EWM30638.1, cds34 (CDS) Nannochloropsis gaditana

Overview
NameEWM30638.1
Unique Namecds34
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:104043..104196 -
Alignment locationCM002455.1:103688..103942 -
Alignment locationCM002455.1:103474..103622 -

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Properties
Property NameValue
Protein idEWM30638.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100568g1.696.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:104043..104196 -
CM002455.1supercontigCM002455.1:103688..103942 -
CM002455.1supercontigCM002455.1:103474..103622 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30638.1 vs. NCBI_GenBank
Match: gi|585113323|gb|EWM30638.1| (hypothetical protein Naga_100568g1 [Nannochloropsis gaditana])

HSP 1 Score: 381.719 bits (979), Expect = 3.665e-134
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 
Query:    1 MQMEWEVPRCGFHCHHDHKPQPKFVLSESHRRCSMAPSSLKPFGQNGVHIAGALTDDEIKELAPRFPAWLYLCCDTGSDTGAPNGGFPSVARGHDGGKHVHVPVDHTDLDMALTRRLLGAYTTLLPPTVRSPLLISCYGQRVSPRAGTRRSAGNWAQRGPLLFQQPRLDRLGSGLSILHFDGAGT 185
            MQMEWEVPRCGFHCHHDHKPQPKFVLSESHRRCSMAPSSLKPFGQNGVHIAGALTDDEIKELAPRFPAWLYLCCDTGSDTGAPNGGFPSVARGHDGGKHVHVPVDHTDLDMALTRRLLGAYTTLLPPTVRSPLLISCYGQRVSPRAGTRRSAGNWAQRGPLLFQQPRLDRLGSGLSILHFDGAGT
Sbjct:    1 MQMEWEVPRCGFHCHHDHKPQPKFVLSESHRRCSMAPSSLKPFGQNGVHIAGALTDDEIKELAPRFPAWLYLCCDTGSDTGAPNGGFPSVARGHDGGKHVHVPVDHTDLDMALTRRLLGAYTTLLPPTVRSPLLISCYGQRVSPRAGTRRSAGNWAQRGPLLFQQPRLDRLGSGLSILHFDGAGT 185
The following BLAST results are available for this feature:
BLAST of EWM30638.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113323|gb|EWM30638.1|3.665e-134100.00hypothetical protein Naga_100568g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna34rna34Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications