EWM27277.1, cds3399 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|585109459|gb|EWM27277.1| (histidine triad protein member [Nannochloropsis gaditana]) HSP 1 Score: 803.897 bits (2075), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
Query: 1 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRLQKAGAWAPV 396
MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRLQKAGAWAPV
Sbjct: 1 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRLQKAGAWAPV 396
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|585109460|gb|EWM27278.1| (histidine triad protein member [Nannochloropsis gaditana]) HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0 Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0
Query: 1 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGV 312
MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYG
Sbjct: 1 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGC 312
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|299470115|emb|CBN78144.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 261.922 bits (668), Expect = 5.147e-81 Identity = 150/381 (39.37%), Postives = 216/381 (56.69%), Query Frame = 0
Query: 16 ILLSVAALSWKRRRIGSKWSATNLI---HLRDFIMEEVLTDEVTPSPDGYTV-LLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIP-LTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRLQKAG 391
+ + VA W R G K + L LR F EEVL DE DG V LGRF WQ E A++K+ + L G+ N LS LS+R++ ESGAEY +Y+ S+S G+ +Y +EV+APAS R + R ++ E+ ++ GP D + G+G+SL W++N+L KEAER+++ED D GF+L D KW++HPD S P+ EW HPS L CLAI H R I +LRDLR +H+P+L+ + +G+ IEAVYGV ++++RVFVHY+PQFFHFHVHF+RL+ G+E ERAHLL D+I+ +ER +YE ++ + V++++ L+ + AG
Sbjct: 17 LAIGVAVACWAIARRGRKSGTSPLAGIRSLRGFEPEEVLKDE----DDGRVVTFLGRFAWQKEGEVALVKLIAKPLSL-------------SGLKDN--------------LSRLSVRLKSESGAEYAFYNCSMSLWHTFLRGLEGNSYSLEVVAPASERTVNRNRPVTTAMLTETAEMHASVTGPHMDRIVGDGKSLSWLFNVLSKDKEAERVLYEDE----DPEHGFLLNIDTKWRTHPDISTVPRHEWEGHPSVGELYCLAISHQRGIRTLRDLRAKHVPMLKEIYGRGVETIEAVYGVPEDQLRVFVHYMPQFFHFHVHFTRLHNTIGVEAERAHLLVDIIQNLERDSY---FYETRTMQFRVRENDALHTAFKNAG 359
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|922863927|gb|KOO31279.1| (scavenger mRNA-decapping enzyme [Chrysochromulina sp. CCMP291]) HSP 1 Score: 221.476 bits (563), Expect = 4.718e-66 Identity = 134/330 (40.61%), Postives = 183/330 (55.45%), Query Frame = 0
Query: 64 VLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYL-GIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPD--PSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRLQKA 390
V+LGRF+WQ + E A++K+ P+ L L +G L L + V SGAEY YY G S S+ G+ Y +EVIAPAS +QI R E+ LI E ALY + P + + + +++ WV N+L KKE ER++F D D +GF+L D KWKSHP + WR H S L CLAI H R + SLRDLR RHLPLL+ +L +G IEAVYGV +E+RVFVHY PQF+HFHVHF+RL+ G +VERAHLL +I ++E + Y ++ Y +K +++L ++ A
Sbjct: 3 VVLGRFSWQAKGETALVKLVPKPLS-----------------LASGL------------LGALDVNVSSYSGAEYCYYDGRCSLSSLCTTAGLRPAYSVEVIAPASEKQIARLRPERGTLITEDAALYASVVQPFIESM--DPKAIAWVANLLALKKETERLLFNDS----DPERGFLLNIDTKWKSHPPCVSDEFARVAWRCHASVQDLYCLAICHRRDLRSLRDLRARHLPLLRHILHEGCRVIEAVYGVPVDELRVFVHYQPQFYHFHVHFTRLHNDLGCQVERAHLLPQIIAELE---ADGDAYAKKTLWYQLKANDKLLEAIRAA 294
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|303275908|ref|XP_003057248.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226461600|gb|EEH58893.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 210.69 bits (535), Expect = 1.544e-61 Identity = 112/269 (41.64%), Postives = 159/269 (59.11%), Query Frame = 0
Query: 134 SGAEYGYYSGSLSP-------LSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGR---LQKAGA 392
SG EYGYY G ++ + + Y G E A + + R + V+ RE+P Y A P D + ++ WVY IL +KE ER++F+D D++ GF++ DPKW +HPDP TPKE+W +HP T L CL + H + + SLRDLR HLP+L+++ KG I+ YG+ E +R+FVHY PQF+HFHVHF+ +++ HG+ ERAHLL DVIE IER E+Y SI+ + +++EL+ R L KAGA
Sbjct: 77 SGMEYGYYHGVVASEFAPGLSVDVLYPGCLANESEEARAKLLAKHVSRNASQAPVVFRENPRAYAAAHLPYIDAI--PSSAIGWVYKILNKEKELERLLFDDD----DANDGFLVNTDPKWVTHPDPKATPKEQWMNHPGTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMARKGREVIKNTYGLADESLRIFVHYPPQFYHFHVHFTNVSVDHGVSAERAHLLDDVIENIER---DSEHYAKCSITCRMGENDELWRRFKELDKAGA 336
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|612388987|ref|XP_007510014.1| (predicted protein [Bathycoccus prasinos] >gi|412985683|emb|CCO19129.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 210.69 bits (535), Expect = 3.625e-61 Identity = 107/269 (39.78%), Postives = 160/269 (59.48%), Query Frame = 0
Query: 134 SGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPAS-------------PRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRLQK 389
SG EYGYY G ++ S + ++ ++V+ P + I R ++ V+ RE+P Y A P + + ++ WV+ IL +KE ER++F+D D + GF+L DPKW +HPDP TPKE+W +HPST L CL + H + + SLRDLR HLP+L+++ KG I+ YG+ E +R+FVHY PQF+HFHVHF+ +++ HG+ ERAHLL DVIE IER E+Y SI+ + +++EL+ R ++
Sbjct: 83 SGMEYGYYHGVVNNSSETFFAPYVS--VDVLYPGCLKDESKEAKAKLLAKHISRNQAQRPVIFRENPKTYENAHLPYIEAI--PSSAIGWVHKILNKEKELERLLFDDD----DVNDGFLLNTDPKWTTHPDPKTTPKEQWMNHPSTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMAKKGREVIKNTYGLANESLRIFVHYPPQFYHFHVHFTNVSVEHGVSAERAHLLDDVIENIER---DSEHYAKRSITCRMGENDELWRRFKE 340
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|255074721|ref|XP_002501035.1| (predicted protein [Micromonas commoda] >gi|226516298|gb|ACO62293.1| predicted protein [Micromonas commoda]) HSP 1 Score: 193.356 bits (490), Expect = 1.152e-54 Identity = 129/355 (36.34%), Postives = 180/355 (50.70%), Query Frame = 0
Query: 42 LRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTY-------HIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRLQK 389
LR ++ VL D G LLG F G +A++K+ +P D +L RA+S LS R SG EYGYY G+L PL L + + Y E + I R + V RE+ Y A P + EG ++ WVY IL +KE ER++F DP + GF+L DPKW +HPD + TPK W+ H ST L CL + H R + SLRDLRR HLP+L+++ G I YG+ VRVFVHY PQF+HFHVH++ + + G++ ERAHLL DVI+ IER E+Y +I+ + +++EL+ R ++
Sbjct: 17 LRGLKVDRVLNDG---KESGVVALLGTFA--GCSTQAVVKLSRPPIPVGDP------------------------DALSRAIS-LSERAPW-SGMEYGYYHGALDPLFAPGLSVDVLYPGCLYDESEEAREKLLKKHISRNTAQAPVAFRETVEAYENAHVPYIRAI-PEG-AVGWVYKILALEKETERLLFNDPTE----DAGFLLNTDPKWTTHPDHNTTPKAAWKGHASTRDLYCLGLCHRRDVKSLRDLRREHLPMLRAMAETGRRVIRDTYGLEDHSVRVFVHYPPQFYHFHVHYTNVAVDIGVQTERAHLLDDVIDNIER---DSEHYAKCAITGRMGENDELWRRYRE 331
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|1210514682|dbj|GAX26377.1| (m7GpppX diphosphatase [Fistulifera solaris]) HSP 1 Score: 187.963 bits (476), Expect = 1.516e-52 Identity = 108/284 (38.03%), Postives = 158/284 (55.63%), Query Frame = 0
Query: 121 RALSHLSLRVQLESGAEYGYYSGS---------LSPLSMAYLGI-------PLTYHIEVIAPASPRQIVRAHVE-KRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRL 387
+ L H + ESGAEY YY+ + L+ L+ +++GI PL E I PAS RQI RA LI E+P LYR P E++ G SL W+ N+L +KE ER + + ++ F++ D KW+SHPDP T +E W H + L CLAI+ D+++ SLRDLR HL +L+ LL IE YG+ + +R F HY PQF+ H+HF+R++ G +VER HL+ DVI+ +E P +YY +I+Y ++ ++ LY R+
Sbjct: 71 KLLQHYDFHLSSESGAEYSYYNATPRTGLWNSFLTTLT-SFVGITSSPDFGPL--QCEFIYPASDRQIQRASPSPSSRLIHETPELYRHVTEPYIQELKQSG-SLSWIDNVLSGEKEKERCLLD--------TQHFLVNVDTKWRSHPDPKTTSREVWYQHEAVDDLYCLAILKDKNVSSLRDLRGSHLAMLKELLDVCPKVIEKTYGISPDMIRCFFHYQPQFYQAHIHFTRIHNEIGAQVERGHLVHDVIQNLEMDP---DYYAKRTITYALRITDPLYHRI 339
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|1072226125|gb|OEU10869.1| (HIT-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 180.644 bits (457), Expect = 6.288e-51 Identity = 97/230 (42.17%), Postives = 140/230 (60.87%), Query Frame = 0
Query: 161 IEVIAPASPRQIVRAHVE-KRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRS----IGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYG 385
+E+I+PA+ RQI RA LI E+P +Y+ + P + G SL W+ N+++ KKE ER++ +D+S+ FV+ D KW+SHP P TP++E H S L CL IV I +LRDLR H+P+L++L +GLA IE +YG+ +++R FVHY PQF+HFHVHF+RL G VER HLL D+I+ +E P+ YY +I+Y +KK L+
Sbjct: 16 VELISPANERQISRAMPSFGSTLIHETPDIYQHVVYPYIKSIIDSG-SLDWINNVIDGKKETERLL-------IDTSQ-FVVSIDTKWRSHPSPLTTPRKECFGHSSVEDLYCLGIVKKEKDSSIIATLRDLRGEHIPMLKNLQKEGLAVIEKIYGIQSDQIRCFVHYQPQFYHFHVHFTRLENEIGAAVERGHLLIDIIQNLEMDPL---YYTRRTITYKLKKQSPLHN 233
BLAST of EWM27277.1 vs. NCBI_GenBank
Match: gi|1210516111|dbj|GAX24927.1| (m7GpppX diphosphatase [Fistulifera solaris]) HSP 1 Score: 183.341 bits (464), Expect = 7.761e-51 Identity = 104/283 (36.75%), Postives = 154/283 (54.42%), Query Frame = 0
Query: 121 RALSHLSLRVQLESGAEYGYYSGS-LSPLSMAYLGI--------------PLTYHIEVIAPASPRQIVRAHVE-KRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRL 387
+ L + ESGAEY YY+ + + L ++L I PL E I PAS RQI+RA I E+P LY P E++ G SL W+ N+L +KE ER + + ++ F+L D KW+SHPDP T +E W H + L CLAI+ D+SI SLRDLR HL +L+ L+ + I+ YG+ + +R F HY PQF+ H+HF+R++ G +VER HL+ DVI+ +E P +YY +++Y ++ ++ LY R+
Sbjct: 71 KLLKQYDFHLSSESGAEYSYYNATPRTGLWNSFLAILTSLVGNTSFFNFGPL--QCEFIYPASDRQILRASPSPSSRFIYETPELYHNVTEPYIQELKQSG-SLSWIDNVLSGEKEKERCLLD--------TEHFLLNVDTKWRSHPDPKTTSREVWYQHEAVDDLYCLAILKDKSIASLRDLRGSHLAMLKVLIQECPKVIKKTYGISSDMIRCFFHYQPQFYQTHIHFTRIHNEIGAQVERGHLVQDVIQNLEMDP---DYYAKRTVTYALRITDPLYHRI 339 The following BLAST results are available for this feature:
BLAST of EWM27277.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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