EWM30288.1, cds338 (CDS) Nannochloropsis gaditana

Overview
NameEWM30288.1
Unique Namecds338
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:835174..835301 +
Alignment locationCM002455.1:835884..836260 +
Alignment locationCM002455.1:836318..836409 +

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Properties
Property NameValue
Protein idEWM30288.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g159.1805.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:835174..835301 +
CM002455.1supercontigCM002455.1:835884..836260 +
CM002455.1supercontigCM002455.1:836318..836409 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30288.1 vs. NCBI_GenBank
Match: gi|585112947|gb|EWM30288.1| (hypothetical protein Naga_100003g159 [Nannochloropsis gaditana])

HSP 1 Score: 418.313 bits (1074), Expect = 3.052e-148
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 
Query:    1 MKGFLTGGKITVLTTRSNNSKKQAIMLAKLAKVPCLMLCYLFWAVRGICSVHTLKKPAQQSSPHMDRQKFEAMFPSLVAHYPKVRGREHYSPPERRTPRPATQHVADGADLTARISSHGVLWAAFEDLLSIFFGTDDVACVKRTFATVYEEHLNSLNLEQIEEVAKCTVGNRGRTTNSCQLRAIAACKDCNFWRKRLN 198
            MKGFLTGGKITVLTTRSNNSKKQAIMLAKLAKVPCLMLCYLFWAVRGICSVHTLKKPAQQSSPHMDRQKFEAMFPSLVAHYPKVRGREHYSPPERRTPRPATQHVADGADLTARISSHGVLWAAFEDLLSIFFGTDDVACVKRTFATVYEEHLNSLNLEQIEEVAKCTVGNRGRTTNSCQLRAIAACKDCNFWRKRLN
Sbjct:    1 MKGFLTGGKITVLTTRSNNSKKQAIMLAKLAKVPCLMLCYLFWAVRGICSVHTLKKPAQQSSPHMDRQKFEAMFPSLVAHYPKVRGREHYSPPERRTPRPATQHVADGADLTARISSHGVLWAAFEDLLSIFFGTDDVACVKRTFATVYEEHLNSLNLEQIEEVAKCTVGNRGRTTNSCQLRAIAACKDCNFWRKRLN 198
The following BLAST results are available for this feature:
BLAST of EWM30288.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112947|gb|EWM30288.1|3.052e-148100.00hypothetical protein Naga_100003g159 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna338rna338Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications