EWM27285.1, cds3381 (CDS) Nannochloropsis gaditana

Overview
NameEWM27285.1
Unique Namecds3381
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:292583..294145 +

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Properties
Property NameValue
Protein idEWM27285.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100080g8.2849.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:292583..294145 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27285.1 vs. NCBI_GenBank
Match: gi|585109467|gb|EWM27285.1| (hypothetical protein Naga_100080g8 [Nannochloropsis gaditana])

HSP 1 Score: 1052.35 bits (2720), Expect = 0.000e+0
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0 
Query:    1 MAGSRKKGKQSRDGYSKKDQAHKWLQMLAEAHYQLRRSGNTTATTATAATRKESAANCNANGGWAQRFRLRHQHHMHAGYRWSQSGSGGPRLNPLEAARFIESYLREPSTAASAAWVYKVTGRTGRREGAETRKATGGTRRDRGLCEWWQRVGESSESGSLCADRRVDEKPNGVVTLTELCCRQIGADLALYGAATAAGSDPMTAQMADLAIHSEDKQKTESSLVASTRTVSDGSADGRVEERGNEGEGEGEGRLTYRGGLEGISETSVAASIRTMFSLLPPMCLAHISLAASLAQAVTDAALPLLCQPSALCLALVGDYTDEGLIKALSPRLGNAFAQFSWECARVEPRLEGCVALESLYLRSPCLTPSCLGEVGGRLSTVKSLTLSRCFNADVTMTAKEVLAHIGASWHYLEELSLEGCRWLSEKAVLKWAGGKEKVMNARGREGGEGGKEWVDEEAAVWQMGKRLGRDIPSVLGLEASLSPCAPPAALRRLRVDVRLANRALVRQAWESRGVVVEEW 520
            MAGSRKKGKQSRDGYSKKDQAHKWLQMLAEAHYQLRRSGNTTATTATAATRKESAANCNANGGWAQRFRLRHQHHMHAGYRWSQSGSGGPRLNPLEAARFIESYLREPSTAASAAWVYKVTGRTGRREGAETRKATGGTRRDRGLCEWWQRVGESSESGSLCADRRVDEKPNGVVTLTELCCRQIGADLALYGAATAAGSDPMTAQMADLAIHSEDKQKTESSLVASTRTVSDGSADGRVEERGNEGEGEGEGRLTYRGGLEGISETSVAASIRTMFSLLPPMCLAHISLAASLAQAVTDAALPLLCQPSALCLALVGDYTDEGLIKALSPRLGNAFAQFSWECARVEPRLEGCVALESLYLRSPCLTPSCLGEVGGRLSTVKSLTLSRCFNADVTMTAKEVLAHIGASWHYLEELSLEGCRWLSEKAVLKWAGGKEKVMNARGREGGEGGKEWVDEEAAVWQMGKRLGRDIPSVLGLEASLSPCAPPAALRRLRVDVRLANRALVRQAWESRGVVVEEW
Sbjct:    1 MAGSRKKGKQSRDGYSKKDQAHKWLQMLAEAHYQLRRSGNTTATTATAATRKESAANCNANGGWAQRFRLRHQHHMHAGYRWSQSGSGGPRLNPLEAARFIESYLREPSTAASAAWVYKVTGRTGRREGAETRKATGGTRRDRGLCEWWQRVGESSESGSLCADRRVDEKPNGVVTLTELCCRQIGADLALYGAATAAGSDPMTAQMADLAIHSEDKQKTESSLVASTRTVSDGSADGRVEERGNEGEGEGEGRLTYRGGLEGISETSVAASIRTMFSLLPPMCLAHISLAASLAQAVTDAALPLLCQPSALCLALVGDYTDEGLIKALSPRLGNAFAQFSWECARVEPRLEGCVALESLYLRSPCLTPSCLGEVGGRLSTVKSLTLSRCFNADVTMTAKEVLAHIGASWHYLEELSLEGCRWLSEKAVLKWAGGKEKVMNARGREGGEGGKEWVDEEAAVWQMGKRLGRDIPSVLGLEASLSPCAPPAALRRLRVDVRLANRALVRQAWESRGVVVEEW 520
The following BLAST results are available for this feature:
BLAST of EWM27285.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109467|gb|EWM27285.1|0.000e+0100.00hypothetical protein Naga_100080g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3390rna3390Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications