjct: 1 MSSVTIIHFNTCRPIKTFMRDSVALVLLWLLLVALIHSGISWSSSGTLLSKAFRPNSEHLPLSRPRRHLGFGPPTSVVMVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGFSRILSPHWSAPSHPAMGKKVVVGSGGGEGKGGRGGGGPLPRIPSTHAGVPASQEIGSVGLQLYRRTEGSKAAEARS 344
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|1026969507|ref|XP_016609396.1| (HAD phosphatase, family IIIA [Spizellomyces punctatus DAOM BR117] >gi|907095703|gb|KND01357.1| HAD phosphatase, family IIIA [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 200.29 bits (508), Expect = 1.115e-59 Identity = 101/212 (47.64%), Postives = 143/212 (67.45%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHF--KKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVH-TQILTPEGDNKVAAIVRRLENGFSRILSPH-WSAPSHPAMGK 286
MVQSLN + +IG+++R+PSL++PH+SV I +++F L+ AGI+ V+FDKDNTITAPYV++VH A ++E+ K FG +L+I+SNSAGT DD GH A +E++LG+PVLRH +KKP + +F C + ++GDR TD+++GN GMLTVH T+I+T EGDNK+AA++R+LE L S P HPA K
Sbjct: 1 MVQSLNFSSLASIGKIVRSPSLLIPHLSVPDIRYINFMALKAAGIRAVVFDKDNTITAPYVEQVHPTFAKSWESCKDTFGQDRLLIVSNSAGTPDDVGHKKAATVEAALGIPVLRHTLKKPAGGDALSSYFGCPSHC--------IAVVGDRAFTDIVYGNLNGMLTVHVTKIVTEEGDNKIAALIRKLEYPLVNWLRQRGLSPPHHPAFEK 204
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|299470088|emb|CBN79265.1| (haloacid dehalogenase (HAD) superfamily protein [Ectocarpus siliculosus]) HSP 1 Score: 197.208 bits (500), Expect = 2.615e-57 Identity = 104/189 (55.03%), Postives = 131/189 (69.31%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHF--KKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLE 265
M QS N Q V ++ +V+R+P+L +PH+S+ HIG LDFE L+ G KGVIFDKDNT+TAPY D VH V + VF + I+SNSAGT DD +A AIRIE++LG+PVLRH KKPG I +VL F K G ++LC +GDRLLTDV++GN GMLTVHTQ LT +GDN+ AA+ R LE
Sbjct: 74 MGQSFNAQAVSSMSRVVRHPALAVPHLSLAHIGRLDFEGLKAMGCKGVIFDKDNTLTAPYEDTVHPLVEEGLKRCMEVF-EGSVCIMSNSAGTRDDPDYADAIRIETALGIPVLRHDEKKPGGIADVLAFFEGKDPEGGTVRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLE 261
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|551581975|ref|XP_005776467.1| (hypothetical protein EMIHUDRAFT_101242 [Emiliania huxleyi CCMP1516] >gi|485628571|gb|EOD24038.1| hypothetical protein EMIHUDRAFT_101242 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 189.119 bits (479), Expect = 2.668e-55 Identity = 112/222 (50.45%), Postives = 138/222 (62.16%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVI-RNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGF-SRILSPHWSAPSHPAMGKKVVVGSGGGEGK 298
MVQSLNL V +VI R P+L LPH V+ I LDF LR+AG GVIFDKDNT+TAPY DEVH ++AG+ FG ++ ++SNSAGT DD G AA +E++LGV VLR KKP I V HF +C D T L ++GDR LTDV++GN GMLTVHTQ LT EGDN+VA +RR E+ +R + AP HP G GG G+
Sbjct: 1 MVQSLNLAAVRTTARVILREPALALPHQRVRDISELDFAELREAGCHGVIFDKDNTLTAPYSDEVHPRLAGSLRRCVETFGAERVAVLSNSAGTPDDPGGVAADALEAALGVHVLRRRHKKPRGIESVQRHF--QC--DGTA--LLMVGDRYLTDVVFGNMHGMLTVHTQQLTTEGDNRVAQAMRRAEDWLVARYVRRGVRAPPHPLALNS--WGPGGARGR 214
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|831769435|ref|XP_012752705.1| (hypothetical protein SAMD00019534_075540 [Acytostelium subglobosum LB1] >gi|735853337|dbj|GAM24379.1| hypothetical protein SAMD00019534_075540 [Acytostelium subglobosum LB1]) HSP 1 Score: 180.259 bits (456), Expect = 5.695e-52 Identity = 83/209 (39.71%), Postives = 127/209 (60.77%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGFSRILSPHWSAPSHPAMGKK 287
MVQS N + ++G+V N SL++PH+ ++ + +DF LR G V+FDKDNT+T PY D V+ + A E ++RVFGP+ + ++SNSAG+ DD A R+E L +PV++H KKP I V++HF DT + ++GDR LTD+++GN GM+T++T +T GDN ++R E F H++AP HP ++
Sbjct: 1 MVQSFNFAAMRSLGKVFYNRSLVIPHLMLQDVRSIDFARLRSMGFDAVLFDKDNTLTEPYADHVYAPFSEALEHARRVFGPKGIAVLSNSAGSSDDHDFVEATRLERELCIPVIKHGTKKPEGIEAVIKHFN-----DTEPSRIIMVGDRFLTDILFGNLYGMMTIYTSPITSVGDNGAVKLIRDKEKSFVMYNKQHYNAPVHPLFNEE 204
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|1160555231|ref|XP_020436535.1| (hypothetical protein PPL_02453 [Polysphondylium pallidum PN500] >gi|281210254|gb|EFA84421.1| hypothetical protein PPL_02453 [Polysphondylium pallidum PN500]) HSP 1 Score: 175.252 bits (443), Expect = 5.444e-50 Identity = 82/208 (39.42%), Postives = 126/208 (60.58%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGFSRILSPHWSAPSHPAMGK 286
MVQ N + + +IG++I N SL++PH+ K + +DF+ L+Q G V+FDKDNT+T PY D ++E A + + VFG + + I+SNSAG+ DD A R+ES+LG+ VL+H KKP I +V EHF + + + +IGDR TDV++GN GMLT+ T+ +T +GDN + ++R E+ + ++ P H K
Sbjct: 1 MVQGFNFEAIKSIGKIIGNRSLLIPHLEFKDVRSIDFQRLKQMGFSAVLFDKDNTLTEPYADVIYEPFREAVDRCRGVFGEQSIAILSNSAGSSDDVDFREATRLESTLGLSVLKHGTKKPNGIEKVKEHFHTD-----NLQSIVMIGDRYSTDVVFGNLYGMLTIFTKPITSKGDNNIVKLIRDKESRYVDYCKNYYEPPKHSLFDK 203
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|1183507460|gb|ORZ30748.1| (mitochondrial PGP phosphatase-domain-containing protein [Catenaria anguillulae PL171]) HSP 1 Score: 172.17 bits (435), Expect = 4.709e-49 Identity = 91/189 (48.15%), Postives = 120/189 (63.49%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHT-QILTPEGDNKVAAIVRRLEN 266
MVQSLN G+ A+ VIRNPSL P SV I ++F+ L+Q+GIK ++FDKDN +TAPY D+ H V+ +F++ +FG + I SNSAGT DD A RIESSLGVPVL H KKP V++HF + T + +GDRLLTDV++ N G +VHT ++ T +GDN A +RR EN
Sbjct: 1 MVQSLNFAGIRALWWVIRNPSLARPCESVPDISHVNFDKLKQSGIKCLVFDKDNCLTAPYADQAHPTVSKSFQSCVELFGRDNVAIYSNSAGTPDDKDGVQAKRIESSLGVPVLYHTDKKPAGGESVVQHFSLKSP--TQPRQIAFLGDRLLTDVVFANRNGFYSVHTFRVFTEQGDNFFALWIRRFEN 187
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|219111027|ref|XP_002177265.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411800|gb|EEC51728.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 170.629 bits (431), Expect = 1.654e-48 Identity = 88/192 (45.83%), Postives = 122/192 (63.54%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTP----EGDNKVAAIVRRLEN 266
MVQS+N + +L + V+R P LM+P +SV + ++F L+ GI V+FDKDNT+T+PY +E+H A + + RVFG ++ I+SNSAGT DD + AIRIE+ LG+ V+RH KKPG + EVL HF T LC++GDRLLTD+++GN GMLTVH L DN A ++R +EN
Sbjct: 1 MVQSINTKALLTMASVLRRPGLMVPQLSVATVSQMNFTALKDHGIAAVMFDKDNTLTSPYENEIHPLAAQGIDEALRVFGRDRVAILSNSAGTKDDVDYTDAIRIENVLGIQVIRHEEKKPGGLDEVLAHFDL-----TDPATLCMVGDRLLTDIVFGNLHGMLTVHCLPLCSGSENSKDNWTAKLLRPMEN 187
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|661188997|emb|CDH48875.1| (haloacid dehalogenase superfamily protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 170.244 bits (430), Expect = 5.408e-48 Identity = 94/207 (45.41%), Postives = 129/207 (62.32%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELL-RQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHT-QILTPEGDNKVAAIVRRLENGFSRIL-SPHWSAPSHP 282
MVQSLN+ G++ +++ NPSL +PH+ V I + FE L RQ GI+ + FDKDN +TAPYV +H A+ K FGP K++I+SNSAGT DD HA A +++ +LGVPVLRH KKP + H + + +GDR+LTDV++GN G T+ T +I+T GDNK A I+RR E+G R+L S + PSHP
Sbjct: 1 MVQSLNVSGIVNAFRLLWNPSLAVPHLIVNDIRNIHFEQLKRQGGIQAMGFDKDNCLTAPYVPHIHPPFEKAWAVCKETFGPDKIVIVSNSAGTPDDKDHAEATKLQDALGVPVLRHEEKKPSGGAALARHLHP-----IPVDKIAFVGDRILTDVVFGNLNGNFTIWTRKIVTETGDNKAALILRRFEHGIIRLLQSLNVKPPSHP 202
BLAST of EWM27251.1 vs. NCBI_GenBank
Match: gi|330801077|ref|XP_003288557.1| (hypothetical protein DICPUDRAFT_152793 [Dictyostelium purpureum] >gi|325081407|gb|EGC34924.1| hypothetical protein DICPUDRAFT_152793 [Dictyostelium purpureum]) HSP 1 Score: 164.851 bits (416), Expect = 4.934e-46 Identity = 80/191 (41.88%), Postives = 113/191 (59.16%), Query Frame = 0
Query: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDS-GHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKECGPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGF 268
MVQS N + + + V RN SL++PH+ K I +DF+ L G KGV+FDKDNT+T PY D ++ + E K +FG + IISNSAG+ DD + A IE +LG+ VL+H KKP I V HFK T +L ++GDR LTD+++GN GM T++T +T +GDN ++R E +
Sbjct: 1 MVQSFNFEAIKCLKHVYRNKSLIVPHLEFKDIRGIDFKQLHDKGFKGVLFDKDNTLTEPYADTIYNPFKESIEKCKEIFGEENIAIISNSAGSSDDYPDYEKADHIEKNLGIKVLKHNTKKPDGIDSVTNHFK------TDPSNLVMVGDRYLTDILFGNLYGMFTIYTNPITSKGDNFFVKLIRDKERNY 185 The following BLAST results are available for this feature:
BLAST of EWM27251.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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