EWM27278.1, cds3398 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|585109460|gb|EWM27278.1| (histidine triad protein member [Nannochloropsis gaditana]) HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0 Query: 1 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGCISPG 316 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGCISPG Sbjct: 1 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGCISPG 316
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|585109459|gb|EWM27277.1| (histidine triad protein member [Nannochloropsis gaditana]) HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0 Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0 Query: 1 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGC 312 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYG Sbjct: 1 MPIAASQLSFFLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGV 312
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|299470115|emb|CBN78144.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 181.415 bits (459), Expect = 5.546e-51 Identity = 113/302 (37.42%), Postives = 158/302 (52.32%), Query Frame = 0 Query: 16 ILLSVAALSWKRRRIGSKWSATNLI---HLRDFIMEEVLTDEVTPSPDGYTV-LLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIP-LTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGC 312 + + VA W R G K + L LR F EEVL DE DG V LGRF WQ E A++K+ + L G+ N LS LS+R++ ESGAEY +Y+ S+S G+ +Y +EV+APAS R + R ++ E+ ++ GP D + G+G+SL W++N+L KEAER+++ED D GF+L D KW++HPD S P+ EW HPS L CLAI H R I +LRDLR +H+P+L+ + +G+ IEAVYG Sbjct: 17 LAIGVAVACWAIARRGRKSGTSPLAGIRSLRGFEPEEVLKDE----DDGRVVTFLGRFAWQKEGEVALVKLIAKPLSL-------------SGLKDN--------------LSRLSVRLKSESGAEYAFYNCSMSLWHTFLRGLEGNSYSLEVVAPASERTVNRNRPVTTAMLTETAEMHASVTGPHMDRIVGDGKSLSWLFNVLSKDKEAERVLYEDE----DPEHGFLLNIDTKWRTHPDISTVPRHEWEGHPSVGELYCLAISHQRGIRTLRDLRAKHVPMLKEIYGRGVETIEAVYGV 283
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|922863927|gb|KOO31279.1| (scavenger mRNA-decapping enzyme [Chrysochromulina sp. CCMP291]) HSP 1 Score: 155.221 bits (391), Expect = 1.604e-41 Identity = 100/251 (39.84%), Postives = 131/251 (52.19%), Query Frame = 0 Query: 64 VLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYL-GIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPD--PSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYG 311 V+LGRF+WQ + E A++K+ P+ L L +G L L + V SGAEY YY G S S+ G+ Y +EVIAPAS +QI R E+ LI E ALY + P + + + +++ WV N+L KKE ER++F D D +GF+L D KWKSHP + WR H S L CLAI H R + SLRDLR RHLPLL+ +L +G IEAVYG Sbjct: 3 VVLGRFSWQAKGETALVKLVPKPLS-----------------LASGL------------LGALDVNVSSYSGAEYCYYDGRCSLSSLCTTAGLRPAYSVEVIAPASEKQIARLRPERGTLITEDAALYASVVQPFIESM--DPKAIAWVANLLALKKETERLLFNDS----DPERGFLLNIDTKWKSHPPCVSDEFARVAWRCHASVQDLYCLAICHRRDLRSLRDLRARHLPLLRHILHEGCRVIEAVYG 218
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|551614506|ref|XP_005788173.1| (hypothetical protein EMIHUDRAFT_227266 [Emiliania huxleyi CCMP1516] >gi|485641601|gb|EOD35744.1| hypothetical protein EMIHUDRAFT_227266 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 134.035 bits (336), Expect = 2.833e-33 Identity = 98/279 (35.13%), Postives = 137/279 (49.10%), Query Frame = 0 Query: 11 FLVSSILLSVAALSWKRRRIGSKWSATNLIHLRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTP--KEEWRHHPSTSGLACLAIVHDRSIGSLRDL 287 F V+ + L++ RR G ++L L F EVL++ +G+ VLLG F+WQ E+A++K+ +AV R S +HL + SGAEY YY GS S S+ L + +EVIAPAS +QI R+ + V + E+ ALY A+ P D + + +S W+ L+ KEAER++F DP +P GF+L D KWKSHP + P + WR H + L CLAI H R I SLRDL Sbjct: 13 FTVAVVSLTLTIRHLLRRARG----VSSLRDLSSFKQSEVLSE-----GEGHAVLLGAFSWQPAGERALVKI---------SAVDRASSDVA---------------------AHLETSLSSYSGAEYAYYRGSASLASV--LWKRPAFALEVIAPASEKQIARSRPQPGVFVTETAALYHAAVAPYIDAL--DPKSTSWIDKCLDLSKEAERVLFNDPAEP----TGFLLNVDTKWKSHPPCTADPQLRASWRGHTAVKDLYCLAICHRRDIRSLRDL 244
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|612388987|ref|XP_007510014.1| (predicted protein [Bathycoccus prasinos] >gi|412985683|emb|CCO19129.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 131.724 bits (330), Expect = 4.094e-32 Identity = 70/191 (36.65%), Postives = 105/191 (54.97%), Query Frame = 0 Query: 134 SGAEYGYYSGSLSPLSMAYLGIPLTYHIEVIAPAS-------------PRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYG 311 SG EYGYY G ++ S + ++ ++V+ P + I R ++ V+ RE+P Y A P + + ++ WV+ IL +KE ER++F+D D + GF+L DPKW +HPDP TPKE+W +HPST L CL + H + + SLRDLR HLP+L+++ KG I+ YG Sbjct: 83 SGMEYGYYHGVVNNSSETFFAPYVS--VDVLYPGCLKDESKEAKAKLLAKHISRNQAQRPVIFRENPKTYENAHLPYIEAI--PSSAIGWVHKILNKEKELERLLFDDD----DVNDGFLLNTDPKWTTHPDPKTTPKEQWMNHPSTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMAKKGREVIKNTYG 265
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|303275908|ref|XP_003057248.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226461600|gb|EEH58893.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 128.642 bits (322), Expect = 4.723e-31 Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 0 Query: 134 SGAEYGYYSGSLSP-------LSMAYLGIPLTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYG 311 SG EYGYY G ++ + + Y G E A + + R + V+ RE+P Y A P D + ++ WVY IL +KE ER++F+D D++ GF++ DPKW +HPDP TPKE+W +HP T L CL + H + + SLRDLR HLP+L+++ KG I+ YG Sbjct: 77 SGMEYGYYHGVVASEFAPGLSVDVLYPGCLANESEEARAKLLAKHVSRNASQAPVVFRENPRAYAAAHLPYIDAI--PSSAIGWVYKILNKEKELERLLFDDD----DANDGFLVNTDPKWVTHPDPKATPKEQWMNHPGTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMARKGREVIKNTYG 255
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|1210514682|dbj|GAX26377.1| (m7GpppX diphosphatase [Fistulifera solaris]) HSP 1 Score: 125.176 bits (313), Expect = 1.134e-29 Identity = 82/212 (38.68%), Postives = 112/212 (52.83%), Query Frame = 0 Query: 121 RALSHLSLRVQLESGAEYGYYSGS---------LSPLSMAYLGI-------PLTYHIEVIAPASPRQIVRAHVE-KRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGCISP 315 + L H + ESGAEY YY+ + L+ L+ +++GI PL E I PAS RQI RA LI E+P LYR P E++ G SL W+ N+L +KE ER + + ++ F++ D KW+SHPDP T +E W H + L CLAI+ D+++ SLRDLR HL +L+ LL IE YG ISP Sbjct: 71 KLLQHYDFHLSSESGAEYSYYNATPRTGLWNSFLTTLT-SFVGITSSPDFGPL--QCEFIYPASDRQIQRASPSPSSRLIHETPELYRHVTEPYIQELKQSG-SLSWIDNVLSGEKEKERCLLD--------TQHFLVNVDTKWRSHPDPKTTSREVWYQHEAVDDLYCLAILKDKNVSSLRDLRGSHLAMLKELLDVCPKVIEKTYG-ISP 269
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|255074721|ref|XP_002501035.1| (predicted protein [Micromonas commoda] >gi|226516298|gb|ACO62293.1| predicted protein [Micromonas commoda]) HSP 1 Score: 123.25 bits (308), Expect = 5.636e-29 Identity = 95/277 (34.30%), Postives = 127/277 (45.85%), Query Frame = 0 Query: 42 LRDFIMEEVLTDEVTPSPDGYTVLLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLTY-------HIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYG 311 LR ++ VL D G LLG F G +A++K+ +P D +L RA+S LS R SG EYGYY G+L PL L + + Y E + I R + V RE+ Y A P + EG ++ WVY IL +KE ER++F DP + GF+L DPKW +HPD + TPK W+ H ST L CL + H R + SLRDLRR HLP+L+++ G I YG Sbjct: 17 LRGLKVDRVLND---GKESGVVALLGTFA--GCSTQAVVKLSRPPIPVGDP------------------------DALSRAIS-LSERAPW-SGMEYGYYHGALDPLFAPGLSVDVLYPGCLYDESEEAREKLLKKHISRNTAQAPVAFRETVEAYENAHVPYIRAI-PEG-AVGWVYKILALEKETERLLFNDPTE----DAGFLLNTDPKWTTHPDHNTTPKAAWKGHASTRDLYCLGLCHRRDVKSLRDLRREHLPMLRAMAETGRRVIRDTYG 256
BLAST of EWM27278.1 vs. NCBI_GenBank
Match: gi|1210516111|dbj|GAX24927.1| (m7GpppX diphosphatase [Fistulifera solaris]) HSP 1 Score: 119.013 bits (297), Expect = 2.430e-27 Identity = 76/207 (36.71%), Postives = 105/207 (50.72%), Query Frame = 0 Query: 121 RALSHLSLRVQLESGAEYGYYSGS-LSPLSMAYLGI--------------PLTYHIEVIAPASPRQIVRAHVE-KRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYG 311 + L + ESGAEY YY+ + + L ++L I PL E I PAS RQI+RA I E+P LY P E++ G SL W+ N+L +KE ER + + ++ F+L D KW+SHPDP T +E W H + L CLAI+ D+SI SLRDLR HL +L+ L+ + I+ YG Sbjct: 71 KLLKQYDFHLSSESGAEYSYYNATPRTGLWNSFLAILTSLVGNTSFFNFGPL--QCEFIYPASDRQILRASPSPSSRFIYETPELYHNVTEPYIQELKQSG-SLSWIDNVLSGEKEKERCLLD--------TEHFLLNVDTKWRSHPDPKTTSREVWYQHEAVDDLYCLAILKDKSIASLRDLRGSHLAMLKVLIQECPKVIKKTYG 266 The following BLAST results are available for this feature:
BLAST of EWM27278.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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