EWM27361.1, cds3312 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|585109577|gb|EWM27361.1| (3-oxoacid transferase 1 [Nannochloropsis gaditana]) HSP 1 Score: 172.555 bits (436), Expect = 1.316e-54 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDVDKVRAIFPHSLHSRGFSVVFRNAFRSIWL 84
MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDVDKVRAIFPHSLHSRGFSVVFRNAFRSIWL
Sbjct: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDVDKVRAIFPHSLHSRGFSVVFRNAFRSIWL 84
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|567966902|gb|ETK92093.1| (hypothetical protein L915_04454 [Phytophthora parasitica] >gi|567995335|gb|ETL45473.1| hypothetical protein L916_04424 [Phytophthora parasitica]) HSP 1 Score: 92.8189 bits (229), Expect = 1.425e-22 Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDV 55
MGGAMDLVGSGNRVVVTMEH AKG +KKILKSC+LPLTG VV+ IITEL VFDV
Sbjct: 36 MGGAMDLVGSGNRVVVTMEHNAKGGAKKILKSCSLPLTGKSVVNTIITELGVFDV 90
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|290995757|ref|XP_002680449.1| (coenzyme A transferase family protein [Naegleria gruberi] >gi|284094070|gb|EFC47705.1| coenzyme A transferase family protein [Naegleria gruberi]) HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-21 Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDV 55
MGGAMDLV SG+RVVVTMEHTAKG+S KILKSC+LPLTG +VV+RIITEL VFDV
Sbjct: 421 MGGAMDLVSSGSRVVVTMEHTAKGNSPKILKSCSLPLTGKQVVNRIITELAVFDV 475
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|1214695640|gb|OWZ09372.1| (Succinyl CoA transferase [Phytophthora megakarya]) HSP 1 Score: 95.1301 bits (235), Expect = 4.278e-21 Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDV 55
MGGAMDLVGSGNRVVVTMEH AKG +KKILKSC+LPLTG VV+ IITEL VFDV
Sbjct: 412 MGGAMDLVGSGNRVVVTMEHNAKGGAKKILKSCSLPLTGKNVVNTIITELGVFDV 466
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|570992414|gb|ETP49920.1| (hypothetical protein F442_04631 [Phytophthora parasitica P10297]) HSP 1 Score: 95.1301 bits (235), Expect = 4.477e-21 Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDV 55
MGGAMDLVGSGNRVVVTMEH AKG +KKILKSC+LPLTG VV+ IITEL VFDV
Sbjct: 407 MGGAMDLVGSGNRVVVTMEHNAKGGAKKILKSCSLPLTGKSVVNTIITELGVFDV 461
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|675185943|ref|XP_008901856.1| (hypothetical protein PPTG_08876 [Phytophthora parasitica INRA-310] >gi|566029304|gb|ETI52215.1| hypothetical protein F443_04582 [Phytophthora parasitica P1569] >gi|568024627|gb|ETL98657.1| hypothetical protein L917_04296 [Phytophthora parasitica] >gi|568055091|gb|ETM51851.1| hypothetical protein L914_04399 [Phytophthora parasitica] >gi|568098107|gb|ETN12842.1| hypothetical protein PPTG_08876 [Phytophthora parasitica INRA-310] >gi|570333030|gb|ETO80978.1| hypothetical protein F444_04612 [Phytophthora parasitica P1976] >gi|570957053|gb|ETP22032.1| hypothetical protein F441_04557 [Phytophthora parasitica CJ01A1] >gi|970638380|gb|KUF81917.1| succinyl-CoA:3-ketoacid coenzyme A transferase [Phytophthora nicotianae]) HSP 1 Score: 95.1301 bits (235), Expect = 4.704e-21 Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDV 55
MGGAMDLVGSGNRVVVTMEH AKG +KKILKSC+LPLTG VV+ IITEL VFDV
Sbjct: 407 MGGAMDLVGSGNRVVVTMEHNAKGGAKKILKSCSLPLTGKSVVNTIITELGVFDV 461
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|1173949726|gb|OQR97732.1| (succinyl CoA transferase [Achlya hypogyna]) HSP 1 Score: 95.1301 bits (235), Expect = 4.724e-21 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFD 54
MGGAMDLVGSGNRVVVTMEH AK S KILKSC+LPLTG +VV+RIITEL VFD
Sbjct: 369 MGGAMDLVGSGNRVVVTMEHNAKNGSAKILKSCSLPLTGKQVVNRIITELAVFD 422
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|673035744|ref|XP_008871833.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574472272|gb|ETV99277.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 94.7449 bits (234), Expect = 5.201e-21 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDVDKVRAIFPHSLHSRGFSV 73
MGGAMDLVGSGNRVVVTMEH AK S KILKSC LPLTG +VV+RIITEL VFDV + + + H+ G +V
Sbjct: 405 MGGAMDLVGSGNRVVVTMEHNAKNGSAKILKSCKLPLTGKQVVNRIITELAVFDVIQGKLVLIE--HAPGVTV 475
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|673035742|ref|XP_008871832.1| (hypothetical protein H310_08015 [Aphanomyces invadans] >gi|574472271|gb|ETV99276.1| hypothetical protein H310_08015 [Aphanomyces invadans]) HSP 1 Score: 94.7449 bits (234), Expect = 5.714e-21 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDVDKVRAIFPHSLHSRGFSV 73
MGGAMDLVGSGNRVVVTMEH AK S KILKSC LPLTG +VV+RIITEL VFDV + + + H+ G +V
Sbjct: 422 MGGAMDLVGSGNRVVVTMEHNAKNGSAKILKSCKLPLTGKQVVNRIITELAVFDVIQGKLVLIE--HAPGVTV 492
BLAST of EWM27361.1 vs. NCBI_GenBank
Match: gi|695401361|ref|XP_009522748.1| (hypothetical protein PHYSODRAFT_350484 [Phytophthora sojae] >gi|348680215|gb|EGZ20031.1| hypothetical protein PHYSODRAFT_350484 [Phytophthora sojae]) HSP 1 Score: 94.7449 bits (234), Expect = 6.304e-21 Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 1 MGGAMDLVGSGNRVVVTMEHTAKGDSKKILKSCTLPLTGPKVVDRIITELCVFDV 55
MGGAMDLVGSGNRVVVTMEH AKG +KKILKSC+LPLTG VV+ IITEL VFDV
Sbjct: 409 MGGAMDLVGSGNRVVVTMEHNAKGGAKKILKSCSLPLTGKSVVNTIITELGVFDV 463 The following BLAST results are available for this feature:
BLAST of EWM27361.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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