EWM27340.1, cds3335 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|553189734|ref|XP_005855060.1| (dual specificity phosphatase, partial [Nannochloropsis gaditana CCMP526] >gi|422293996|gb|EKU21296.1| dual specificity phosphatase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 762.681 bits (1968), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query: 1 MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA 368
MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA
Sbjct: 66 MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA 433
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|585109545|gb|EWM27340.1| (dual specificity protein phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 761.525 bits (1965), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query: 1 MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA 368
MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA
Sbjct: 1 MGCVQSKSSLFIGPHADEDSLPKPGKERMMEGEAPSSAFTGNAQSELPCQAENNSVHQREGNSRSLPTTWSTSSPRASTPGDCLLSPRLAAVAEHAAASVDPGPHKESHVHGKVVKKRTLPVPFSAKGWLAFPAQAPINSGPRRPATNPTPTSNHDVLLNASLTQSQGIVVALTKTTGGESGISARGRRPRPLAIPTDSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFGDTAMLLCGA 368
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|673046199|ref|XP_008877060.1| (hypothetical protein H310_11952 [Aphanomyces invadans] >gi|574467273|gb|ETV94297.1| hypothetical protein H310_11952 [Aphanomyces invadans]) HSP 1 Score: 110.153 bits (274), Expect = 8.385e-25 Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 203 LSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGE-LCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFG 359
++ IL L +GG V D+L ++ L I VVN T + + + L YL++ DD PI P I A+ +G CLVHC GMSRS ++ YL+ MS+LEAL Y R+ R +I+PN+GFM +L++ ER H S+DL KY ++RF
Sbjct: 46 VTKILDGLYVGGRGVVDDLMAIQSLGITHVVNCTEDIPNFFDDTLEYLRVPVPDDPESPIDEYFPVVVHFIQNARDKGQTCLVHCSHGMSRSATFILVYLI-ERHGMSVLEALQYTRTLRPVISPNVGFMSKLLDLER-HTHQLCSVDLQKYRKDRFA 201
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|698814950|ref|XP_009840504.1| (hypothetical protein H257_14402 [Aphanomyces astaci] >gi|574104530|gb|ETV70061.1| hypothetical protein H257_14402 [Aphanomyces astaci]) HSP 1 Score: 109.383 bits (272), Expect = 1.208e-24 Identity = 64/162 (39.51%), Postives = 94/162 (58.02%), Query Frame = 0
Query: 203 LSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTE----GDDSMGELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWE-REHRGGKVSLDLSKYEENRFG 359
++ +L L +GG ++D+L M+ L I VVN T + DDS+ YL++ DD I I A+ G CLVHC +GMSRS V+ YL+ DMS+LEAL Y R+ R +I+PN+GFMG+L++ E R H+ + S+DL KY ++R+
Sbjct: 25 ITKVLDGLYVGGRGIADDLLAMQSLAITHVVNCTQDIPCYYDDSLE---YLRVPLTDDPDTAIEAHFEIVVKFIHDAREMGQTCLVHCSRGMSRSATFVLVYLV-ERHDMSVLEALQYTRALRPVISPNVGFMGKLLDLEQRLHQ--RCSVDLHKYRKDRYA 180
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|1173944250|gb|OQR93011.1| (dual specificity protein phosphatase 2-like [Achlya hypogyna]) HSP 1 Score: 108.997 bits (271), Expect = 1.245e-24 Identity = 71/187 (37.97%), Postives = 106/187 (56.68%), Query Frame = 0
Query: 178 GGESGISARG-RRPRPLAIPTDSHFHLSTIL--GHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGE-LCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWE-REHRGGKVSLDLSKYEENRFG 359
E I A ++PR +I + S H +T L G L IGG++ ++L + + + +VN T E D E + YL++ D+ I A + I+ A CLVHC GMSRS +V+AYL+ S++ M LLEAL Y R+RR +++PN+GFM +LVE E + H SLDL +Y+++RF
Sbjct: 4 ASEGAIEASAPKKPRLSSIRSLSIQHNATQLLDGLLFIGGNDCVNDLPALLSMGVTHIVNCTRETPDYFPEHVEYLRVAVTDEPEVAIDAFFDEACSFINKAVDNKRACLVHCSHGMSRSATIVLAYLI-SHRGMQLLEALDYLRARRRVVSPNVGFMQRLVELEIKVHHAA--SLDLQEYKKDRFA 187
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|585104744|gb|EWM23603.1| (dual specificity protein phosphatase 10 [Nannochloropsis gaditana] >gi|585104745|gb|EWM23604.1| dual specificity protein phosphatase 10 [Nannochloropsis gaditana]) HSP 1 Score: 111.694 bits (278), Expect = 2.809e-23 Identity = 71/184 (38.59%), Postives = 98/184 (53.26%), Query Frame = 0
Query: 192 PLAIPT-DSHFHLSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEG-----DDSMGELCYLKLNWRDDIAQPILP-DLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRG-GKVSLDLSKYEENRFGDTAMLLCG 367
P+A+ T D H+ S IL +L +GG+ + + NI +VNTT + S G+ C L L D +++ + + AF ID A+A G CLVHC+ GMSRS +VV+AYLM K M LLEA + R RR +PN FM QL +ER G +LD+ Y ++RF L G
Sbjct: 323 PMALSTMDFHYDGSKILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFL--LDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFK-MPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAVG 503
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|1173937982|gb|OQR88495.1| (carbohydrate-binding protein [Thraustotheca clavata]) HSP 1 Score: 108.227 bits (269), Expect = 4.102e-22 Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = 0
Query: 188 RRPRPLAIPTDSHFHLSTIL--GHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMGE-LCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFG---DTAML 364
++PR AI + S H +T L G L IGG++ ++L V++ ++I +VN T E + E YL++ DD I I A C+VHC GMSRS +V+AYLM K+M+LL+ALTY RS R +++PN+GFM QL+ E SLDL +Y+++RF D AM+
Sbjct: 19 KKPRLGAIRSLSIQHNATKLLDGLLYIGGNDCVNDLLVLQTMDITHIVNCTRETPNYFTEHFEYLQIPINDDPDVNIDMYFEEICTFIHKAIENKMACMVHCSHGMSRSATIVLAYLM-QYKEMTLLQALTYLRSLRRVVSPNIGFMQQLLTLELSIYQVN-SLDLQEYKKDRFAPVQDLAMV 199
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|514693262|ref|XP_004994203.1| (dual specificity phosphatase 6 [Salpingoeca rosetta] >gi|326427602|gb|EGD73172.1| dual specificity phosphatase 6 [Salpingoeca rosetta]) HSP 1 Score: 104.76 bits (260), Expect = 2.622e-21 Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 0
Query: 203 LSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSMG---ELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWE 338
+S + +L IG + NL +++ I ++N T + D++ + YL++ D Q + P AF+ ID A+ G LVHCK G+SRS A+V+ YLMYS K M+L EA RS+R II+PN+ FMG+L E+E
Sbjct: 300 ISRVRDYLFIGAQRDACNLALLQTHGITRIINVTRDCDNAFEKNPQFRYLQIRISDTWNQKLQEKFPSAFSFIDEARRAGERVLVHCKAGVSRSAAIVIGYLMYSEK-MTLDEAHVEVRSKRDIISPNLDFMGELKEYE 437
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|844865071|ref|XP_012799002.1| (Dual specificity protein phosphatase Mpk3 [Schistosoma haematobium] >gi|685964206|gb|KGB39242.1| Dual specificity protein phosphatase Mpk3 [Schistosoma haematobium]) HSP 1 Score: 104.375 bits (259), Expect = 3.003e-21 Identity = 54/159 (33.96%), Postives = 90/159 (56.60%), Query Frame = 0
Query: 203 LSTILGHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSM-------GELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYE 354
+S IL L +G S ++ ++RQLN+ ++N T DS+ + YL + D Q +LP RA I+ A+ G+ LVHC G+SRS AVV+AYL+Y+N+ +++ +AL + ++RR++ PN+ FMGQL + + K ++ K+
Sbjct: 154 ISQILPFLYLGNARDSQDVDLIRQLNVTHIINVT----DSLPMPFRKLNRIQYLHIPASDTTKQNLLPSFDRAVQFIEKARKHNGIVLVHCLAGVSRSVAVVIAYLLYNNRGLNVYKALEFVQARRSVAGPNLHFMGQLQAYYHDLHSRKSNIFTDKFN 308
BLAST of EWM27340.1 vs. NCBI_GenBank
Match: gi|813126792|ref|XP_012197139.1| (hypothetical protein SPRG_03157 [Saprolegnia parasitica CBS 223.65] >gi|641538107|gb|KDO31941.1| hypothetical protein SPRG_03157 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 99.7525 bits (247), Expect = 4.311e-21 Identity = 70/185 (37.84%), Postives = 100/185 (54.05%), Query Frame = 0
Query: 178 GGESGISARGRRPRPLAIPTDSHFHLSTIL--GHLLIGGDEVSDNLTVMRQLNIKSVVNTTTEGDDSM-GELCYLKLNWRDDIAQPILPDLPRAFAAIDAAKAQGGLCLVHCKKGMSRSGAVVVAYLMYSNKDMSLLEALTYARSRRAIIAPNMGFMGQLVEWEREHRGGKVSLDLSKYEENRFG 359
GES + + +PR AI + S H +T L G L IGG++ ++L V+ ++I VVN T E + + YL++ D+ I A A I A C+VHC GMSRS +V+AYL+ K M LL+AL Y RS R +++PN+GFM +L+E E SLDL Y ++RF
Sbjct: 8 SGESDVVPK--KPRLSAIRSLSIQHNATRLLDGLLYIGGNDCVNDLDVLGTMDISHVVNCTRETPNYFPDRVEYLRVPITDEPEMEIDMYFDDACAFIHKAVENHMACMVHCSHGMSRSATIVLAYLVKIRK-MRLLDALQYLRSLRRVVSPNIGFMQRLLELEMAVHDAN-SLDLQAYTKDRFA 188 The following BLAST results are available for this feature:
BLAST of EWM27340.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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