EWM27286.1, cds3388 (CDS) Nannochloropsis gaditana

Overview
NameEWM27286.1
Unique Namecds3388
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:310327..310470 +
Alignment locationCM002461.1:310639..312489 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27286.1
Productabc transporter atp-binding protein
Orig transcript idgnl|cribi|Naga_100080g16.2850.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:310327..310470 +
CM002461.1supercontigCM002461.1:310639..312489 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR003439ABC_transporter-like
IPR022374ABC_ATP-bd_ChvD
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|585109468|gb|EWM27286.1| (abc transporter atp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 1356.66 bits (3510), Expect = 0.000e+0
Identity = 664/664 (100.00%), Postives = 664/664 (100.00%), Query Frame = 0
Query:    1 MRCSWALVLGLMVLDATAFFIGTAPNFQFSTWPSTWKQDVGSHPLSAKGIKTRLNPLRMGPLNAANLKKKQKGGKKASKGGGGKGKGGGGGGGNSVIDTNKREYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELEGPTVGDELEKAVAETRGLLKEYETVSASLGKPDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGVEPKRPKFRPLPTV 664
            MRCSWALVLGLMVLDATAFFIGTAPNFQFSTWPSTWKQDVGSHPLSAKGIKTRLNPLRMGPLNAANLKKKQKGGKKASKGGGGKGKGGGGGGGNSVIDTNKREYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELEGPTVGDELEKAVAETRGLLKEYETVSASLGKPDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGVEPKRPKFRPLPTV
Sbjct:    1 MRCSWALVLGLMVLDATAFFIGTAPNFQFSTWPSTWKQDVGSHPLSAKGIKTRLNPLRMGPLNAANLKKKQKGGKKASKGGGGKGKGGGGGGGNSVIDTNKREYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELEGPTVGDELEKAVAETRGLLKEYETVSASLGKPDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGVEPKRPKFRPLPTV 664          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|298714250|emb|CBJ27386.1| (ABC transporter ATP-binding protein [Ectocarpus siliculosus])

HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0
Identity = 392/570 (68.77%), Postives = 466/570 (81.75%), Query Frame = 0
Query:   96 VIDTNKREYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELE-GPTVGDELEKAVAETRGLLKEYETVSASLGKPDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGVEPKRPKFRPLPTV 664
             +DT++++++YQM+R+SK+FGKG   +PVLKD+SLSFYPG KIGVLG NG+GKSTL+KIMAGVD +F GE+R + WAK+GYL QEP+L+ G TV   +E AV  TR LLKEYE VSA +        + + L+  MD LQ+ IEA NGWELDR+LERAMDALRCP  +A+V NLSGGERRRVALC+LLL RPDLLLLDEPTNHLDAESVAW+EDFL  + GTVVAITHDRYFLDNVA +ILELDRGEG PF+GNYSG+LE+K  RLE +A+ DNKR  ++ +ELEW+R +PKARQ K+KAR+  Y+ + QADE A   +R+   +I+IPPG PL   VVEAE+LGK  G RLL+D V+F LPRGGVVG+IGANGVGKSTL  +IAGL+ PD G L +G+TV VMYVDQNRE + DP  +V+D V DGA++I LG R +NSRAYL WFNFKG DQQK V +LSGGERNRL LA+TLKQGGNLLLLDEPTNDLDVDTLRALEDAI+AY GCAVI+SHDRYFLD+VATH LAFEDDG VVWFEG F+EY++DL+ R GG EPKRPKFRPLP V
Sbjct:  117 TVDTSRKDFVYQMNRLSKSFGKGTSIRPVLKDVSLSFYPGAKIGVLGSNGSGKSTLMKIMAGVDTEFQGESRLSDWAKVGYLEQEPKLDDGDTVSSNIEAAVVPTRTLLKEYEQVSAEMSS---EGADMDKLSKEMDRLQNAIEAANGWELDRVLERAMDALRCPDGDALVDNLSGGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLELDAKIDNKRKASIKKELEWVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFCLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINSRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQGGNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYEQDLRRRAGGNEPKRPKFRPLPAV 683          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|1176536018|ref|WP_082363010.1| (energy-dependent translational throttle protein EttA [Chondromyces crocatus])

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 339/568 (59.68%), Postives = 441/568 (77.64%), Query Frame = 0
Query:  103 EYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELE-GPTVGDELEKAVAETRGLLKEYETVSASLGK--PDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGP--TNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGV--EPKRPKFRPLPT 663
            ++I+ M  + K       +K VLK + LSFYPG KIGVLGGNGAGKSTL++IMAGVD D+ GEA+ A   ++G+L QEP+LE G TV + ++ AV+ TRGLL  +E + A LG+  PD+     E L      LQ +I+A+N WE+DR++ERAMDAL+ PP EA+V +LSGGERRRVALCRLLL +PD+LLLDEPTNHLDAESVAWLE FL DY+GTVVA+THDRYFLDNVAGWILELDRG+GIP+EGNYSGWLE+K KRLE E ++D+ R + L RELEW+RM+P+ARQ K+KAR+ +YE ++  D++A +    GP  T I+IP GP L   V+EA++L K +GDRLL D ++F+LPRGG+VG+IG NG GK+TLF++I GLE PD G L +G+TV++ YVDQ+R+A+   T  V+  ++ G E+I +GKR V SRAY+  FNF G+DQQK VG LSGGERNR+ LA+ L++GGN+LLLDEPTNDLDVDTLRALE+A+  +AGCAV+ISHDR+FLDR+ATHILAFE D  VVWF+G++ +Y+ DL+ R G    EP++ ++R L +
Sbjct:   29 QFIFTMQDVRKVHPP---NKEVLKGLWLSFYPGAKIGVLGGNGAGKSTLLRIMAGVDKDYLGEAKAAEGTRIGFLQQEPQLEAGKTVRESVDAAVSATRGLLTRFEEIGAKLGEDPPDM-----EALLEEYAVLQDKIDASNAWEIDRVIERAMDALKLPPPEALVDHLSGGERRRVALCRLLLEKPDILLLDEPTNHLDAESVAWLERFLGDYEGTVVAVTHDRYFLDNVAGWILELDRGQGIPYEGNYSGWLEQKKKRLESEQKQDSARKRTLERELEWVRMAPRARQAKSKARLAAYESLLAEDQKASK----GPEITEIHIPAGPRLGNNVIEAKSLRKAFGDRLLIDDLNFALPRGGIVGIIGPNGAGKTTLFRMIMGLEQPDAGELLIGETVQLAYVDQSRDAL-KATNNVWQEISGGEEKILVGKREVPSRAYVSSFNFAGSDQQKKVGDLSGGERNRVHLAKLLQRGGNVLLLDEPTNDLDVDTLRALEEALLNFAGCAVVISHDRWFLDRIATHILAFEGDAKVVWFQGNYQDYEADLKRRLGAKADEPRKFRYRKLTS 583          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|908359957|gb|AKT42532.1| (ABC transporter ATP-binding protein [Chondromyces crocatus])

HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 339/568 (59.68%), Postives = 441/568 (77.64%), Query Frame = 0
Query:  103 EYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELE-GPTVGDELEKAVAETRGLLKEYETVSASLGK--PDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGP--TNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGV--EPKRPKFRPLPT 663
            ++I+ M  + K       +K VLK + LSFYPG KIGVLGGNGAGKSTL++IMAGVD D+ GEA+ A   ++G+L QEP+LE G TV + ++ AV+ TRGLL  +E + A LG+  PD+     E L      LQ +I+A+N WE+DR++ERAMDAL+ PP EA+V +LSGGERRRVALCRLLL +PD+LLLDEPTNHLDAESVAWLE FL DY+GTVVA+THDRYFLDNVAGWILELDRG+GIP+EGNYSGWLE+K KRLE E ++D+ R + L RELEW+RM+P+ARQ K+KAR+ +YE ++  D++A +    GP  T I+IP GP L   V+EA++L K +GDRLL D ++F+LPRGG+VG+IG NG GK+TLF++I GLE PD G L +G+TV++ YVDQ+R+A+   T  V+  ++ G E+I +GKR V SRAY+  FNF G+DQQK VG LSGGERNR+ LA+ L++GGN+LLLDEPTNDLDVDTLRALE+A+  +AGCAV+ISHDR+FLDR+ATHILAFE D  VVWF+G++ +Y+ DL+ R G    EP++ ++R L +
Sbjct:    4 QFIFTMQDVRKVHPP---NKEVLKGLWLSFYPGAKIGVLGGNGAGKSTLLRIMAGVDKDYLGEAKAAEGTRIGFLQQEPQLEAGKTVRESVDAAVSATRGLLTRFEEIGAKLGEDPPDM-----EALLEEYAVLQDKIDASNAWEIDRVIERAMDALKLPPPEALVDHLSGGERRRVALCRLLLEKPDILLLDEPTNHLDAESVAWLERFLGDYEGTVVAVTHDRYFLDNVAGWILELDRGQGIPYEGNYSGWLEQKKKRLESEQKQDSARKRTLERELEWVRMAPRARQAKSKARLAAYESLLAEDQKASK----GPEITEIHIPAGPRLGNNVIEAKSLRKAFGDRLLIDDLNFALPRGGIVGIIGPNGAGKTTLFRMIMGLEQPDAGELLIGETVQLAYVDQSRDALK-ATNNVWQEISGGEEKILVGKREVPSRAYVSSFNFAGSDQQKKVGDLSGGERNRVHLAKLLQRGGNVLLLDEPTNDLDVDTLRALEEALLNFAGCAVVISHDRWFLDRIATHILAFEGDAKVVWFQGNYQDYEADLKRRLGAKADEPRKFRYRKLTS 558          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|1057090118|ref|WP_068491051.1| (ABC transporter ATP-binding protein [Magnetospirillum marisnigri] >gi|1032079259|gb|OAN52226.1| energy-dependent translational throttle protein EttA [Magnetospirillum marisnigri])

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 334/564 (59.22%), Postives = 427/564 (75.71%), Query Frame = 0
Query:  103 EYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELEGPT---VGDELEKAVAETRGLLKEYETVSASLGKPDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGV--EPKRPKFRPL 661
            +Y+Y M  ++K +    G K ++K ++LSF PG KIGVLG NGAGKSTL+KIMAG+D ++ GEA  A   K+GYL QEP L+ PT   +G+ +E AVA+T+ LL  +E VSA   + +L+ +E   L     ELQ +I+  N W+L R LE AMDALRCPP +A VA LSGGERRRVALCRLLL+ PD+LLLDEPTNHLDAESVAWLE FL DY GTVV +THDRYFLDNV GWILEL+RG GIP+EGNY+ WLE+K KRLEQE RE+  R +A+  ELEW+R SPKARQTK+KARI+++E +V   +E      +GP  I IPPGP L  KV+EAEN+ K +GD LL++ ++F LP GG+VG+IG NG GK+TLF++I G E P  G  ++G+TV + YVDQ+R+++ DP KTV+  ++DG E+I+LG+R +NSRAY G FNFKGADQQK VG+LSGGERNR+ LA+ L +  N++LLDEPTNDLDV+TL ALEDA+  + GCAV+ISHDR+FLDRVATHILAFE D  VVWFEG++ +Y+ D + R G    +P R K++PL
Sbjct:    5 QYVYVMKNLTKAY---PGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKEYGGEAWAAEGVKIGYLSQEPHLD-PTKDVLGNVME-AVADTKALLDRFEEVSARFAE-ELSDDEMNDLIAEQGELQEKIDHLNAWDLTRTLEIAMDALRCPPGDAEVATLSGGERRRVALCRLLLSHPDMLLLDEPTNHLDAESVAWLERFLEDYSGTVVMVTHDRYFLDNVTGWILELERGHGIPYEGNYTSWLEQKGKRLEQEEREETARMRAIRDELEWVRSSPKARQTKSKARISAFEDLVNKSQE----KATGPAVISIPPGPRLGGKVIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIGPNGAGKTTLFRMITGAETPTTGTFTVGETVVLGYVDQSRDSL-DPDKTVFQEISDGQEEIDLGRRKINSRAYAGLFNFKGADQQKKVGILSGGERNRVHLAKMLSRPANVILLDEPTNDLDVETLSALEDALAEFPGCAVVISHDRFFLDRVATHILAFEGDSQVVWFEGNYQDYEADRKRRLGAEADQPHRIKYKPL 557          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|495892434|ref|WP_008617013.1| (ABC transporter ATP-binding protein [Magnetospirillum caucaseum] >gi|452965018|gb|EME70048.1| ABC transporter ATP-binding protein [Magnetospirillum caucaseum])

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 332/562 (59.07%), Postives = 420/562 (74.73%), Query Frame = 0
Query:  103 EYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELE-GPTVGDELEKAVAETRGLLKEYETVSASLGKPDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNG--GVEPKRPKFRPL 661
            +Y+Y M  ++K +    G K ++K ++LSF PG KIGVLG NGAGKSTL+KIMAG+D ++ GEA  A   K+GYL QEP L+    V   + +AVAET+ LL  +E VSA   + +LT +E   L     ELQ +I+  N W+L R +E AMDALRCPP +A V  LSGGERRRVALCRLLL+ PD+LLLDEPTNHLDAESVAWLE FL DY GTVV ITHDRYFLDNV GWILEL+RG GIP+EGNY+ WLE+K KRLEQE RE+  R +A+  ELEW+R SPKARQTK+KARI+++E +V   +E      +GP  I +PPGP L  KV+EAEN+ K +GD LL++ ++F LP GG+VG+IG NG GK+TLF++I G E P  G  ++G+TV + YVDQNR+ + DP KT ++ ++DG E+I+LGKR +NSRAY G FNFKGADQQK VGVLSGGERNR+ LA+ L +  N++LLDEPTNDLDV+TL ALEDA+  + GCAV+ISHDR+FLDR+ATHILAFE D  VVWFEG++ +Y+ D   R G    +P R K++PL
Sbjct:    5 QYVYVMKNLTKAY---PGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKEYGGEAWAAEGVKIGYLAQEPHLDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAE-ELTDDEMNALIAEQGELQEKIDHLNAWDLTRTIEIAMDALRCPPGDADVTLLSGGERRRVALCRLLLSHPDMLLLDEPTNHLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGHGIPYEGNYTSWLEQKGKRLEQEEREETSRMRAIRDELEWVRSSPKARQTKSKARISAFEDLVAKSQE----KATGPAVISVPPGPRLGGKVIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIGPNGAGKTTLFRMITGAEQPTTGTFTVGETVVLGYVDQNRDTL-DPDKTAFEEISDGQEEIDLGKRKINSRAYAGLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLDVETLSALEDALAEFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHRRLGTDADQPHRIKYKPL 557          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|1127366232|gb|APR87635.1| (ABC transporter, ATP-binding protein [Minicystis rosea])

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 342/563 (60.75%), Postives = 434/563 (77.09%), Query Frame = 0
Query:  103 EYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELE-GPTVGDELEKAVAETRGLLKEYETVSASLGK-PDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGV--EPKRPKFRPL 661
            ++I+ M  + K       +K VLK + LSFYPG KIGVLG NG+GKSTL++IMAGVD D+ GEA+     ++GYL QEP+L  G TV + +E+AV ETR L+K +E +   LG+ PD    + E L     ELQ +IEA+ GWELDR++ERAMDALR PP +A V  LSGGE+RRVALCRLLL++PD+LLLDEPTNHLDAESVAWLE FLHDY GTVVA+THDRYFLDNVAGWILELDRG G P+EGNYSGWLE+K KRLE E ++++ R K L+RELEW++M+PKARQ K+KARI +YE ++  ++E + +    PT I IP G  L   VVEA+NL K +GDRLL D ++FSLPRGG+VG+IG NG GK+TLF++I GLE PD G L +G+TV++ YVDQ+R+A+ DP K V+  ++ G ++I +GKR + SRAY+  FNF+GADQQK VG LSGGERNR+ LA+ L++GGN+LLLDEPTNDLDVDTLR+LE+A+  +AGCAV+ISHDR+FLDR+ATHILAFE D  VVWFEG++  Y+ DL+ R G    EP R K+R L
Sbjct:    4 QFIFTMQDVRKVHPP---NKEVLKGLWLSFYPGAKIGVLGINGSGKSTLLRIMAGVDKDYMGEAKALDGTRIGYLAQEPKLSPGKTVFEVVEEAVHETRSLVKRFEEIGVLLGEGPD----DMEKLLEEYAELQDKIEASGGWELDRVVERAMDALRLPPADAKVDVLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLERFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGSGYPYEGNYSGWLEQKRKRLEMEQKQESSRQKTLARELEWVQMNPKARQAKSKARIAAYETLLAQEKEKQYD----PTVINIPAGERLGNTVVEAKNLRKAFGDRLLVDDLNFSLPRGGIVGIIGPNGAGKTTLFRMIMGLEKPDSGELKIGETVQLAYVDQSRDAL-DPGKNVWQEISGGEDRILVGKREIASRAYVSAFNFQGADQQKKVGDLSGGERNRVHLAKLLRRGGNVLLLDEPTNDLDVDTLRSLEEALLDFAGCAVVISHDRWFLDRIATHILAFEGDSKVVWFEGNYQAYEADLKRRIGAAADEPTRIKYRKL 554          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|1175316741|ref|WP_081864536.1| (energy-dependent translational throttle protein EttA [Chondromyces apiculatus] >gi|599570272|gb|EYF08212.1| ABC transporter, ATP-binding protein [Chondromyces apiculatus DSM 436])

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 339/566 (59.89%), Postives = 438/566 (77.39%), Query Frame = 0
Query:  103 EYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELE-GPTVGDELEKAVAETRGLLKEYETVSASLGK--PDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGP--TNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGV--EPKRPKFRPL 661
            ++I+ M  + K       +K VLK + LSFYPG KIGVLG NG+GKSTL++IMAGVD DF GEA+ A   ++G+L QEP LE G TV + +E+AV  TR L+  +E +   LG+  PD+     E L      LQ +IEA NGWELDR++ERAMDAL+ PP EA+V +LSGGERRRVALCRLLL +PD+LLLDEPTNHLDAESV+WLE FL DY GTVVA+THDRYFLDNVAGWILELDRG GIP+EGNYSGWLE+K KRLE E ++D+ R + L RELEW++M+P+ARQ K+KAR+ +YE ++  D++A +    GP  T I+IP GP L   V+EA++L K +GDRLL D ++FSLPRGG+VG+IG NG GK+TLF++I GLE PD+G L+LG+TV++ YVDQ+R+A+   T +V+  ++ G E+I +GKR V+SRAY+  FNF G+DQQK VG LSGGERNR+ LA+ L++GGN+LLLDEPTNDLDVDTLRALE+A+  +AGCAV+ISHDR+FLDR+ATHILAFE D  VVWF+G+ ++Y+ DL+ R G    EP++ ++R L
Sbjct:    4 QFIFTMQDVRKVHPP---NKEVLKGLWLSFYPGAKIGVLGSNGSGKSTLLRIMAGVDKDFLGEAKAAEGTRIGFLQQEPPLEPGKTVRESVEQAVHATRSLITRFEEIGVKLGESPPDM-----EALLEEYAVLQDKIEAANGWELDRLIERAMDALKLPPPEAMVDHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVSWLERFLGDYPGTVVAVTHDRYFLDNVAGWILELDRGHGIPYEGNYSGWLEQKKKRLESEQKQDSSRKRTLERELEWVQMAPRARQAKSKARLAAYETLLAEDQKASK----GPEITEIHIPAGPRLGNNVIEAKHLRKAFGDRLLIDDLNFSLPRGGIVGIIGPNGAGKTTLFRMIMGLEKPDEGELALGETVQLAYVDQSRDALK-ATNSVWQEISGGDERITVGKREVSSRAYVSSFNFAGSDQQKKVGDLSGGERNRVHLAKLLQRGGNVLLLDEPTNDLDVDTLRALEEALLNFAGCAVVISHDRWFLDRIATHILAFEGDAKVVWFQGNHADYEADLKRRLGAKADEPRKFRYRKL 556          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|496477439|ref|WP_009186200.1| (ABC transporter ATP-binding protein [Cecembia lonarensis] >gi|405552896|gb|EKB48226.1| putative ABC transporter ATP-binding protein YjjK [Cecembia lonarensis LW9])

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 336/560 (60.00%), Postives = 426/560 (76.07%), Query Frame = 0
Query:  105 IYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELE-GPTVGDELEKAVAETRGLLKEYETVSASLGKPDLTSN--EQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGVEPKRPKFRPL 661
            I+ M  +SK +      K VLKDI LSF+ G KIGVLG NG+GKS+L++++AGVD DF GE   +    +G L QEP+L+   TV + +E+AVAET GLLKE+E ++     P L  +    + L  +  E+Q +++A N WELD MLERAMDALR PP EAIV NLSGGE+RRVALCRLLL  PD+LLLDEPTNHLDAESV WLE  L  YKGTV+A+THDRYFLDNVAGWILELDRGEGIP++GNYS WLE+K  RL+QE + ++KR K L RELEW+RM+PKARQ K KAR+++Y+++V   EE++E  +     ++IPPGP L AKV+E   + K YGD+LL++ +SFSLP+GG+VG+IG NG GKSTLFKLI G E PD G   +GDTVK+ YVDQ  + + DP KTVY  +++G E ++LG + VN+RAY+  FNF G+DQ+K +GVLSGGERNR+ LA TLK+GGNLLLLDEPTNDLDV+TLRALE+A+E + GCAVIISHDR+FLDR+ THILAFE D  V WFEG+FS+Y+ + + R G V PKR K++ L
Sbjct:    7 IFSMAGVSKIYPP---QKKVLKDIYLSFFYGAKIGVLGLNGSGKSSLLRVIAGVDKDFLGEVVWSPGYSVGMLEQEPQLDPDKTVKEIVEEAVAETVGLLKEFEEINEKFMDPALMEDPDAMDKLIQKQGEVQEKLDAANAWELDTMLERAMDALRLPPSEAIVGNLSGGEKRRVALCRLLLQEPDVLLLDEPTNHLDAESVLWLEQHLQQYKGTVIAVTHDRYFLDNVAGWILELDRGEGIPWKGNYSSWLEQKQDRLKQEEKTESKRQKTLERELEWIRMAPKARQAKGKARLSAYDKLVS--EESKE--KEAKLELFIPPGPRLGAKVIEVNGVSKAYGDKLLFENLSFSLPQGGIVGIIGPNGAGKSTLFKLITGQEKPDAGHFEIGDTVKLAYVDQEHDNL-DPNKTVYQAISEGNELMKLGNKEVNARAYVSKFNFAGSDQEKKLGVLSGGERNRVHLAMTLKEGGNLLLLDEPTNDLDVNTLRALEEALENFGGCAVIISHDRWFLDRICTHILAFEGDSQVYWFEGNFSDYEENKKKRLGDVTPKRIKYKKL 558          
BLAST of EWM27286.1 vs. NCBI_GenBank
Match: gi|1057021255|ref|WP_068432569.1| (ABC transporter ATP-binding protein [Magnetospirillum sp. XM-1] >gi|972715473|emb|CUW38853.1| fused putative transporter subunits of ABC superfamily: ATP-binding components(ABC transporter, ATP-binding protein, ChvD,5-557) [Magnetospirillum sp. XM-1])

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 330/562 (58.72%), Postives = 422/562 (75.09%), Query Frame = 0
Query:  103 EYIYQMHRMSKTFGKGDGSKPVLKDISLSFYPGVKIGVLGGNGAGKSTLIKIMAGVDDDFNGEARPARWAKLGYLPQEPELE-GPTVGDELEKAVAETRGLLKEYETVSASLGKPDLTSNEQETLNLRMDELQSEIEANNGWELDRMLERAMDALRCPPQEAIVANLSGGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNSRAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGNLLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNG--GVEPKRPKFRPL 661
            +Y+Y M  ++K +    G K ++K ++LSF PG KIGVLG NGAGKSTL+KIMAG+D ++ GEA  A   K+GYL QEP L+    V   + +AVAET+ LL  +E VSA   + +L+ +E   L     ELQ +I+  N W+L R +E AMDALRCPP +A V  LSGGERRRVALCRLLL+ PD+LLLDEPTNHLDAESVAWLE FL DY GTVV ITHDRYFLDNV GWILEL+RG GIP+EGNY+ WLE+K KRLEQE RE+  R +A+  ELEW+R SPKARQTK+KARI+++E +V   +E      +GP  I IPPGP L  KV+EAEN+ K +GD LL++ ++F LP GG+VG+IG NG GK+TLF++I G E P  G+ ++G+TV + YVDQ+R+++ DP KT ++ ++DG E+I+LGKR +N+RAY G FNFKGADQQK VGVLSGGERNR+ LA+ L +  N++LLDEPTNDLDV+TL ALEDA+  + GCAV+ISHDR+FLDR+ATHILAFE D  VVWFEG++ +Y+ D   R G    +P R K++PL
Sbjct:    5 QYVYVMKNLTKAY---PGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKEYGGEAWAAEGVKIGYLAQEPHLDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAE-ELSDDEMNALIAEQGELQEKIDHLNAWDLTRTIEIAMDALRCPPGDADVTLLSGGERRRVALCRLLLSHPDMLLLDEPTNHLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGHGIPYEGNYTSWLEQKGKRLEQEEREETARMRAIRDELEWVRSSPKARQTKSKARISAFEDLVAKSQE----KATGPAVISIPPGPRLGGKVIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIGPNGAGKTTLFRMITGQEQPTSGSFTVGETVVLGYVDQSRDSL-DPEKTAFEEISDGQEEIDLGKRKINARAYAGLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLDVETLSALEDALAEFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHRRLGTDADQPHRIKYKPL 557          
The following BLAST results are available for this feature:
BLAST of EWM27286.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109468|gb|EWM27286.1|0.000e+0100.00abc transporter atp-binding protein [Nannochlorops... [more]
gi|298714250|emb|CBJ27386.1|0.000e+068.77ABC transporter ATP-binding protein [Ectocarpus si... [more]
gi|1176536018|ref|WP_082363010.1|0.000e+059.68energy-dependent translational throttle protein Et... [more]
gi|908359957|gb|AKT42532.1|0.000e+059.68ABC transporter ATP-binding protein [Chondromyces ... [more]
gi|1057090118|ref|WP_068491051.1|0.000e+059.22ABC transporter ATP-binding protein [Magnetospiril... [more]
gi|495892434|ref|WP_008617013.1|0.000e+059.07ABC transporter ATP-binding protein [Magnetospiril... [more]
gi|1127366232|gb|APR87635.1|0.000e+060.75ABC transporter, ATP-binding protein [Minicystis r... [more]
gi|1175316741|ref|WP_081864536.1|0.000e+059.89energy-dependent translational throttle protein Et... [more]
gi|496477439|ref|WP_009186200.1|0.000e+060.00ABC transporter ATP-binding protein [Cecembia lona... [more]
gi|1057021255|ref|WP_068432569.1|0.000e+058.72ABC transporter ATP-binding protein [Magnetospiril... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3397rna3397Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications