EWM27288.1, cds3395 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27288.1 vs. NCBI_GenBank
Match: gi|585109470|gb|EWM27288.1| (hypothetical protein Naga_100080g23 [Nannochloropsis gaditana]) HSP 1 Score: 1101.66 bits (2848), Expect = 0.000e+0 Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0
Query: 1 MVPQVSSSFPSSIDPNDLQAFASPHSSTPLSGHSISSPPSNEWWTWPWFNANLNLFLTFSEKAIILLREALSASWLALHAWYRLGVLLGRPVLRLLLHLWRSALPYLQWFAKAFINHLKEQEPEVLLGYGLFLGAVVGFFLLRRLLRRLRVWDRCRATIASKVALVECRYHQARNKLNQYSRRAAEAFPHVLFVVACLAVQWLFPAVTSLLSQKLVFNALLLYLPAFASFHALESFPPRKASFPGSTGTRHAKPADLPSTSRASSTAARLAPTGAPSHSHGDDKHEKRLKECLSYWIVAASIVAAGQGLDQLWLRWTTKWVPWGHECFLYFLLWLHLPQGGGALLKHHLLPFLRRHLGGILALQSRRDALVRRLLSLAVFAHLLSHPTADNLALHVDEFFLVLPAAVLTFSPFAGWGLLFISLLFPVLASARALGEEGGKRPVGSKGTKKETGGRSQSPPTYSPRPWLQYWIVYALGHVIFQVLPIWPLVQMWVFLWVLLPDLAGIPFLPIKLDGRRQVYGLLSRLHRLEMAGAGGKFQGQEQANPPGAEDGE 553
MVPQVSSSFPSSIDPNDLQAFASPHSSTPLSGHSISSPPSNEWWTWPWFNANLNLFLTFSEKAIILLREALSASWLALHAWYRLGVLLGRPVLRLLLHLWRSALPYLQWFAKAFINHLKEQEPEVLLGYGLFLGAVVGFFLLRRLLRRLRVWDRCRATIASKVALVECRYHQARNKLNQYSRRAAEAFPHVLFVVACLAVQWLFPAVTSLLSQKLVFNALLLYLPAFASFHALESFPPRKASFPGSTGTRHAKPADLPSTSRASSTAARLAPTGAPSHSHGDDKHEKRLKECLSYWIVAASIVAAGQGLDQLWLRWTTKWVPWGHECFLYFLLWLHLPQGGGALLKHHLLPFLRRHLGGILALQSRRDALVRRLLSLAVFAHLLSHPTADNLALHVDEFFLVLPAAVLTFSPFAGWGLLFISLLFPVLASARALGEEGGKRPVGSKGTKKETGGRSQSPPTYSPRPWLQYWIVYALGHVIFQVLPIWPLVQMWVFLWVLLPDLAGIPFLPIKLDGRRQVYGLLSRLHRLEMAGAGGKFQGQEQANPPGAEDGE
Sbjct: 1 MVPQVSSSFPSSIDPNDLQAFASPHSSTPLSGHSISSPPSNEWWTWPWFNANLNLFLTFSEKAIILLREALSASWLALHAWYRLGVLLGRPVLRLLLHLWRSALPYLQWFAKAFINHLKEQEPEVLLGYGLFLGAVVGFFLLRRLLRRLRVWDRCRATIASKVALVECRYHQARNKLNQYSRRAAEAFPHVLFVVACLAVQWLFPAVTSLLSQKLVFNALLLYLPAFASFHALESFPPRKASFPGSTGTRHAKPADLPSTSRASSTAARLAPTGAPSHSHGDDKHEKRLKECLSYWIVAASIVAAGQGLDQLWLRWTTKWVPWGHECFLYFLLWLHLPQGGGALLKHHLLPFLRRHLGGILALQSRRDALVRRLLSLAVFAHLLSHPTADNLALHVDEFFLVLPAAVLTFSPFAGWGLLFISLLFPVLASARALGEEGGKRPVGSKGTKKETGGRSQSPPTYSPRPWLQYWIVYALGHVIFQVLPIWPLVQMWVFLWVLLPDLAGIPFLPIKLDGRRQVYGLLSRLHRLEMAGAGGKFQGQEQANPPGAEDGE 553
BLAST of EWM27288.1 vs. NCBI_GenBank
Match: gi|299470787|emb|CBN79833.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 84.3445 bits (207), Expect = 1.514e-13 Identity = 99/436 (22.71%), Postives = 165/436 (37.84%), Query Frame = 0
Query: 64 IILLREALSASWLALHAWYRLGVLLGRPVLRLLLHLWRSALPYLQWFAKAFINHLKEQEPEVLLGYGLFLGAVVGFFLLRRLLRRLRVWDRCRATIASKVALVECRYHQARNKLNQYSRRAAEAFPHVLFVVACLAVQWLFPAVTSLLSQKLVFNALLLYLPAFASFHALESFPPRKASFPGSTG--TRHAKPADLPSTSRASSTAARLAP----------------TGAPSHS---HGDDKHEKRLKECLSYWIVAASIVAAGQGLDQLWLRWTTKWVPWGHECFLYFLLWLHLPQGGGALLKHH--LLPFLRRHLGGILALQSRRDALVRRLLSLAVFAHLLSHPTADNLALHVDEFFLVLPAAVLTFSP--FAGWGLLFISLLFPVLASARALGEEGGKRPVGSKGTKKETGGRSQSPPTYSPRPWLQYWIVY 474
++ + A SW +L AW+ + L PVL+ L L R+ P+ Q A + L + + LLRR + R R R R + + A + Y + + R +A AFPHV++ A + WL P +T L K A + +A + L + S G + + PA + A+ AP G P+ S G + + L YW+V VA GL ++ T + P+ + LW+HLP G L + L P + ++ + Q+ ++R+ L V LL+ A+ L ++ + ++++PA +P L+ L+ P S + LG V + T S + WL YW+ Y
Sbjct: 41 VLAFQAAFETSWHSLSAWFSVLTLFLSPVLQFLAVLARAVWPHAQTAAITVCKYQASLPASTLCAEAAAVVLFIALVLLRRFIVRQRYIPRARRRVRNFRARINTAYMSFTASVERNLRLSARAFPHVVYWTAAASFAWLAPDLTGSLRDKFWVFATATWPTLYAVYLVLLVRSQNAVNDEDSAGGSSVNGTPAGAGTRGTAAKAPVLYAPGARTPREGKPRAGTPGAGTPARSGLARGAGVMPQDVDRVLMYWVVFT--VARCWGLLAAYVP-ETFFTPYVRTVAFFLALWMHLPGPGSGLQVVYAWLEPLVHTYVKDLRMPQNGYTGTLKRVQDLLVLVRLLTEEKAELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTLGRRSNTSAVSTAWAALATSADS------ARVRWLTYWVAY 467 The following BLAST results are available for this feature:
BLAST of EWM27288.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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