EWM27309.1, cds3365 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27309.1 vs. NCBI_GenBank
Match: gi|585109504|gb|EWM27309.1| (hypothetical protein Naga_101715g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 314.694 bits (805), Expect = 1.741e-108 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 LSSASSSLPPQYPPSLPPSRPDYRLNFALHCGSVSGPVPAVPIFSRDALEEQLEMMMRWALARSCRLEGGGGGGGRKGGREGRYMSLPRMCWWYHKDFAPDLMAAIVPPAVGGEAAGGEAVDGGRGEGEREGGREGAEHEFEWGEGGREGGVGGSILALLL 161
LSSASSSLPPQYPPSLPPSRPDYRLNFALHCGSVSGPVPAVPIFSRDALEEQLEMMMRWALARSCRLEGGGGGGGRKGGREGRYMSLPRMCWWYHKDFAPDLMAAIVPPAVGGEAAGGEAVDGGRGEGEREGGREGAEHEFEWGEGGREGGVGGSILALLL
Sbjct: 1 LSSASSSLPPQYPPSLPPSRPDYRLNFALHCGSVSGPVPAVPIFSRDALEEQLEMMMRWALARSCRLEGGGGGGGRKGGREGRYMSLPRMCWWYHKDFAPDLMAAIVPPAVGGEAAGGEAVDGGRGEGEREGGREGAEHEFEWGEGGREGGVGGSILALLL 161
BLAST of EWM27309.1 vs. NCBI_GenBank
Match: gi|1072225501|gb|OEU10248.1| (hypothetical protein FRACYDRAFT_247863 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.5514 bits (166), Expect = 1.815e-10 Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 0
Query: 20 RPDYRLNFALHCGSVSGPVPAVPIFSRDALEEQLEMMMRWALAR--SCRLEGGGGGGGRKGGREGRYMSLPRMCWWYHKDFAP-----DLMAAIVP 108
RPD+R+NFAL+ GS+S P +VP++ D L +QL + R + S +L +KG ++ ++LP++C W+ +DF P D++ AI P
Sbjct: 1033 RPDFRINFALNAGSLSVPTSSVPVYKADILSKQLNQITRQFVGYTISAKL--------KKGSKDDVQITLPKICQWFAEDFGPNASASDVIVAIEP 1120 The following BLAST results are available for this feature:
BLAST of EWM27309.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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