EWM27287.1, cds3378 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|585109469|gb|EWM27287.1| (hypothetical protein Naga_100080g3 [Nannochloropsis gaditana]) HSP 1 Score: 323.939 bits (829), Expect = 6.701e-112 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MPFVYTSLLLSGSRDQIPPAWPFTLASFALGFFALGPYLALRRYRPFPDTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTLKGEAGAEG 166
MPFVYTSLLLSGSRDQIPPAWPFTLASFALGFFALGPYLALRRYRPFPDTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTLKGEAGAEG
Sbjct: 1 MPFVYTSLLLSGSRDQIPPAWPFTLASFALGFFALGPYLALRRYRPFPDTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTLKGEAGAEG 166
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|303288297|ref|XP_003063437.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226455269|gb|EEH52573.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 106.686 bits (265), Expect = 5.192e-25 Identity = 80/172 (46.51%), Postives = 100/172 (58.14%), Query Frame = 0
Query: 1 MPFVYTSLLLSGSRDQ-IPPAWPFTLASFALGFFALGPYLALRRYRPFPDTA--HASP------WLTR-VMESKLPALLAFLASLYLAWLIV--DGLVSAGGREAYLSLFYSQT-LPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTLK 159
+P VY +LLL G+RDQ P P +ASFALGFFALGPYL RR R TA ++P W TR V ESK A +L+ +LI V A E + +L+ Q+ L VSS DL +LSL + D L EDM RR + G+ L F ALPV+GPCL+LL RP L+
Sbjct: 126 VPAVYAALLLPGARDQPRVPTLPPVVASFALGFFALGPYLITRRVRVVLSTAPRTSAPRRSELGWATRTVFESKP---FALFQTLFATFLIAYAASHVDAETLEGFATLWREQSALACVSSCDLLVLSLAMYDALSEDMKRRGVFERGKALGFCALPVLGPCLWLLTRPALE 294
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|255088936|ref|XP_002506390.1| (predicted protein [Micromonas commoda] >gi|226521662|gb|ACO67648.1| predicted protein [Micromonas commoda]) HSP 1 Score: 99.3673 bits (246), Expect = 1.708e-22 Identity = 70/162 (43.21%), Postives = 93/162 (57.41%), Query Frame = 0
Query: 1 MPFVYTSLLLSGSRDQ--IPPAWPFTLASFALGFFALGPYLALRRYRPFPDTAHASPWLTR-VMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQT-LPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTL 158
+P VY +LLL G++DQ IP P ASFALGFFALGPYL R R P + W TR + ESK+ A + +L S EA+++++ Q+ L VSS DL +LS+ + L EDM RR Y + AF A+PV+GPC+YLL RP+L
Sbjct: 92 VPAVYAALLLPGAKDQPRIPTVPPLA-ASFALGFFALGPYLIAREPRTEPVPRSSLGWATRTIFESKVFAAFNAAFAAFLIAYGAANFTSDAA-EAFVAMWRDQSALACVSSCDLTVLSIAMYGALAEDMRRRGCYDGAKAAAFCAVPVLGPCVYLLTRPSL 251
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|1199294173|gb|OUS49254.1| (hypothetical protein BE221DRAFT_188507 [Ostreococcus tauri]) HSP 1 Score: 99.7525 bits (247), Expect = 2.221e-22 Identity = 73/163 (44.79%), Postives = 96/163 (58.90%), Query Frame = 0
Query: 1 MPFVYTSLLLSGSRDQIPPAWPFTLASFALGFFALGPYLALR--RYRPFPDTAHASPWLTR-VMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQT-LPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTLK 159
+P Y LLL G++ Q PA ASFALGFFALGPYLA R R P P + W+TR V ESKL A+ + +LA+ V L S +++L Q+ L VS+ DL +LS +VD + EDM RR P LA+ A+PVVGP L+L+LRP+L+
Sbjct: 118 VPATYACLLLPGAKGQKLPAALCVGASFALGFFALGPYLATRAPRTTPAPRRSELG-WVTRNVWESKLNAVALLGFASFLAYYGVSNL-SPENVSGFIALIREQSMLACVSTCDLVVLSACMVDAIGEDMKRRN-VDPSGALAYAAVPVVGPALWLVLRPSLE 277
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|693500184|emb|CEF97429.1| (unnamed product [Ostreococcus tauri]) HSP 1 Score: 98.5969 bits (244), Expect = 4.741e-22 Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = 0
Query: 1 MPFVYTSLLLSGSRDQIPPAWPFTLASFALGFFALGPYLALR--RYRPFPDTAHASPWLTR-VMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQT-LPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTLK 159
+P Y LLL G++ Q PA ASFALGFFA+GPYLA R R P P + W+TR V ESKL A+ + +LA+ V L S +++L Q+ L VS+ DL +LS +VD + EDM RR P LA+ A+PVVGP L+L+LRP+L+
Sbjct: 118 VPATYACLLLPGAKGQKLPAALCVGASFALGFFAVGPYLATRAPRTTPAPRRSELG-WVTRNVWESKLNAVALLGFASFLAYYGVSNL-SPENVSGFIALIREQSMLACVSTCDLVVLSACMVDAIGEDMKRRN-VDPSGALAYAAVPVVGPALWLVLRPSLE 277
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|922858142|gb|KOO26313.1| (hypothetical protein Ctob_005005 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 97.0561 bits (240), Expect = 7.758e-22 Identity = 71/169 (42.01%), Postives = 91/169 (53.85%), Query Frame = 0
Query: 1 MPFVYTSLLLSGSRDQIPPAWPFTLASFALGFFALGPYLALRRYRPFPDTAHASPWLTR-VMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWY-SPG---------RLLAFVALPVVGPCLYLLLRPTL 158
+P +Y ++LL G++DQ P SF GF LGPYL LR+ RP P + ++ R V ESKL + L SL L + Y SLF + +VSS DL +LSLF +PLREDM RR WY +PG RL AF A+PV+GP Y+L RP L
Sbjct: 52 LPALYAAVLLPGAKDQRPAPPALIATSFFAGFGGLGPYLFLRQPRPQPISRAELGFIARTVTESKLFGVAMVLTSLGLGAKLATIPDFDAALATYWSLFDQFGIVNVSSFDLLVLSLFFFEPLREDMQRRGWYAAPGEDPSTEEIARLAAFCAVPVLGPAAYVLARPAL 220
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|645247332|ref|XP_008229787.1| (PREDICTED: uncharacterized protein LOC103329132 [Prunus mume]) HSP 1 Score: 94.7449 bits (234), Expect = 4.066e-20 Identity = 66/167 (39.52%), Postives = 86/167 (51.50%), Query Frame = 0
Query: 2 PFVYTSLLLSGSRDQIP--PAWPFTLASFALGFFALGPYLALRRYRPFP-DTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVAL-PVVGPCLYLLLRPTLKGEAGA 164
P VY+ LLL R P WPF + SF G +AL PY L R P P D + + W +ESKL A ++ A L + +I GL + Y F HV SLD LLS F + DM R+W+ G L FV+L P++GP LYL+LRP+L EA +
Sbjct: 169 PLVYSMLLLPTGRSSKSKVPVWPFLILSFFGGAYALLPYFVLWRPPPPPVDESELTKWPLNFLESKLTAWISLAAGLGI--VIYAGLADGADWKEYYQYFKGSKFIHVMSLDFTLLSAFAPFWVYNDMTSRKWFDKGSWLLFVSLVPLIGPALYLVLRPSLSTEANS 333
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|1139784249|gb|ONI18076.1| (hypothetical protein PRUPE_3G195700 [Prunus persica]) HSP 1 Score: 93.9745 bits (232), Expect = 7.219e-20 Identity = 66/167 (39.52%), Postives = 86/167 (51.50%), Query Frame = 0
Query: 2 PFVYTSLLLSGSRDQIP--PAWPFTLASFALGFFALGPYLALRRYRPFP-DTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVAL-PVVGPCLYLLLRPTLKGEAGA 164
P VY+ LLL R P WPF + SF G +AL PY L R P P D + + W +ESKL A ++ A L + +I GL + Y F HV SLD LLS F + DM R+W+ G L FV+L P++GP LYL+LRP+L EA +
Sbjct: 156 PLVYSMLLLPTGRSSKSKVPVWPFLILSFFGGAYALLPYFVLWRPPPPPVDESELTKWPLNFLESKLTAWISLAAGLGI--VIYAGLADGADWKEYYQYFNGSKFIHVMSLDFTLLSAFAPFWVYNDMTSRKWFDKGFWLLFVSLVPLIGPALYLVLRPSLSTEANS 320
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|1162535978|ref|XP_020416343.1| (uncharacterized protein LOC18783660 [Prunus persica] >gi|1139784250|gb|ONI18077.1| hypothetical protein PRUPE_3G195700 [Prunus persica]) HSP 1 Score: 93.9745 bits (232), Expect = 7.309e-20 Identity = 66/167 (39.52%), Postives = 86/167 (51.50%), Query Frame = 0
Query: 2 PFVYTSLLLSGSRDQIP--PAWPFTLASFALGFFALGPYLALRRYRPFP-DTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVAL-PVVGPCLYLLLRPTLKGEAGA 164
P VY+ LLL R P WPF + SF G +AL PY L R P P D + + W +ESKL A ++ A L + +I GL + Y F HV SLD LLS F + DM R+W+ G L FV+L P++GP LYL+LRP+L EA +
Sbjct: 170 PLVYSMLLLPTGRSSKSKVPVWPFLILSFFGGAYALLPYFVLWRPPPPPVDESELTKWPLNFLESKLTAWISLAAGLGI--VIYAGLADGADWKEYYQYFNGSKFIHVMSLDFTLLSAFAPFWVYNDMTSRKWFDKGFWLLFVSLVPLIGPALYLVLRPSLSTEANS 334
BLAST of EWM27287.1 vs. NCBI_GenBank
Match: gi|501726042|ref|WP_012626242.1| (hypothetical protein [Cyanothece sp. PCC 7425] >gi|219862805|gb|ACL43144.1| conserved hypothetical protein [Cyanothece sp. PCC 7425]) HSP 1 Score: 91.6633 bits (226), Expect = 8.551e-20 Identity = 63/157 (40.13%), Postives = 88/157 (56.05%), Query Frame = 0
Query: 2 PFVYTSLLLSGSRDQIPPAWPFTLASFALGFFALGPYLALRRYRPFPDTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTL 158
P +Y+ LL R Q PAWPF LASF +G FAL PYLALR +P P WL +V++S+ L+ L ++ L+ GL+ G++ ++ + +Q HV SLD LLSL LR+D+ RR +P A +P+ GP LYL +RP L
Sbjct: 59 PMIYSCLLCFDGRGQKVPAWPFALASFGVGAFALLPYLALR--QPNPHFEGKKSWLLQVLDSRWLGLILTLGAIA---LVAYGLIGGDGQD-FIQQWQTQRFIHVMSLDFCLLSLLFPVLLRDDLARRGLQNPVWFWAIALIPLFGPLLYLCVRPPL 209 The following BLAST results are available for this feature:
BLAST of EWM27287.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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