EWM27322.1, cds3352 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|585109522|gb|EWM27322.1| (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG [Nannochloropsis gaditana]) HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
Query: 1 MASPAPEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQVRRGGVKVFGKLVWNPCDDVRVGDSSCSLSVSSVPVRFG 331
MASPAPEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQVRRGGVKVFGKLVWNPCDDVRVGDSSCSLSVSSVPVRFG
Sbjct: 1 MASPAPEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQVRRGGVKVFGKLVWNPCDDVRVGDSSCSLSVSSVPVRFG 331
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|585109521|gb|EWM27321.1| (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG [Nannochloropsis gaditana]) HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0 Identity = 293/298 (98.32%), Postives = 294/298 (98.66%), Query Frame = 0
Query: 1 MASPAPEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQVRRGGV 298
MASPAPEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ G+
Sbjct: 1 MASPAPEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQKDVSGL 298
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|551607384|ref|XP_005785006.1| (putative lysine decarboxylase, partial [Emiliania huxleyi CCMP1516] >gi|485638133|gb|EOD32577.1| putative lysine decarboxylase, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 312.383 bits (799), Expect = 1.101e-102 Identity = 151/287 (52.61%), Postives = 199/287 (69.34%), Query Frame = 0
Query: 14 VKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVT-EQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKE-HPEQ------SIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292
KAY+N DFLNS HAR +R++ EYEETM RL+A GV++TI FGSARAK R QYD M ELVE L A +E + E I L+ EW+ +Y + EL++RLT+WS+ Q+R + PVPH+ ++ + ++ HPE +++I TGGGPGFMEAAN+GAS VPG + GMGI+LPFE GLNPYV+ ELAFE+HYFFTRKF M Y+ QALV APGG GT+DE FE++TLKQTGK+ MPVVLFGK++W ++++W A+AD+G I++
Sbjct: 3 TKAYRNQDFLNSAHARHLRILAEYEETMQRLRASGVRATIQVFGSARAKDRGQYDRSMAELVEQLEAAKPGSEEHAEVEERITKLKSIEWMCDYMASIEELARRLTEWSMGKR----QSRQMS-----------PVPHRRFAYLPHSSEDNHPESRAPKAANLFIATGGGPGFMEAANRGASRVPGGRSAGMGISLPFETGLNPYVTPELAFEYHYFFTRKFAMAYYMQALVAAPGGFGTMDEFFELITLKQTGKMNQAMPVVLFGKKYWNTVVNWHAIADFGTINR 274
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|551616403|ref|XP_005789045.1| (hypothetical protein EMIHUDRAFT_467137 [Emiliania huxleyi CCMP1516] >gi|485642548|gb|EOD36616.1| hypothetical protein EMIHUDRAFT_467137 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 295.434 bits (755), Expect = 6.119e-95 Identity = 152/296 (51.35%), Postives = 203/296 (68.58%), Query Frame = 0
Query: 14 VKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVT-EQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHL--------------KTRGPVPHQSYSIIDEDVKEHPEQS--IYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292
KAYKN FL+S HAR +R++CEYEETM RL+A G+++TI+FFGSAR+K R QYD + + +A+A A EQ A + L+K+EW+ EY +K+ +L++R+T+WS+++++ LA +GV+R + +PH + +D P + IY+ TGGGPGFMEAAN+GA + G ++GMGITLPFE GLNPYV+ ELAFEFHYFFTRKF M YH QALVVAPGG GT DELFE++TLKQTGK+Q +PVVLFGK+FW+ +ALAD G I+Q
Sbjct: 39 TKAYKNEAFLSSSHARHLRILCEYEETMQRLRANGIRATIMFFGSARSKDRAQYDDALAKSRKAVAEAPDGSSEQALARGTLERLQKSEWMCEYMEKIRQLAQRVTEWSIKTKYSLAN--QVSGVSRATTARLIEEGRKSPAGGRKSAYLPHST-----DDAYPRPADAPGIYVCTGGGPGFMEAANRGAHDA-GGKSVGMGITLPFETGLNPYVTPELAFEFHYFFTRKFSMAYHMQALVVAPGGFGTFDELFELMTLKQTGKMQSGLPVVLFGKQFWQ-----EALADSGTINQ 321
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|401418073|ref|XP_003873528.1| (conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] >gi|322489759|emb|CBZ25019.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103]) HSP 1 Score: 291.967 bits (746), Expect = 4.260e-94 Identity = 142/285 (49.82%), Postives = 201/285 (70.53%), Query Frame = 0
Query: 8 KKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292
KK T VK+Y+N +FLNS R IR++CE+EE RL+ + +++T+LFFGSAR+ ++ QYD + ++ LA A + + + +A L+KT+W+ ++ D V +++ + ++S Q E + R++ + Y T P +D+ K + +TTGGGPGFMEAAN GA+ VPGA+T+GMGI+LPFE GLNP+V++ LAFEFHYFFTRKFWM+Y C+A+VVAPGG GTLDELFE+LTLKQT K+ P +PVVL KEFW+++++W ALADYGVISQ
Sbjct: 23 KKLTPTVKSYRNMEFLNSYSGRMIRILCEFEEPKQRLQQHFIRTTVLFFGSARSMTQAQYDSTVQDIHSKLAAATEDCTKASLQNELARLKKTQWMCKWVDMVENMARMVAEFS-QKEQDIIN-RSFRHIPDYFRLT----PEDGSESLDDLQKRF--HDLVVTTGGGPGFMEAANHGAASVPGAVTMGMGISLPFEKGLNPHVTKGLAFEFHYFFTRKFWMMYSCRAIVVAPGGFGTLDELFELLTLKQTKKI-PSLPVVLLDKEFWRTVVNWQALADYGVISQ 298
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|731691619|ref|XP_010697382.1| (hypothetical protein LPMP_150040 [Leishmania panamensis] >gi|685202483|gb|AIN96729.1| hypothetical protein LPMP_150040 [Leishmania panamensis] >gi|1099055261|emb|CCM13997.1| hypothetical protein, conserved [Leishmania guyanensis]) HSP 1 Score: 291.967 bits (746), Expect = 4.498e-94 Identity = 145/286 (50.70%), Postives = 201/286 (70.28%), Query Frame = 0
Query: 7 EKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292
+K +K+YKN +FLNS R IR++CE+EE RL+ + ++ST+LFFGSAR+ ++ QYD M L LA A E + + +A L KT+W+ ++ D V L+K + +++ + + + Y + Y R P P +S +D+ K + + +TTGGGPGFMEAAN+GA+ VPGA+T+GMGI+LPFE GLNP+V+E LAFEFHYFFTRKFWM+Y C+A+VVAPGG GTLDE+FE+LTLKQT K+ P +PVVL K+FWK++++W ALADYGVISQ
Sbjct: 22 DKNLIPTIKSYKNMEFLNSYAGRMIRILCEFEEPQQRLQQHFIRSTVLFFGSARSMTQGQYDSTMRGLRSKLAAATEENAKVSIQNELARLEKTQWMCKWVDLVEHLAKMVAEFARKEREIINCSFKY--IPDYF---RLP-PEESSESLDDLHKRFGD--LVVTTGGGPGFMEAANRGAASVPGAVTMGMGISLPFEKGLNPHVTEGLAFEFHYFFTRKFWMMYSCRAIVVAPGGFGTLDEIFELLTLKQTKKI-PSLPVVLLCKQFWKTVVNWQALADYGVISQ 298
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|157866726|ref|XP_001681918.1| (conserved hypothetical protein [Leishmania major strain Friedlin] >gi|68125369|emb|CAJ03228.1| conserved hypothetical protein [Leishmania major strain Friedlin]) HSP 1 Score: 291.582 bits (745), Expect = 5.652e-94 Identity = 139/285 (48.77%), Postives = 202/285 (70.88%), Query Frame = 0
Query: 8 KKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292
+K T +K+Y+N +FLNS R IR++CE+EE RL+ + +++T+LFFGSAR+ ++ QYD + ++ LA A + + + +A L+KT+W+ ++ D V L++ + ++S Q E + R++ + Y T P +D+ K + +TTGGGPGFMEAAN GA VPGA+T+GMGI+LPFE+GLNP+V++ LAFEFHYFFTRKFWM+Y C+A+V+APGG GTLDE+FE+LTLKQT K+ P +PVVL GKEFW+++++W ALA+YGVISQ
Sbjct: 23 QKLTPTIKSYRNMEFLNSYSGRMIRILCEFEEPKQRLQQHFIRTTVLFFGSARSMTQAQYDSTVQDIHSKLAAATDDSTKASLQNKLACLKKTQWMCKWVDVVENLARMVAEFS-QKEQDMI-IRSFRHIPDYFRLT----PEDGSESLDDLQKRF--HDLVVTTGGGPGFMEAANHGAESVPGAVTMGMGISLPFENGLNPHVTKGLAFEFHYFFTRKFWMMYSCRAIVIAPGGFGTLDEMFELLTLKQTKKI-PSLPVVLLGKEFWQTVVNWQALANYGVISQ 298
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|146081777|ref|XP_001464342.1| (conserved hypothetical protein [Leishmania infantum JPCM5] >gi|134068434|emb|CAM66724.1| conserved hypothetical protein [Leishmania infantum JPCM5]) HSP 1 Score: 290.812 bits (743), Expect = 1.062e-93 Identity = 140/285 (49.12%), Postives = 201/285 (70.53%), Query Frame = 0
Query: 8 KKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292
+K T +K+Y+N +FLNS R IR++CE+EE RL+ + +++T+LFFGSAR+ ++ QYD + + LA + + + +A L+KT+W+ ++ D V +L++ + ++S Q E + R++ + Y T P +D+ K + +TTGGGPGFMEAAN GA VPGA+T+GMGI+LPFE+GLNP+V++ LAFEFHYFFTRKFWM+Y C+A+VVAPGG GTLDE+FE+LTLKQT K+ P +PVVL GKEFW+++++W ALADYGVISQ
Sbjct: 23 QKLTPTIKSYRNMEFLNSYSGRMIRILCEFEEPKQRLQQHFIRTTVLFFGSARSMTQAQYDSTVQNIHSKLAAVTDDSTKASLQNELARLKKTQWMCKWVDVVEKLARMVAEFS-QKEQDMI-IRSFRYIPDYFRLT----PEDGSESLDDLQKRF--HDLVVTTGGGPGFMEAANHGAESVPGAVTMGMGISLPFENGLNPHVTKGLAFEFHYFFTRKFWMMYSCRAIVVAPGGFGTLDEMFELLTLKQTKKI-PSLPVVLLGKEFWQTVVNWQALADYGVISQ 298
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|72389050|ref|XP_844820.1| (hypothetical protein [Trypanosoma brucei brucei TREU927] >gi|62176331|gb|AAX70443.1| hypothetical protein, conserved [Trypanosoma brucei] >gi|70801354|gb|AAZ11261.1| hypothetical protein, conserved [Trypanosoma brucei brucei TREU927] >gi|1115872795|emb|SCU69050.1| Possible lysine decarboxylase, putative [Trypanosoma equiperdum]) HSP 1 Score: 290.041 bits (741), Expect = 1.775e-93 Identity = 141/288 (48.96%), Postives = 200/288 (69.44%), Query Frame = 0
Query: 5 APEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292
A ++ AVK+Y N FL S R IR++CE+EE RL+ ++ST+L FGSAR+ ++E++ M V AL A QE+ E + LR EW+ E+ ++VTELSKR+ ++SL+ E +L A +++ + Y + V ++ D D + + +TTGGGPGFMEAANKGAS VPGALT+GMGI+LPFE GLN YV+ LAF FHYFFTRKFWM+Y C+A+V+APGG GT+DE+FE+LTL+QT K+ P+ P+VLF +FWK++++W+ALA++G IS+
Sbjct: 17 AQKRALVPAVKSYNNEAFLRSTQGRLIRILCEFEEPAARLRKNHIRSTVLLFGSARSMTKEEHKAAMESRVTALKSATDPQEKTRIETEMKRLRSIEWMCEWMERVTELSKRIAEFSLK-EKELINA-SFSRLPDYFRPSLSAVNKEA----DVDAEADLFHDLVVTTGGGPGFMEAANKGASSVPGALTMGMGISLPFEAGLNRYVTAGLAFTFHYFFTRKFWMMYSCRAIVIAPGGFGTMDEVFELLTLRQTRKI-PEFPIVLFCTKFWKTVVNWEALAEFGTISK 297
BLAST of EWM27322.1 vs. NCBI_GenBank
Match: gi|398012672|ref|XP_003859529.1| (hypothetical protein, conserved [Leishmania donovani] >gi|322497745|emb|CBZ32821.1| hypothetical protein, conserved [Leishmania donovani]) HSP 1 Score: 289.656 bits (740), Expect = 2.888e-93 Identity = 140/285 (49.12%), Postives = 200/285 (70.18%), Query Frame = 0
Query: 8 KKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292
+K T +K+Y+N +FLNS R IR++CE+EE RL+ + +++T+LFFGSAR+ ++ QYD + + LA + + + +A L+KT+W+ ++ D V +L++ + ++S Q E + R++ + Y T P +D+ K + +TTGGGPGFMEAAN GA VPGA+T+GMGI+LPFE+GLNP+V++ LAFEFHYFFTRKFWM+Y C+A+VVAPGG GTLDE+FE+LTLKQT K+ P +PVVL GKEFW+ +++W ALADYGVISQ
Sbjct: 23 QKLTPTIKSYRNMEFLNSYSGRMIRILCEFEEPKQRLQQHFIRTTVLFFGSARSMTQAQYDSTVQNIHSKLAAVTDDSTKASLQNELARLKKTQWMCKWVDVVEKLARMVAEFS-QKEQDMI-IRSFRYIPDYFRLT----PEDGSESLDDLQKRF--HDLVVTTGGGPGFMEAANHGAESVPGAVTMGMGISLPFENGLNPHVTKGLAFEFHYFFTRKFWMMYSCRAIVVAPGGFGTLDEMFELLTLKQTKKI-PSLPVVLLGKEFWQMVVNWQALADYGVISQ 298 The following BLAST results are available for this feature:
BLAST of EWM27322.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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