EWM27291.1, cds3393 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|585109473|gb|EWM27291.1| (polyphosphoinositide binding protein ssh2 [Nannochloropsis gaditana]) HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
Query: 1 MGGREGGREERREGGSRSRTGKMSLCSARKWHFERTGLLKVAYLPPSPLALSLPPSYLPPSSPPSALIHMPGIPERGLAVRMAVDRECVARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEEKILLERVDPQELDRKYGGAKDFTFEAHDYFGVSKEEVRRLTK 308
MGGREGGREERREGGSRSRTGKMSLCSARKWHFERTGLLKVAYLPPSPLALSLPPSYLPPSSPPSALIHMPGIPERGLAVRMAVDRECVARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEEKILLERVDPQELDRKYGGAKDFTFEAHDYFGVSKEEVRRLTK
Sbjct: 1 MGGREGGREERREGGSRSRTGKMSLCSARKWHFERTGLLKVAYLPPSPLALSLPPSYLPPSSPPSALIHMPGIPERGLAVRMAVDRECVARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEEKILLERVDPQELDRKYGGAKDFTFEAHDYFGVSKEEVRRLTK 308
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|298708308|emb|CBJ48371.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 130.954 bits (328), Expect = 2.724e-33 Identity = 68/209 (32.54%), Postives = 105/209 (50.24%), Query Frame = 0
Query: 89 VARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEEKILLERVDPQELDRKY-GGAKDFTFEAHDYF 296
+ RY W G+ D V T++WRE L V +A+ G +YV G DR RP+I++ P + + EK + L +TLERA S G ++ + DCSGF S PP+ ++K F + HYP R+G++ ++ G F+WK+++ ++ T+ KI F+ E E L +DP L GG DFT+ +Y
Sbjct: 1 MMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLLTDNQVAEEAKYGKMYVRGLDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKG-SLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNEEYL 208
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|290971277|ref|XP_002668443.1| (predicted protein [Naegleria gruberi] >gi|284081854|gb|EFC35699.1| predicted protein, partial [Naegleria gruberi]) HSP 1 Score: 131.339 bits (329), Expect = 7.853e-33 Identity = 65/185 (35.14%), Postives = 110/185 (59.46%), Query Frame = 0
Query: 115 IQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEE--KILLERVDPQELDRKYGGAKDFTFEAHDYFG 297
++WR + + +++ ++ G L+ G D+ RP+IY PA + + EK I+ LVYT+ERA+D + +GVE ++IID +G++ N PP ++ KQT ++L+ YP R+G + T F W+ ++P ++P+T+NKI FV E E KI + +D ++D +GG F FE D++G
Sbjct: 84 LEWRRTFKPDEITAKELEDESSSGKLFQRGFDKNNRPIIYMFPARENSTDYEKNIKLLVYTMERAVD-AMPEGVEQMTWIIDFNGYTTRNAPPFSVAKQTLSILNECYPERLGACFMVDTPFIFNIFWRAISPFINPVTKNKIHFVNGKESEKAKIFGKHIDLAQIDTTWGGTSTFVFEHSDFWG 267
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|290999381|ref|XP_002682258.1| (hypothetical protein NAEGRDRAFT_78034 [Naegleria gruberi] >gi|284095885|gb|EFC49514.1| hypothetical protein NAEGRDRAFT_78034 [Naegleria gruberi]) HSP 1 Score: 132.109 bits (331), Expect = 9.481e-33 Identity = 68/198 (34.34%), Postives = 116/198 (58.59%), Query Frame = 0
Query: 115 IQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEE--KILLERVDPQELDRKYGGAKDFTFEAHDYFG----VSKEEVRRL 306
++WR + + +++ ++ G L+ G D+ RP+IY PA + + EK I+ LVYT+ERA+D + +GVE ++IID +G++ N PP ++ KQT ++L+ YP R+G + T F W+ ++P ++P+T+NKI FV E E KI + +D ++D +GG F FE D++G + K ++RL
Sbjct: 84 LEWRRTFKPDEITAKELEDESSSGKLFQRGFDKNNRPIIYMFPARENSTDYEKNIKLLVYTMERAVD-AMPEGVEQMTWIIDFNGYTTRNAPPFSVAKQTLSILNECYPERLGACFMVDTPFIFNIFWRAISPFINPVTKNKIHFVNGKESEKAKIFGKHIDLAQIDTTWGGTSTFVFEHSDFWGNVMELDKHRLKRL 280
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|299473160|emb|CBN78736.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 133.265 bits (334), Expect = 2.905e-32 Identity = 71/229 (31.00%), Postives = 113/229 (49.34%), Query Frame = 0
Query: 71 PGIPERGLAVRMAVDRECVARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPT---GEEEKILLERVDPQELDRKYGGAKDFTFEAHDYF 296
PG+ R V +D R+ A W GK D + +I WRE+ L EDV+ Q G + V G D RP++YF PA + + ++Y LERA+ L ++ + Y+ +IDC G L +PP+ +K+ F LL HHYP R+G + F + G + WK+++PL+ T+ K+ +P+ G+ K + P +L GG + ++ YF
Sbjct: 187 PGLERRAKKVHHELDTVAFGRFLEAAFWALEHDGKRVSDFIEESIAWREKIGADRLRKEDVVDQGCRGAIIVKGHDLSRRPVVYFRPALDGRMEGDGNSKLMIYNLERAIRLMPRNSWQ-YTIVIDCEGMGLKQLPPVTYMKKMFKLLSHHYPMRLGHVLFTNVGPSVMLCWKVVSPLLQARTKAKMHLIPSTALGQTAKY----IHPSQLLSFAGGKSTWQYDPAVYF 410
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|831757515|ref|XP_012749054.1| (hypothetical protein SAMD00019534_112710 [Acytostelium subglobosum LB1] >gi|735849883|dbj|GAM28095.1| hypothetical protein SAMD00019534_112710 [Acytostelium subglobosum LB1]) HSP 1 Score: 127.487 bits (319), Expect = 6.888e-31 Identity = 68/212 (32.08%), Postives = 116/212 (54.72%), Query Frame = 0
Query: 88 CVARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALD-LSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEE--EKILLERVDPQELDRKYGGAKDFTFEAHDYF 296
C RY A + + + + + +T+ WR + + E + +A G YVNG + G+P+IY P+ + + ++ IQ +VYTLERA++ + +GVE + +ID SG+S+ NMPP ++ KQ +L HYP R+G+ + F W ++P ++ T KI F+ GE+ IL + D Q L+++YGG +F+F +Y+
Sbjct: 83 CCLRYLRARDYDLT----QSFNMLKKTLAWRRDYKPWEITAEHLSFEAATGKQYVNGKIKDGKPVIYMRPSRENTKTHDRQIQLMVYTLERAIEQMDAANGVEQVALMIDFSGYSMFNMPPTSVSKQCLDILSDHYPERLGYAFIIDPPYIFNIFWNFVSPFINKHTSKKIHFL-KGEKLRRNILSQHFDEQVLEKEYGGVSEFSFVREEYW 289
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|1160566429|ref|XP_020428424.1| (cellular retinaldehyde-binding/triple function domain-containing protein [Polysphondylium pallidum PN500] >gi|281202087|gb|EFA76292.1| cellular retinaldehyde-binding/triple function domain-containing protein [Polysphondylium pallidum PN500]) HSP 1 Score: 122.094 bits (305), Expect = 5.854e-29 Identity = 69/216 (31.94%), Postives = 119/216 (55.09%), Query Frame = 0
Query: 81 RMAVDRECVARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERAL---DLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEEKI--LLERVDPQELDRKYGGAKDFTFE 291
++ VD + RY A ++ + + + + +T++WR++ + + E + +A G Y NG + G+P IY P + + E+ IQ LVYTLERA+ D S + GVE + +ID +G+SL N PP+++ +QT +L HYP R+G + F L+ + P V+P T KI+FV GE+ K+ + E D + ++R + G +F ++
Sbjct: 66 KLWVDDMMILRYLRAREYD----LQASFNLLKKTLEWRKQYKPDEITAEHLSYEASTGKQYCNGKTKDGKPAIYMRPVRENTKNYERQIQLLVYTLERAIQHIDRSTETGVEQLAIVIDFNGYSLFNAPPMSVARQTLEILSDHYPERLGTAFVVDPPMIFNILYNAIMPFVNPNTAKKIVFV-KGEKAKLKTMHEHFDIEHIERPHTGTSEFEYD 276
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|470325800|ref|XP_004364555.1| (hypothetical protein CAOG_01687 [Capsaspora owczarzaki ATCC 30864] >gi|765549744|gb|KJE90365.1| hypothetical protein CAOG_001687 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 122.865 bits (307), Expect = 5.933e-29 Identity = 68/224 (30.36%), Postives = 116/224 (51.79%), Query Frame = 0
Query: 88 CVARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPED--VLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERAL-DLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEEKI--LLERVDPQELDRKYGGAKDFTFEAHDYFGVSKEEVRRL 306
C+ARY A W + +L T+ WRE +V + PED ++ + G Y +G DR GRP+IY P FQ + + ++Y V+ LE+A+ ++ +GVE + +ID G+S+ N PP++ K+ ++L + YP R+G + F +K++ P + TR KI F+ ++ K L + +D + L+ YGG +++ Y EE+ R
Sbjct: 102 CLARYLRARDWDVEKAHQL----MLGTLTWREEFKVHEISPEDPLIVEEGLTGKTYRHGRDRAGRPIIYMKPRFQNTKNYAEQVRYTVHHLEQAMRSMNLHEGVEQMTLLIDFQGYSVMNAPPMSQTKEVMSILLNCYPERLGLALMVDAPFLFNMAYKVVYPFLPTETRKKIHFISGNQQSKATSLSQHIDLETLEHDYGGLVKAKYDSAAYTKAEAEELGRF 321
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|545704891|ref|XP_005704767.1| (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Galdieria sulphuraria] >gi|452821214|gb|EME28247.1| SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 119.398 bits (298), Expect = 3.175e-28 Identity = 70/223 (31.39%), Postives = 110/223 (49.33%), Query Frame = 0
Query: 84 VDRECVARYFVAGQWKPSLRGKTTVDHVLRTIQWR---ERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEEK------ILLERVDPQELDRKYGGAKDFTFEAHDYFG 297
D C+ RY A + + ++ V RT++WR E E + + P V + LYV G D+ GRP+IY P +Q + +Q+LVYTLE+A+ Q+GVE ID G+S+ N P I ++++T T+L +YP R+G L+ + F +K++ P + T KI F +K + D EL+ YGG D ++ +YF
Sbjct: 52 CDDACLLRYLRAR----NNQVDKALELVRRTLEWRKNFEVEELMNKVPPQVKEEGSSQKLYVGGKDKYGRPIIYMKPKYQNTKESIHQLQHLVYTLEKAIR-RMQNGVEKLILFIDFEGYSMRNTPSIKMMRETLTVLQDYYPERLGLAICLNAPTLFYTFYKIIKPFIDKNTVQKIYFFKVNNTKKSKEWMEFAQQVFDLDELEVDYGGRNDKEYDPEEYFS 269
BLAST of EWM27291.1 vs. NCBI_GenBank
Match: gi|1160558425|ref|XP_020434034.1| (hypothetical protein PPL_05149 [Polysphondylium pallidum PN500] >gi|281207737|gb|EFA81917.1| hypothetical protein PPL_05149 [Polysphondylium pallidum PN500]) HSP 1 Score: 119.013 bits (297), Expect = 3.436e-28 Identity = 63/186 (33.87%), Postives = 103/186 (55.38%), Query Frame = 0
Query: 108 VDHVLRTIQWRERERVAHLGPEDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALD-LSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFITFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPTGEEEKILLE-RVDPQELDRKYGGAKDFTFE 291
+D +TI WR + + E + + G YVNG + P+IY P+ + + E+ IQ +VYTLERA++ + + GVE + +ID SG+S+ NMPP ++ KQ +L +HYP R+GF + F W ++P ++ T +KI+FV ++ + LL + L+ +YGG DF F+
Sbjct: 48 LDEREKTIAWRREYKPHEITAEHLSFENSTGKQYVNGKTKENLPVIYQRPSRENTKTYERQIQLMVYTLERAIEHMDEKRGVEQVALMIDFSGYSMFNMPPTSVSKQCLDILLNHYPERLGFAFIIDPPMIFNVFWSFVSPFINKNTASKIVFVKGEKQRRNLLHTHFEDNVLEAEYGGKGDFVFQ 233 The following BLAST results are available for this feature:
BLAST of EWM27291.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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