EWM27358.1, cds3316 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|585109573|gb|EWM27358.1| (Protein of unknown function DUF962 [Nannochloropsis gaditana]) HSP 1 Score: 474.552 bits (1220), Expect = 2.632e-169 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MAPKKAGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKKLHKSIAARVQEEISAYKIQREISSGKGRVTRSKSKKA 233
MAPKKAGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKKLHKSIAARVQEEISAYKIQREISSGKGRVTRSKSKKA
Sbjct: 1 MAPKKAGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKKLHKSIAARVQEEISAYKIQREISSGKGRVTRSKSKKA 233
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|553194116|ref|XP_005855891.1| (hypothetical protein NGA_0557000, partial [Nannochloropsis gaditana CCMP526] >gi|422293167|gb|EKU20467.1| hypothetical protein NGA_0557000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 300.827 bits (769), Expect = 1.534e-101 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MAPKKAGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATH 147
MAPKKAGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATH
Sbjct: 1 MAPKKAGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATH 147
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|695446256|ref|XP_009534435.1| (hypothetical protein PHYSODRAFT_305059 [Phytophthora sojae] >gi|348669752|gb|EGZ09574.1| hypothetical protein PHYSODRAFT_305059 [Phytophthora sojae]) HSP 1 Score: 144.436 bits (363), Expect = 1.222e-39 Identity = 80/213 (37.56%), Postives = 121/213 (56.81%), Query Frame = 0
Query: 6 AGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKKLHKSIAARVQEEISAYKIQREI 218
A D+EKQ TFY +YHDN +N++IH+ CIWP+ +GLM+L + S SSL G LN++ + A VY+A+Y++L+ G GI +A V YFVA G ++ + AALA H W+ QFIGHG+FE R PALF +L QA + AP+FVLLE++F LG + +L++ + +V+ + ++ + +
Sbjct: 5 ADRFDLEKQVTFYLSYHDNKMNQYIHLACIWPIFVSGLMILAHTQPLAETPSFVSSLP----YGEYAVLNYSAVMAAVYMAWYVALDVYAGS--LGAGIISACFVGANYFVAE------------GASALGVHSMHAALAVHATAWILQFIGHGVFERRKPALFDSLDQALITAPMFVLLEILFPLGYRPELYQRVMKQVRINVKNFQATKTL 199
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|1214705287|gb|OWZ17009.1| (hypothetical protein PHMEG_0009114 [Phytophthora megakarya]) HSP 1 Score: 139.043 bits (349), Expect = 1.608e-37 Identity = 74/213 (34.74%), Postives = 122/213 (57.28%), Query Frame = 0
Query: 6 AGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKKLHKSIAARVQEEISAYKIQREI 218
A D+EKQ TFY +YHDN +N++IH+ CIWP+ +GLM+L +V SL SSL G + LN++ + A +Y+ +Y++L+ G AA++++ + + V G ++++ ALA H W+ QFIGHG+FE R PALF +L QA + AP+FVLLE++F LG + L++ + +V+ + ++ + +
Sbjct: 5 ADRFDLEKQVTFYLSYHDNKINQYIHLACIWPIFVSGLMILAHTQPLVETPSLLSSLP----YGEFVLLNYSAVMAGIYMLWYMALDIYA-------GTLGAAIISLCFVFSNYFVV-------EGASAMDVHSMHVALAIHATAWILQFIGHGVFERRKPALFDSLDQAIITAPMFVLLEILFPLGYRPDLYQHVMKQVRINVKNFQATKTL 199
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|1061477523|gb|ODM95244.1| (hypothetical protein Ocin01_11427 [Orchesella cincta]) HSP 1 Score: 138.272 bits (347), Expect = 3.001e-37 Identity = 88/222 (39.64%), Postives = 126/222 (56.76%), Query Frame = 0
Query: 7 GLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYR----QAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKKLHKSIAARVQEEISAYKIQREISSGKGR 224
G+ D+E+QFTFYA+YH VN+ IHIVC+WP+++T L+ I + IS P N+ AL A Y A Y+ ++ KK L AAL+ ++ + R L + EI+Y Q A+ H +CW+AQF+GHG+FEGRAPAL N+ QAF+MAP FVLLEV+F LG +K + + V++E++ K Q++I GK R
Sbjct: 2 GITDLEEQFTFYASYHHAFVNQLIHIVCVWPILWTALVFT-QYIPIEAPISTPVHPANI-----------ALFTALFYAAVYVVMD----KKAGSL----AALLVLICLITSRRFYL----------TAEISYGVPAWQLAVLIHVVCWIAQFVGHGVFEGRAPALLDNVTQAFVMAPFFVLLEVLFHLGYRKDMQVKLWKNVEKELARLK-QKKI--GKSR 190
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|674865757|emb|CDY67529.1| (BnaA08g31290D [Brassica napus]) HSP 1 Score: 138.272 bits (347), Expect = 3.775e-37 Identity = 87/223 (39.01%), Postives = 125/223 (56.05%), Query Frame = 0
Query: 7 GLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGI--VSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVA--LPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKK---LHKSIAARVQEEISAYKIQREISSGK 222
GLLD+EK F FY AYH N +N IHI+ +WP++FT L+LL+ + I +SQ+ P S+T + GV L L+ + Y FY+ L+ K +G F AAL+ +V ++A L P A + LA+ +CW QF+GHGLFE RAPAL NL QAFLMAP FVLLE++ L+ G + + A+V+ I ++ +++I K
Sbjct: 3 GLLDLEKHFAFYGAYHSNPINVVIHIIFVWPIVFTALLLLYPASPIYDLSQLGFPQSMT---LDGV-LRLDVGFVVTVAYALFYICLD-----KKSG---FVAALMCFACWVGSSVLADRLGPSLAV-----------KVGLASQLLCWTGQFLGHGLFEKRAPALLDNLAQAFLMAPFFVLLEILQLVFGYEPYPGFQARVNAKVESSIKEWREKKQIKKNK 202
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|565495966|ref|XP_006305622.1| (hypothetical protein CARUB_v10010309mg [Capsella rubella] >gi|482574333|gb|EOA38520.1| hypothetical protein CARUB_v10010309mg [Capsella rubella]) HSP 1 Score: 138.272 bits (347), Expect = 4.595e-37 Identity = 84/219 (38.36%), Postives = 124/219 (56.62%), Query Frame = 0
Query: 4 KKAGLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIV--SQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKK---LHKSIAARVQEEISAYKIQRE 217
+ GLLD+EK F FY AYH N +N IHI+ +WP++FT L+LL + I SQ+ L SLT + GV L N + VY FY+ L+ K +G F AAL+ +V +A+ + ++++ LA+ +CW QF+GHG+FE RAPAL NL+QAFLMAP FVLLEV+ + G + + A+V+ +I Y+ +++
Sbjct: 3 RMMGLLDLEKHFAFYGAYHSNPINIVIHIIFVWPIVFTALLLLHSTTPIFDPSQLGLSQSLT---LDGV-LRFNLGFMFTLVYALFYICLD-----KKSG---FVAALMCFSCWVGSSFLAV--------RLGASLSFK-VGLASQLLCWTGQFVGHGVFEKRAPALLDNLLQAFLMAPFFVLLEVLQSIFGYEPYPGFQARVNAKVENDIKEYRAKKQ 200
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|1040880670|ref|XP_017250180.1| (PREDICTED: uncharacterized endoplasmic reticulum membrane protein YGL010W [Daucus carota subsp. sativus]) HSP 1 Score: 137.887 bits (346), Expect = 4.720e-37 Identity = 84/218 (38.53%), Postives = 118/218 (54.13%), Query Frame = 0
Query: 7 GLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFE----NAKKMTGLGIFAAALVAILYF-VAGRLVALPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKK--LHKSIAARVQEEISAYKIQRE 217
GL D+EK F FY +YH N+VN +IH + +WP+ FT L+L + ++S + + G PL N+ L VY FY+ L+F A G +FA+ +IL F +A ++V LA +CW AQFIGHG+FE RAPALF NLVQAFLMAP FVLLE++ LL + HK++ AR++ I +K + +
Sbjct: 2 GLFDLEKHFAFYGSYHHNSVNIFIHTLFVWPIFFTALILCYFTPPLIS-------FSKILFLGHPLIFNFGFLLTVVYGLFYIGLDFRAGVLGAIMCFGCWVFASVFASILGFSLAWKVV----------------------LAAQIICWTAQFIGHGVFEKRAPALFDNLVQAFLMAPFFVLLEILMLLHYEPYPGFHKAVEARIEALIQEWKDKNK 190
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|922545698|ref|XP_013600635.1| (PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Brassica oleracea var. oleracea]) HSP 1 Score: 137.502 bits (345), Expect = 6.679e-37 Identity = 87/219 (39.73%), Postives = 124/219 (56.62%), Query Frame = 0
Query: 7 GLLDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGI--VSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVA--LPPLHAAYGKQSVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKK---LHKSIAARVQEEISAYKIQREI 218
GLLD+EK F FY AYH N +N IHI+ +WP++FT L+LL+ + I +SQ+ P S+T + GV L LN + Y FY+ L+ K +G F AAL+ +V ++A L P A + LA+ +CW QF+GHGLFE RAPAL NL QAFLMAP FVLLE++ L+ G + + A+V+ I ++ +++I
Sbjct: 3 GLLDLEKHFAFYGAYHSNPINIVIHIIFVWPIVFTALLLLYPASPIYDLSQLGFPQSMT---LDGV-LRLNVGFVVTVAYALFYICLD-----KKSG---FVAALMCFACWVGSSVLADRLGPSLAV-----------KVGLASQLLCWTGQFLGHGLFEKRAPALLDNLAQAFLMAPFFVLLEILQLVFGYEPYPGFQARVNAKVESSIKEWREKKQI 198
BLAST of EWM27358.1 vs. NCBI_GenBank
Match: gi|913779296|emb|CRK25239.1| (hypothetical protein BN1708_014194 [Verticillium longisporum] >gi|913845806|emb|CRK27306.1| hypothetical protein BN1723_003477 [Verticillium longisporum]) HSP 1 Score: 137.117 bits (344), Expect = 9.215e-37 Identity = 92/220 (41.82%), Postives = 118/220 (53.64%), Query Frame = 0
Query: 9 LDIEKQFTFYAAYHDNTVNKWIHIVCIWPLIFTGLMLLWTNAGIVSQISLPSSLTNLSVQGVPLTLNWALLAACVYIAFYLSLEFENAKKMTGLGIFAAALVAILYFVAGRLVALPPLH-AAYGKQ---SVEITYRQAALATHGMCWVAQFIGHGLFEGRAPALFTNLVQAFLMAPIFVLLEVVFLLGGKKKLHKSIAARVQEEISAYKIQREISSGKGR 224
LD+EK TFY AYH N+VN IH+ C+ PLI LL TN G + I LPS LT L LN LAA + A Y+ LE VAG L+A+ L AYG T QAAL TH +CW+ QFIGHG FE RAPAL NLVQA +AP+FV LE +FLLG +++L + V++EI+ +K + + + G+
Sbjct: 3 LDLEKHLTFYGAYHHNSVNIAIHMCCV-PLILYSGFLLATNTGTL--IPLPSWLT-----APYLELNLGTLAAITWGALYVLLEP----------------------VAGTLLAIISLAVTAYGNSLRIDNPTTTNQAALITHVVCWIFQFIGHGAFEKRAPALLDNLVQAIFLAPLFVWLEFLFLLGYRQELKARVDKAVEKEIAKFKAAQAVDAKSGK 192 The following BLAST results are available for this feature:
BLAST of EWM27358.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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