EWM27338.1, cds3331 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|585109543|gb|EWM27338.1| (Thioesterase superfamily [Nannochloropsis gaditana]) HSP 1 Score: 694.115 bits (1790), Expect = 0.000e+0 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query: 1 MRARPSLIAALKQSSRHEDALEFTQLFHSINFAHTLRVSDAVLERYDAKKGLETTHEITKYLCRTDEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAFTPLLYPIVRKSLLGLTRRHVATGERVNTHDASSIFDHFPLDNLTLENESDKGDERQRLQATRASLHVKPRHCNGLFKMHGGALAVAAEEIALLDVAARKKESTSQAPRARALSLHYLQANDRVVDLAAWTLQDACEKSGGEEGGDDGLLTQIEVRRGGKLCNSGSIIWQ 337
MRARPSLIAALKQSSRHEDALEFTQLFHSINFAHTLRVSDAVLERYDAKKGLETTHEITKYLCRTDEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAFTPLLYPIVRKSLLGLTRRHVATGERVNTHDASSIFDHFPLDNLTLENESDKGDERQRLQATRASLHVKPRHCNGLFKMHGGALAVAAEEIALLDVAARKKESTSQAPRARALSLHYLQANDRVVDLAAWTLQDACEKSGGEEGGDDGLLTQIEVRRGGKLCNSGSIIWQ
Sbjct: 1 MRARPSLIAALKQSSRHEDALEFTQLFHSINFAHTLRVSDAVLERYDAKKGLETTHEITKYLCRTDEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAFTPLLYPIVRKSLLGLTRRHVATGERVNTHDASSIFDHFPLDNLTLENESDKGDERQRLQATRASLHVKPRHCNGLFKMHGGALAVAAEEIALLDVAARKKESTSQAPRARALSLHYLQANDRVVDLAAWTLQDACEKSGGEEGGDDGLLTQIEVRRGGKLCNSGSIIWQ 337
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|585111305|gb|EWM28873.1| (acyl-coenzyme a thioesterase 13 [Nannochloropsis gaditana]) HSP 1 Score: 85.8853 bits (211), Expect = 5.437e-15 Identity = 82/281 (29.18%), Postives = 122/281 (43.42%), Query Frame = 0
Query: 58 ITKYLC-RTDEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAF----TPLLYPIVRKSLLGLTRRHVATGE-------------RVNTHDASSIFDHFPLDNLTLENESDKGDERQRLQAT-------RASLHVKPRHCNGLFKMHGGALAVAAEEIALLDV--AARKKESTSQ--APRARALSLHYLQANDRVVDLAAWTLQDACEKSGGE 309
+ +LC + L AG +TA FDE+S+ A + D HRPGVSV+L+ V++ + G + +++ KIG++L F + L D A+ + +A G+H K+L M W +A PL Y + LL R+ R A +I LDN + + A+ AS V P+ CN +HGGA A+ AE AL AAR SQ PR R+LS+ Y+ + +L E+ GE
Sbjct: 73 VPSHLCDNYNNNHRLLDAGAVTAWFDEVSSWAFVSADGRHRPGVSVSLNTTVLSWVPVGTEVEIQSHCKKIGETLGFADMMLLDVATGKELAHGRHVKFLKMGTA--WTVAMHAWAFPLTYLMASAVLLPSVRQRTQKSSSFPPEMAPSPDLPRTEPGSAVNINRLLALDNFHVYEPAGAASPPLAFPASVPLTMEASASFRVIPQVCNSFGSLHGGAAAILAERAALALYHQAARWAGERSQHALPRVRSLSIDYMSPCKKNTELLLLVRGMRVERGAGE 351
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|553183577|ref|XP_005853925.1| (thioesterase superfamily member 2 [Nannochloropsis gaditana CCMP526] >gi|422295137|gb|EKU22436.1| thioesterase superfamily member 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 74.3294 bits (181), Expect = 1.160e-11 Identity = 41/119 (34.45%), Postives = 67/119 (56.30%), Query Frame = 0
Query: 58 ITKYLC-RTDEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAFTPLLYPI 175
+ +LC D L AG +TA FDE+S+ A + D HRPGVSV+L+ V++ + G + +++ KIG++L F + L D A+ + +A G+H K+L M W +A +P+
Sbjct: 73 VPSHLCDNYDNNHCLLDAGAVTAWFDEVSSWAFVSADGRHRPGVSVSLNTTVLSWVPVGTEVEIQSHCKKIGETLGFADMMLLDVATGKELAHGRHVKFLKMGTA--WTVAMHAWAFPL 189
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|909569114|ref|XP_013140041.1| (PREDICTED: acyl-coenzyme A thioesterase 13-like isoform X2 [Papilio polytes]) HSP 1 Score: 71.633 bits (174), Expect = 1.245e-11 Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 0
Query: 66 DEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYL 156
+EGGT L G I + D +ST A + D++ G+SV L V MA ++ G L ++ A K+G +AFL + +R+ +DQL+A G+H KY+
Sbjct: 51 NEGGT-LHGGFIAHMVDTLSTFALLANDKSVGRGLSVDLSVSYMATVSEGDKLEIEAVAKKVGNKIAFLEVQIRNKENDQLIAKGRHIKYV 140
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|1210511431|dbj|GAX29506.1| (hypothetical protein FisN_3Hh024 [Fistulifera solaris]) HSP 1 Score: 65.855 bits (159), Expect = 1.727e-8 Identity = 55/210 (26.19%), Postives = 97/210 (46.19%), Query Frame = 0
Query: 79 AIFDEISTAACILQDRTHRPGVSVALDVEVMANITPG-RSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAFTPLLYPIVRKSLLGLTRRH--VATGERVNTHDASSIFDHFPLDNLTLENESDKGDERQRLQATRASLHVKPRHCNGLFKMHGGALAVAAEEIALLDVAARKKESTSQAPRARALSLHYL 285
AI D+++T + + D RPGVSV +++E ++ L + K+G++L F ++RDAA+++++ G H K+LPM + + + + +P+++ GL+ V+ ER++ H+ S FD S VKP H + +HGG AV E A+ EST +++S+ YL
Sbjct: 80 AIMDDLTTYSLMTVDGG-RPGVSVFMNMETTGSLLSSVERLAITARTRKVGRNLGFTSAEIRDAATNRMICHGSHIKFLPMGFLADYLLQYG---WPVIQW-WYGLSHFQPPVSAKERLSLHEVMSSFD-----------------------TNTGSFRVKPHHASLGGPIHGGCQAVLMEM-----AASTAAESTLPGCYLQSISIEYL 256
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|675857176|ref|XP_009014148.1| (hypothetical protein HELRODRAFT_75909 [Helobdella robusta] >gi|555704304|gb|ESO07537.1| hypothetical protein HELRODRAFT_75909 [Helobdella robusta]) HSP 1 Score: 62.003 bits (149), Expect = 3.567e-8 Identity = 39/122 (31.97%), Postives = 63/122 (51.64%), Query Frame = 0
Query: 40 DAVLERYDAKKGLETTHEITKYLCRTDEG------GTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKY 155
D VL++ K+ E + +C G G L G+ + D +STAA ++ PGVSV ++V M G L + + K+GK+LAFL ++++D AS++L+A G H K+
Sbjct: 21 DKVLQKLVVKEATEG-----RCVCELKVGDEHTNRGKTLHGGMTATLVDMVSTAA-LMTKENMGPGVSVNINVSYMQPAFIGNDLIIDSSVIKLGKTLAFLSVEIKDKASNKLIATGSHTKF 136
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|551559290|ref|XP_005766582.1| (hypothetical protein EMIHUDRAFT_212187 [Emiliania huxleyi CCMP1516] >gi|485616900|gb|EOD14153.1| hypothetical protein EMIHUDRAFT_212187 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 64.3142 bits (155), Expect = 5.510e-8 Identity = 66/224 (29.46%), Postives = 98/224 (43.75%), Query Frame = 0
Query: 79 AIFDEISTAACILQ-DRTHRPGVSVALDVEVMAN--ITPGRSLRLKTWADKIGKSLAFLRLDL--RDAASDQLVAVGKHCKYLPMAGV-----PFWDMAFTPLLYPIVRKSLLG-LTRRHVATGERVNTHDASSIFDHFPLDNLTLENESDKGDERQRLQ----ATRASLHVKPRHCNGLFKMHGGALAVAAEEIALLDVAARKKESTSQAPRARALSLHYLQA 287
A+ DEIST + D HRPGVS++L ++ + G++L T K+G++L +L L++ D L+AVG+HCK L G + P +YP+V+ L R +A T A D FP L S G L + S + P N + +HGGA + E+ A A R ++AP ARA ++ L A
Sbjct: 76 ALHDEISTYGGMAPWDARHRPGVSISLSGRLVGSALCDAGKALHFVTRPLKLGRTLGYLELEIWSGDGEPRDLLAVGRHCKALKFPGSSAALGSLLQLGGHPAVYPLVQPIAYNWLASRPIAPPPLQPTRRA----DLFP----PLAALSASGGVSSLLPDAAFSCDYSTPLSPALANMIGSLHGGAACILGEQAA--STALRDSLGLAEAPPARAFAVQLLSA 289
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|909569112|ref|XP_013140040.1| (PREDICTED: acyl-coenzyme A thioesterase 13-like isoform X1 [Papilio polytes]) HSP 1 Score: 62.003 bits (149), Expect = 9.433e-8 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 0
Query: 66 DEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVG 150
+EGGT L G I + D +ST A + D++ G+SV L V MA ++ G L ++ A K+G +AFL + +R+ +DQL+A G
Sbjct: 51 NEGGT-LHGGFIAHMVDTLSTFALLANDKSVGRGLSVDLSVSYMATVSEGDKLEIEAVAKKVGNKIAFLEVQIRNKENDQLIAKG 134
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|1199394753|ref|XP_021192508.1| (acyl-coenzyme A thioesterase 13-like [Helicoverpa armigera]) HSP 1 Score: 59.6918 bits (143), Expect = 1.959e-7 Identity = 29/87 (33.33%), Postives = 49/87 (56.32%), Query Frame = 0
Query: 72 LSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPM 158
L G I + D +ST A ++ GVSV L+V M+ G ++ ++ KIGK +AFL + +++ +QL+A G+H KY+ +
Sbjct: 56 LHGGFIAHLVDAVSTYALTTNEKVDTRGVSVELNVSYMSAAREGDNVEVEAITKKIGKKIAFLEVQVKNKDKNQLLATGRHTKYIGI 142
BLAST of EWM27338.1 vs. NCBI_GenBank
Match: gi|551633755|ref|XP_005819729.1| (hypothetical protein GUITHDRAFT_148387 [Guillardia theta CCMP2712] >gi|428163691|gb|EKX32749.1| hypothetical protein GUITHDRAFT_148387 [Guillardia theta CCMP2712]) HSP 1 Score: 62.003 bits (149), Expect = 2.906e-7 Identity = 78/284 (27.46%), Postives = 119/284 (41.90%), Query Frame = 0
Query: 58 ITKYLCRTDEGGTYLSAGVITAIFDEIST-AACILQDRTHRPGVSVALDVEV--MANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAFTPLLYPIVRKSLLGLTRRHVATGERVNTHDASSIFDHFPLDNLTLENESDKGDERQRLQATRASLHVKPRHCNGLFKMHGGALAVAAEEIALLDVAARKKESTSQAPRARALSLHYLQA-NDRVVDLAAWTLQDA-CEKSGGEEGGDDGLLTQIEVRRGGKLCNSGSIIW 336
+ + C D G LSA +TA+FDEIST A C DR+ R G+SV L ++ G L T KIGK+L F+ ++ A L + +H K++PM F+ PL+ P L +RV S + FPL NL E S D + RH L +HGGA + +A A +++ T P R++S + + + RV L+ + C SG + + + +++ GK+ SI W
Sbjct: 51 VPSWSCNPD-GRVCLSA--VTAMFDEISTVAGCAAWDRSMRTGLSVQLFSRAHRSLDVGSGDKLVFTTKLRKIGKTLGFVDGEVATEAGVTLANM-RHIKFMPMGS--FYAFIAHPLMQPTTLAVLNAFLSLRPLQHDRV----PQSKEELFPLRNLRTEGSSSFADT-----------SITDRHATALGGIHGGAGVMLLTRMA---AAGAERDLTLPIP-IRSISTNLINSVPTRVGRETEVQLESSLCLGSGLPD------YSYVMIKKEGKIMMDSSIFW 303 The following BLAST results are available for this feature:
BLAST of EWM27338.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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