EWM27328.1, cds3344 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27328.1 vs. NCBI_GenBank
Match: gi|585109529|gb|EWM27328.1| (hypothetical protein Naga_100393g5 [Nannochloropsis gaditana]) HSP 1 Score: 697.967 bits (1800), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query: 1 MVNRCWTLPMAMAIFAPVLLLGGIPLTNAFLHPLRPAKTDSLLAPSQRHAAISGPMYAQRDVMKMVNPSEWQASWLQRIRSRVSPPVDKPSVSPVPSQKEKKEQTPAKAASTSNSRSSPTVGVKNSDAKVPMPPQQLSRFTAAVIEEESAHASAVEAEKRELKTLKGIPDTFLKDDIVANDNTVRQASAVVGALAGFALGGPLLALVGAAWTSYSCTVTPSDAGEAARGTGKWALNVHNFMAKMNRKHGYVQKLSQGLGGWYRRFRKETAPDATFLDVAESSVQSALEATDQLRKDLDVAGPVEKALIKGGEWSAGGLRSLIRLNEENRVTERLWEVVAKR 341
MVNRCWTLPMAMAIFAPVLLLGGIPLTNAFLHPLRPAKTDSLLAPSQRHAAISGPMYAQRDVMKMVNPSEWQASWLQRIRSRVSPPVDKPSVSPVPSQKEKKEQTPAKAASTSNSRSSPTVGVKNSDAKVPMPPQQLSRFTAAVIEEESAHASAVEAEKRELKTLKGIPDTFLKDDIVANDNTVRQASAVVGALAGFALGGPLLALVGAAWTSYSCTVTPSDAGEAARGTGKWALNVHNFMAKMNRKHGYVQKLSQGLGGWYRRFRKETAPDATFLDVAESSVQSALEATDQLRKDLDVAGPVEKALIKGGEWSAGGLRSLIRLNEENRVTERLWEVVAKR
Sbjct: 1 MVNRCWTLPMAMAIFAPVLLLGGIPLTNAFLHPLRPAKTDSLLAPSQRHAAISGPMYAQRDVMKMVNPSEWQASWLQRIRSRVSPPVDKPSVSPVPSQKEKKEQTPAKAASTSNSRSSPTVGVKNSDAKVPMPPQQLSRFTAAVIEEESAHASAVEAEKRELKTLKGIPDTFLKDDIVANDNTVRQASAVVGALAGFALGGPLLALVGAAWTSYSCTVTPSDAGEAARGTGKWALNVHNFMAKMNRKHGYVQKLSQGLGGWYRRFRKETAPDATFLDVAESSVQSALEATDQLRKDLDVAGPVEKALIKGGEWSAGGLRSLIRLNEENRVTERLWEVVAKR 341
BLAST of EWM27328.1 vs. NCBI_GenBank
Match: gi|585113181|gb|EWM30517.1| (hypothetical protein Naga_100013g33 [Nannochloropsis gaditana]) HSP 1 Score: 75.0998 bits (183), Expect = 4.334e-12 Identity = 44/161 (27.33%), Postives = 81/161 (50.31%), Query Frame = 0
Query: 180 NDNTVRQASAVVGALAGFALGGPLLALVGAAWTSYSCTVTPSDAGEAARGTGKWALNVHNFMAKMNRKHGYVQKLSQGLGGWYRRFRKETAPDATFLDVAESSVQSALEATDQLRKDLDVAGPVEKALIKGGEWSAGGLRSLIRLNEENRVTERLWEVVAK 340
N T+ ++A+VG AG GP+L +V T+Y+ T +D GEAARG GK AL V N++ K+N K+ K+S + ++ D+ + E+ + + +D L ++ D+ + A+ ++S + + LNE+ + ++ + V K
Sbjct: 64 NPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAK-TDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGEDSVVAKLEETFESTKTKLSD-LDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKK 222 The following BLAST results are available for this feature:
BLAST of EWM27328.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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