EWM27279.1, cds3383 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|585109461|gb|EWM27279.1| (hypothetical protein Naga_100080g10 [Nannochloropsis gaditana]) HSP 1 Score: 890.952 bits (2301), Expect = 0.000e+0 Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0
Query: 1 MYPRWAHGASWEEEGASPPPFSNPMTPLLAYKLTRPHVIHTGQEQGAQFIFSLCTLRAVCRRSRRRGLKMRSQRTRRGGRKGHAHQPLSKTPRHGRFHEATRRIEGGGSNAASLGLLCSLVFVSSVLCLLSLLRAADAARFIRPFGEPPPPPPPMGARYGHGIFDRRHTPAKGGPRNRAEEGGDREGASGGGIGGNVFWKQWHFPVRTRGRNGVDDEDALGSAGTGDFDPLFDGNGLGGREGARAEAAAAEREFESSDRRPWTDLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMGTGDILLSIDELNLCLEY 439
MYPRWAHGASWEEEGASPPPFSNPMTPLLAYKLTRPHVIHTGQEQGAQFIFSLCTLRAVCRRSRRRGLKMRSQRTRRGGRKGHAHQPLSKTPRHGRFHEATRRIEGGGSNAASLGLLCSLVFVSSVLCLLSLLRAADAARFIRPFGEPPPPPPPMGARYGHGIFDRRHTPAKGGPRNRAEEGGDREGASGGGIGGNVFWKQWHFPVRTRGRNGVDDEDALGSAGTGDFDPLFDGNGLGGREGARAEAAAAEREFESSDRRPWTDLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMGTGDILLSIDELNLCLEY
Sbjct: 1 MYPRWAHGASWEEEGASPPPFSNPMTPLLAYKLTRPHVIHTGQEQGAQFIFSLCTLRAVCRRSRRRGLKMRSQRTRRGGRKGHAHQPLSKTPRHGRFHEATRRIEGGGSNAASLGLLCSLVFVSSVLCLLSLLRAADAARFIRPFGEPPPPPPPMGARYGHGIFDRRHTPAKGGPRNRAEEGGDREGASGGGIGGNVFWKQWHFPVRTRGRNGVDDEDALGSAGTGDFDPLFDGNGLGGREGARAEAAAAEREFESSDRRPWTDLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMGTGDILLSIDELNLCLEY 439
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|219126093|ref|XP_002183299.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405055|gb|EEC44999.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 241.121 bits (614), Expect = 1.358e-72 Identity = 106/173 (61.27%), Postives = 143/173 (82.66%), Query Frame = 0
Query: 267 PRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMGTGDILLSIDELNLCLEY 439
P+ + +VEP TTLK+RK F P KTV++LGAD+NTQ+GVWQF+SSWED IIGG+LT+ GRELQ SK+W +++G +D+ TRL+FRA +D TW++YAR+GFRTER+ P+N+ +G TL ++LPLDG GH KLEV+AN LPEPEIEYST+ +R ++G GDI ++I+ELNL L+Y
Sbjct: 175 PKIQCRVEPTTTLKIRKTFRPLKTVVQLGADFNTQLGVWQFRSSWEDAIIGGKLTLAGRELQLSKSWQLSVGAVEDLVTRLRFRAAVDLQTWKAYARVGFRTERLSPINVMEGFTLLKQLPLDGNHGHVKLEVKANFALPEPEIEYSTETQRSLIGMGDIEVNIEELNLVLDY 347
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|298706541|emb|CBJ29511.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 238.039 bits (606), Expect = 2.524e-72 Identity = 107/179 (59.78%), Postives = 139/179 (77.65%), Query Frame = 0
Query: 264 DLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTD---KKRLIMGTGDILLSIDELNLCLEY 439
DL P RV ++P T+LKLRKR YP KTV+ LGADYNTQIGVWQF+S+WED IIGGR+++ GRE+ +K+WL+ + D +D+ATRLKFRA I+T W +YA+ GFRTERI PLN+KDG L ++ PLDG GHAKLEV + L LPEPE+++ST+ K +++G GD+ L I+E NL LEY
Sbjct: 94 DLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVSKLALPEPELQFSTNGDTSKGVVIGMGDVNLGIEEFNLLLEY 272
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|1210523390|dbj|GAX18027.1| (hypothetical protein FisN_18Hh242 [Fistulifera solaris]) HSP 1 Score: 229.95 bits (585), Expect = 8.977e-69 Identity = 103/184 (55.98%), Postives = 141/184 (76.63%), Query Frame = 0
Query: 256 SSDRRPWTDLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMGTGDILLSIDELNLCLEY 439
S++ P P+ +VEP TTLKLRK F P T+I LGA++NTQ+ VWQFKS WED IIGG+LT+ GRELQ +K+W +++G +D+ TRL+FRA +D TW++YAR+GFRTER+ P+N+ +G T ++ +PLDG GH KL+V+AN LPEPEIEYST+ +R ++G GDI +SI+ELNL L+Y
Sbjct: 128 SANISPSVKSWPKIVCRVEPTTTLKLRKTFRPLGTIIRLGANFNTQLQVWQFKSDWEDAIIGGKLTLAGRELQLTKSWQLSVGAVEDLVTRLRFRAAVDLSTWKAYARVGFRTERLSPINIMEGFTFQKEVPLDGPSGHVKLQVKANFALPEPEIEYSTETQRSLIGMGDIQVSIEELNLLLDY 311
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|1210523628|dbj|GAX17588.1| (hypothetical protein FisN_18Lh242 [Fistulifera solaris]) HSP 1 Score: 224.557 bits (571), Expect = 9.908e-68 Identity = 101/173 (58.38%), Postives = 137/173 (79.19%), Query Frame = 0
Query: 267 PRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMGTGDILLSIDELNLCLEY 439
P+ +VEP TTLKLRK F P T+I LGA++NTQ+ VWQFKS WED IIGG+LT+ GRELQ +K+W +++G +D+ TRL+FRA +D TW++YAR+GFRTER+ P+N+ +G T ++ +PLDG GH KL+V+AN LPEPEIEYST+ +R ++G GDI +SI+ELNL L+Y
Sbjct: 60 PKIVCRVEPTTTLKLRKTFRPLGTIIRLGANFNTQLQVWQFKSDWED-IIGGKLTLAGRELQLTKSWQLSVGAVEDLVTRLRFRAAVDLSTWKAYARVGFRTERLSPINIMEGFTFQKEVPLDGPSGHVKLQVKANFALPEPEIEYSTETQRSLIGMGDIQVSIEELNLLLDY 231
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|1072235216|gb|OEU19945.1| (hypothetical protein FRACYDRAFT_236006 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 217.624 bits (553), Expect = 4.319e-63 Identity = 101/180 (56.11%), Postives = 140/180 (77.78%), Query Frame = 0
Query: 261 PWTDLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKG-RELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMGTGDILLSIDELNLCLEY 439
P +P+ ++EP TTLK+RK F P KT+I LGADYNTQ GVWQFKSSWED IIG +LT+ G RELQ +K+W +++G +D+ TRL+FRA I+ T++ R+GFRTER+ P+++ +G ++ +RLPLDG+ G+ KLEV+AN+ LPEPEIEYST+ +R ++G GDI +SIDE+NL L+Y
Sbjct: 200 PKIQRLPKIICRIEPSTTLKIRKTFRPLKTIIRLGADYNTQQGVWQFKSSWEDAIIGSKLTLTGNRELQLTKSWQLSVGAVEDLVTRLRFRAAINLQTFQGTVRVGFRTERLTPIDVVEGFSILKRLPLDGSGGNLKLEVKANVALPEPEIEYSTEAQRSLIGMGDIEVSIDEMNLLLDY 379
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|873231051|emb|CEM09184.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 166.777 bits (421), Expect = 1.091e-44 Identity = 75/179 (41.90%), Postives = 117/179 (65.36%), Query Frame = 0
Query: 266 IPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLG--DQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKK---RLIMGTGDILLSIDELNLCLEY 439
+PR ++K EP T LK+RK +P KT + +GADY+ Q W+ SSW+D +IGG +T+ GRE +K W + DQ + +L+ AG++ T R +A+ R ER+ P+ DG+ + +R+PLDG G+AKLEV+ + PEP++EYSTD++ ++ G GD+ ++I++LNLC EY
Sbjct: 110 LPRIKIKTEPKTFLKIRKTLFPLKTRLTVGADYSLQDRQWKLVSSWQDNVIGGTITLNGREFSIAKDWFLPFSEIDQHQVGAKLRVHAGLNMDTGRLFAKFRMRAERLAPIAFGDGIRIDQRVPLDGRNGNAKLEVKGRVSFPEPQVEYSTDRQGNVGIMTGMGDVEVAIEQLNLCFEY 288
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|545706842|ref|XP_005705737.1| (hypothetical protein isoform 1 [Galdieria sulphuraria] >gi|452822195|gb|EME29217.1| hypothetical protein isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 102.064 bits (253), Expect = 5.990e-22 Identity = 68/173 (39.31%), Postives = 91/173 (52.60%), Query Frame = 0
Query: 267 PRFRVKVEPLTTLKLRKRFYPFK-TVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMGTGDILLSIDELNLCLE 438
P+ K P T LKLRK FYP T + LGAD + Q G W F ++W+DRIIGGRL VK ++ K +LV + +I ++ G +R G +T P G+ LRR++PLD KL+V A L PE E +T + GTGD +L I +LNL LE
Sbjct: 5 PKLVWKCNPSTKLKLRKHFYPLALTKLTLGADLDLQHGFWTFHTAWKDRIIGGRLAVKDNQVSLVKEFLVDQKNTFNIHISYDWKIGQTLFGFRFSPYRGIQTNTHPP-----GMALRRKIPLD---YRTKLDVFAWLQFPEATCE-ATSTGAVSFGTGDFILDIQQLNLYLE 168
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|223999949|ref|XP_002289647.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974855|gb|EED93184.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 106.301 bits (264), Expect = 8.387e-22 Identity = 74/223 (33.18%), Postives = 108/223 (48.43%), Query Frame = 0
Query: 260 RPWTDL-----IPRFRVKVEPLTTLKLRKRFYPFK--TVIELGADYNTQI----GVWQFKSSWEDRIIGGRLTVKGRE-------LQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPL----------------NLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTDKKRLIMG---------TGDILLSIDELNLCLEY 439
R WT IP V +P+T LKLRK + ++I +GAD+ T GVW+ ++ ED+ IGGR +KG+ L++SK+WL +ATR A D T R AR GFR+E + + + T+ LPLDG +G+ KLEV+ ++ LPEPEI D R+ G GD+ + I+ELNL +++
Sbjct: 144 RQWTHTKTGIRIPNVNVYFDPITILKLRKSWNGIIPGSIIRVGADFETHHRLVGGVWRLRACLEDKFIGGRFIIKGKRNGDEGVLLEYSKSWL--FAGAGSLATRFNLNAQYDIKTNRCSARFGFRSENMGTVGSFVSSRGVFGGMGGGGGRQSFTIVPILPLDGRDGNVKLEVKTSIELPEPEIVVGMDLDRVSAGGSSSVAMGVGGDVDMEIEELNLIVDF 364
BLAST of EWM27279.1 vs. NCBI_GenBank
Match: gi|397641176|gb|EJK74514.1| (hypothetical protein THAOC_03801 [Thalassiosira oceanica]) HSP 1 Score: 85.1149 bits (209), Expect = 8.732e-15 Identity = 65/194 (33.51%), Postives = 95/194 (48.97%), Query Frame = 0
Query: 266 IPRFRVKVEPLTTLKLRKRFYPFK--TVIELGADYNTQI---GVWQFKSSWEDRIIGGRLTVKGRE----------LQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNL----KDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPE----IEYSTDKK---RLIMGTGDILLSIDEL 433
IPR V +P+TTLKLRK + +I +GAD T G W+ + ED+IIGGR ++ R + +SK+W + TRL A D T R R+GF+ E + L + GV++ LPLD + +LEV++N+ LP PE + S D L +G GD+ + I+EL
Sbjct: 109 IPRISVGFDPITTLKLRKSWENILPWAIIRVGADLETHRLGRGAWKLRGCLEDKIIGGRFSLNERYNRDTDQRALLVGYSKSWFIANDYGAGSGTRLNISADYDVKTRRGGIRMGFQQESVWQSYLLPGRRRGVSIVPTLPLD-VDRRVQLEVKSNIELPAPEFGLGVSMSLDSDAPVELDIGVGDVNVDIEEL 301 The following BLAST results are available for this feature:
BLAST of EWM27279.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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