EWM27340.1, cds3335 (CDS) Nannochloropsis gaditana

Overview
NameEWM27340.1
Unique Namecds3335
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:166555..167287 -
Alignment locationCM002461.1:166003..166376 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27340.1
Productdual specificity protein phosphatase
Orig transcript idgnl|cribi|Naga_100226g13.10110.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:166555..167287 -
CM002461.1supercontigCM002461.1:166003..166376 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004725protein tyrosine phosphatase activity
GO:0016791phosphatase activity
GO:0008138protein tyrosine/serine/threonine phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016311dephosphorylation
GO:0006470protein dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR000387Tyr/Dual-sp_Pase
IPR016130Tyr_Pase_AS
IPR024950DUSP
IPR000340Dual-sp_phosphatase_cat-dom
IPR029021Prot-tyrosine_phosphatase-like
IPR020422Dual-sp_phosphatase_subgr_cat
Homology
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|553189734|ref|XP_005855060.1| (dual specificity phosphatase, partial [Nannochloropsis gaditana CCMP526] >gi|422293996|gb|EKU21296.1| dual specificity phosphatase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 762.681 bits (1968), Expect = 0.000e+0
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query:    1 MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA 368
            MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA
Sbjct:   66 MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA 433          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|585109545|gb|EWM27340.1| (dual specificity protein phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 761.525 bits (1965), Expect = 0.000e+0
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query:    1 MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA 368
            MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA
Sbjct:    1 MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA 368          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|673046199|ref|XP_008877060.1| (hypothetical protein H310_11952 [Aphanomyces invadans] >gi|574467273|gb|ETV94297.1| hypothetical protein H310_11952 [Aphanomyces invadans])

HSP 1 Score: 110.153 bits (274), Expect = 8.385e-25
Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 0
Query:  203 LSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGE-LCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFG 359
            ++ IL  L +GG  V D+L  ++ L I  VVN T +  +   + L YL++   DD   PI    P     I  A+ +G  CLVHC  GMSRS   ++ YL+     MS+LEAL Y R+ R +I+PN+GFM +L++ ER H     S+DL KY ++RF 
Sbjct:   46 VTKILDGLYVGGRGVVDDLMAIQSLGITHVVNCTEDIPNFFDDTLEYLRVPVPDDPESPIDEYFPVVVHFIQNARDKGQTCLVHCSHGMSRSATFILVYLI-ERHGMSVLEALQYTRTLRPVISPNVGFMSKLLDLER-HTHQLCSVDLQKYRKDRFA 201          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|698814950|ref|XP_009840504.1| (hypothetical protein H257_14402 [Aphanomyces astaci] >gi|574104530|gb|ETV70061.1| hypothetical protein H257_14402 [Aphanomyces astaci])

HSP 1 Score: 109.383 bits (272), Expect = 1.208e-24
Identity = 64/162 (39.51%), Postives = 94/162 (58.02%), Query Frame = 0
Query:  203 LSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTE----GDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWE-REHRGGKVSLDLSKYEENRFG 359
            ++ +L  L +GG  ++D+L  M+ L I  VVN T +     DDS+    YL++   DD    I          I  A+  G  CLVHC +GMSRS   V+ YL+    DMS+LEAL Y R+ R +I+PN+GFMG+L++ E R H+  + S+DL KY ++R+ 
Sbjct:   25 ITKVLDGLYVGGRGIADDLLAMQSLAITHVVNCTQDIPCYYDDSLE---YLRVPLTDDPDTAIEAHFEIVVKFIHDAREMGQTCLVHCSRGMSRSATFVLVYLV-ERHDMSVLEALQYTRALRPVISPNVGFMGKLLDLEQRLHQ--RCSVDLHKYRKDRYA 180          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|1173944250|gb|OQR93011.1| (dual specificity protein phosphatase 2-like [Achlya hypogyna])

HSP 1 Score: 108.997 bits (271), Expect = 1.245e-24
Identity = 71/187 (37.97%), Postives = 106/187 (56.68%), Query Frame = 0
Query:  178 GGESGISARG-RRPRPLAIPTDSHFHLSTIL--GHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGE-LCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWE-REHRGGKVSLDLSKYEENRFG 359
              E  I A   ++PR  +I + S  H +T L  G L IGG++  ++L  +  + +  +VN T E  D   E + YL++   D+    I      A + I+ A      CLVHC  GMSRS  +V+AYL+ S++ M LLEAL Y R+RR +++PN+GFM +LVE E + H     SLDL +Y+++RF 
Sbjct:    4 ASEGAIEASAPKKPRLSSIRSLSIQHNATQLLDGLLFIGGNDCVNDLPALLSMGVTHIVNCTRETPDYFPEHVEYLRVAVTDEPEVAIDAFFDEACSFINKAVDNKRACLVHCSHGMSRSATIVLAYLI-SHRGMQLLEALDYLRARRRVVSPNVGFMQRLVELEIKVHHAA--SLDLQEYKKDRFA 187          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|585104744|gb|EWM23603.1| (dual specificity protein phosphatase 10 [Nannochloropsis gaditana] >gi|585104745|gb|EWM23604.1| dual specificity protein phosphatase 10 [Nannochloropsis gaditana])

HSP 1 Score: 111.694 bits (278), Expect = 2.809e-23
Identity = 71/184 (38.59%), Postives = 98/184 (53.26%), Query Frame = 0
Query:  192 PLAIPT-DSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEG-----DDSMGELCYLKLNWRDDIAQPILP-DLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRG-GKVSLDLSKYEENRFGDTAMLLCG 367
            P+A+ T D H+  S IL +L +GG+ +     +    NI  +VNTT +        S G+ C L L   D +++ +    +  AF  ID A+A G  CLVHC+ GMSRS +VV+AYLM   K M LLEA  + R RR   +PN  FM QL  +ER   G    +LD+  Y ++RF     L  G
Sbjct:  323 PMALSTMDFHYDGSKILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFL--LDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFK-MPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAVG 503          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|1173937982|gb|OQR88495.1| (carbohydrate-binding protein [Thraustotheca clavata])

HSP 1 Score: 108.227 bits (269), Expect = 4.102e-22
Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = 0
Query:  188 RRPRPLAIPTDSHFHLSTIL--GHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGE-LCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFG---DTAML 364
            ++PR  AI + S  H +T L  G L IGG++  ++L V++ ++I  +VN T E  +   E   YL++   DD    I          I  A      C+VHC  GMSRS  +V+AYLM   K+M+LL+ALTY RS R +++PN+GFM QL+  E        SLDL +Y+++RF    D AM+
Sbjct:   19 KKPRLGAIRSLSIQHNATKLLDGLLYIGGNDCVNDLLVLQTMDITHIVNCTRETPNYFTEHFEYLQIPINDDPDVNIDMYFEEICTFIHKAIENKMACMVHCSHGMSRSATIVLAYLM-QYKEMTLLQALTYLRSLRRVVSPNIGFMQQLLTLELSIYQVN-SLDLQEYKKDRFAPVQDLAMV 199          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|514693262|ref|XP_004994203.1| (dual specificity phosphatase 6 [Salpingoeca rosetta] >gi|326427602|gb|EGD73172.1| dual specificity phosphatase 6 [Salpingoeca rosetta])

HSP 1 Score: 104.76 bits (260), Expect = 2.622e-21
Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 0
Query:  203 LSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMG---ELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWE 338
            +S +  +L IG    + NL +++   I  ++N T + D++     +  YL++   D   Q +    P AF+ ID A+  G   LVHCK G+SRS A+V+ YLMYS K M+L EA    RS+R II+PN+ FMG+L E+E
Sbjct:  300 ISRVRDYLFIGAQRDACNLALLQTHGITRIINVTRDCDNAFEKNPQFRYLQIRISDTWNQKLQEKFPSAFSFIDEARRAGERVLVHCKAGVSRSAAIVIGYLMYSEK-MTLDEAHVEVRSKRDIISPNLDFMGELKEYE 437          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|844865071|ref|XP_012799002.1| (Dual specificity protein phosphatase Mpk3 [Schistosoma haematobium] >gi|685964206|gb|KGB39242.1| Dual specificity protein phosphatase Mpk3 [Schistosoma haematobium])

HSP 1 Score: 104.375 bits (259), Expect = 3.003e-21
Identity = 54/159 (33.96%), Postives = 90/159 (56.60%), Query Frame = 0
Query:  203 LSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSM-------GELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYE 354
            +S IL  L +G    S ++ ++RQLN+  ++N T    DS+         + YL +   D   Q +LP   RA   I+ A+   G+ LVHC  G+SRS AVV+AYL+Y+N+ +++ +AL + ++RR++  PN+ FMGQL  +  +    K ++   K+ 
Sbjct:  154 ISQILPFLYLGNARDSQDVDLIRQLNVTHIINVT----DSLPMPFRKLNRIQYLHIPASDTTKQNLLPSFDRAVQFIEKARKHNGIVLVHCLAGVSRSVAVVIAYLLYNNRGLNVYKALEFVQARRSVAGPNLHFMGQLQAYYHDLHSRKSNIFTDKFN 308          
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|813126792|ref|XP_012197139.1| (hypothetical protein SPRG_03157 [Saprolegnia parasitica CBS 223.65] >gi|641538107|gb|KDO31941.1| hypothetical protein SPRG_03157 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 99.7525 bits (247), Expect = 4.311e-21
Identity = 70/185 (37.84%), Postives = 100/185 (54.05%), Query Frame = 0
Query:  178 GGESGISARGRRPRPLAIPTDSHFHLSTIL--GHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSM-GELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFG 359
             GES +  +  +PR  AI + S  H +T L  G L IGG++  ++L V+  ++I  VVN T E  +     + YL++   D+    I      A A I  A      C+VHC  GMSRS  +V+AYL+   K M LL+AL Y RS R +++PN+GFM +L+E E        SLDL  Y ++RF 
Sbjct:    8 SGESDVVPK--KPRLSAIRSLSIQHNATRLLDGLLYIGGNDCVNDLDVLGTMDISHVVNCTRETPNYFPDRVEYLRVPITDEPEMEIDMYFDDACAFIHKAVENHMACMVHCSHGMSRSATIVLAYLVKIRK-MRLLDALQYLRSLRRVVSPNIGFMQRLLELEMAVHDAN-SLDLQAYTKDRFA 188          
The following BLAST results are available for this feature:
BLAST of EWM27340.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553189734|ref|XP_005855060.1|0.000e+0100.00dual specificity phosphatase, partial [Nannochloro... [more]
gi|585109545|gb|EWM27340.1|0.000e+0100.00dual specificity protein phosphatase [Nannochlorop... [more]
gi|673046199|ref|XP_008877060.1|8.385e-2539.87hypothetical protein H310_11952 [Aphanomyces invad... [more]
gi|698814950|ref|XP_009840504.1|1.208e-2439.51hypothetical protein H257_14402 [Aphanomyces astac... [more]
gi|1173944250|gb|OQR93011.1|1.245e-2437.97dual specificity protein phosphatase 2-like [Achly... [more]
gi|585104744|gb|EWM23603.1|2.809e-2338.59dual specificity protein phosphatase 10 [Nannochlo... [more]
gi|1173937982|gb|OQR88495.1|4.102e-2238.80carbohydrate-binding protein [Thraustotheca clavat... [more]
gi|514693262|ref|XP_004994203.1|2.622e-2139.57dual specificity phosphatase 6 [Salpingoeca rosett... [more]
gi|844865071|ref|XP_012799002.1|3.003e-2133.96Dual specificity protein phosphatase Mpk3 [Schisto... [more]
gi|813126792|ref|XP_012197139.1|4.311e-2137.84hypothetical protein SPRG_03157 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3344rna3344Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications