EWM27365.1, cds3310 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|553194081|ref|XP_005855889.1| (peroxiredoxin q [Nannochloropsis gaditana CCMP526] >gi|422293165|gb|EKU20465.1| peroxiredoxin q [Nannochloropsis gaditana CCMP526] >gi|585109582|gb|EWM27365.1| peroxiredoxin q [Nannochloropsis gaditana]) HSP 1 Score: 367.081 bits (941), Expect = 1.668e-128 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 Query: 1 MRIISVLALSLVMAAQAFMPSNGPSMGRSRGVMNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTLA 180 MRIISVLALSLVMAAQAFMPSNGPSMGRSRGVMNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTLA Sbjct: 1 MRIISVLALSLVMAAQAFMPSNGPSMGRSRGVMNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTLA 180
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|873227049|emb|CEM19577.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 203.371 bits (516), Expect = 1.577e-63 Identity = 94/157 (59.87%), Postives = 120/157 (76.43%), Query Frame = 0 Query: 24 PSMGRSRGVMNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTLA 180 PS+ ++M+KVG+ APDF+LKDQ+ KVVKLS+FK KK VV+FFYP D TPGCTK+A+AF+ AL DFKK GAEV G+SSD DH+ F+ YGL+M LLSD+GG RK +QVP ++FGAL GRVTYVIGKD ++ +YDN ESH+ ++ LA Sbjct: 39 PSLSHRYAPLSMVKVGEMAPDFSLKDQSGKVVKLSSFKNKKSVVVFFYPADMTPGCTKQAQAFNTALDDFKKLGAEVIGVSSDADHSEFISAYGLKMTLLSDIGGEVRKQWQVPGAMFGALPGRVTYVIGKDGIVKKVYDNLLDSESHIPQARAALA 195
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|545712962|ref|XP_005708785.1| (peroxiredoxin Q/BCP [Galdieria sulphuraria] >gi|452825267|gb|EME32265.1| peroxiredoxin Q/BCP [Galdieria sulphuraria]) HSP 1 Score: 177.948 bits (450), Expect = 1.803e-53 Identity = 86/147 (58.50%), Postives = 109/147 (74.15%), Query Frame = 0 Query: 33 MNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179 +NM+K G+AAPDF+LKDQ+ V+LS FKGKK V+L+FYPKDDTPGCTK+A F A+ DF + GAEV G+SSD+DH FV+KY L +LLSD G RK Y+VPS+ FG L GRVTYVI + ++ IY+NQF E HVE++ L Sbjct: 54 LNMVKEGEAAPDFSLKDQDGNNVRLSDFKGKKAVILYFYPKDDTPGCTKQALCFREAIEDFAQLGAEVIGVSSDQDHRKFVEKYKLPFKLLSDEGSKVRKLYEVPST-FGILPGRVTYVIDRQGIVKKIYNNQFRSELHVEEAKKAL 199
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|299471822|emb|CBN79489.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 170.629 bits (431), Expect = 2.205e-51 Identity = 82/145 (56.55%), Postives = 104/145 (71.72%), Query Frame = 0 Query: 35 MLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179 M+ VG AAPDF L +QN K V LS+FK KK+VV+FFYPKD TPGCTKEA+ F + L FKK GAEV GISSD DHT FV + L M LLSD+GG RKA++V ++FG +DGRVTYV+ K+ + +YDN +H +++L L Sbjct: 1 MVSVGQAAPDFKLNNQNGKPVALSSFKNKKKVVVFFYPKDSTPGCTKEAQTFQSDLAKFKKAGAEVIGISSDADHTEFVKENNLSMTLLSDIGGKVRKAWKVKGAVFGTIDGRVTYVLDKNGVVTSMYDNLLDGAAHSKEALKAL 145
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|545368462|ref|XP_005649012.1| (alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen [Coccomyxa subellipsoidea C-169] >gi|384250990|gb|EIE24468.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 163.31 bits (412), Expect = 2.418e-48 Identity = 81/152 (53.29%), Postives = 108/152 (71.05%), Query Frame = 0 Query: 33 MNMLKVGDAAPDFALKDQNNKVVKLSTFKG--KKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSD--EDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTLA 180 ++ KVGD APDF+LKDQ+ K VKLS+++G K VVL+FYP D +PGCTK+AKAF+ A+G+FKK GA V G+S D E H F + G+ QLL+D G RK Y V L G L+GR TYVIGKD ++L+++NQ+ PE HV+++L LA Sbjct: 4 LHATKVGDKAPDFSLKDQSGKTVKLSSYQGIFGKPVVLYFYPADASPGCTKQAKAFTDAIGEFKKAGATVVGVSGDDVESHQKFKSELGIPFQLLADEGNEVRKTYGVKKDLLGLLEGRQTYVIGKDGIVKLVFNNQWEPEKHVDEALKALA 155
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|743774151|ref|XP_010917427.1| (PREDICTED: peroxiredoxin Q, chloroplastic [Elaeis guineensis]) HSP 1 Score: 160.614 bits (405), Expect = 1.311e-46 Identity = 81/143 (56.64%), Postives = 96/143 (67.13%), Query Frame = 0 Query: 39 GDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDE--DHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179 GD P F LKDQN + V L+ FKGK VV++FYP D+TPGCTKEA AF + FKK GAEV GIS D+ H AF KYGL LLSD G RK + VPS LFG L GR TYVI + ++L+Y+NQF PE HVE++L L Sbjct: 68 GDVPPPFTLKDQNGRNVSLTRFKGK-PVVVYFYPADETPGCTKEACAFRDSYEKFKKAGAEVVGISGDDPASHKAFATKYGLPFTLLSDEGNTVRKEWGVPSDLFGVLPGRQTYVIDRKGVVQLVYNNQFQPEKHVEETLKLL 209
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|672166909|ref|XP_008803394.1| (PREDICTED: peroxiredoxin Q, chloroplastic-like [Phoenix dactylifera]) HSP 1 Score: 160.229 bits (404), Expect = 2.429e-46 Identity = 81/143 (56.64%), Postives = 95/143 (66.43%), Query Frame = 0 Query: 39 GDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDE--DHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179 GD P F LKDQN + V L+ FKGK VV +FYP D+TPGCTKEA AF + FKK GAEV GIS D+ H AF KYGL LLSD G RK + VPS LFG L GR TYVI + ++L+Y+NQF PE HVE++L L Sbjct: 69 GDVPPPFTLKDQNGRNVSLTRFKGKPAVV-YFYPADETPGCTKEACAFRDSYEKFKKAGAEVVGISGDDPASHKAFATKYGLPFTLLSDEGNKVRKEWGVPSDLFGVLPGRQTYVIDRKGAVQLVYNNQFQPEKHVEETLKLL 210
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|1035954403|gb|OAY76432.1| (Peroxiredoxin Q, chloroplastic, partial [Ananas comosus]) HSP 1 Score: 156.762 bits (395), Expect = 7.199e-46 Identity = 80/143 (55.94%), Postives = 97/143 (67.83%), Query Frame = 0 Query: 39 GDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDE--DHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179 GD P+F LKDQ+ K V LS FKGK VV++FYP D+TPGCTKEA AF + FKK GAEV GIS D+ H AF KY L LLSD G RK + VPS LFG L GR TYV+ ++ ++L+Y+NQF PE HVE++L L Sbjct: 4 GDVPPNFTLKDQDGKTVSLSKFKGK-PVVVYFYPADETPGCTKEACAFRDSYEKFKKAGAEVVGISGDDPSSHKAFATKYRLPFTLLSDEGNKVRKGWGVPSDLFGTLPGRQTYVLDRNGVVQLVYNNQFQPEKHVEETLKLL 145
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|565467886|ref|XP_006291823.1| (hypothetical protein CARUB_v10017999mg [Capsella rubella] >gi|482560530|gb|EOA24721.1| hypothetical protein CARUB_v10017999mg [Capsella rubella]) HSP 1 Score: 158.303 bits (399), Expect = 1.325e-45 Identity = 82/151 (54.30%), Postives = 100/151 (66.23%), Query Frame = 0 Query: 31 GVMNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDED--HTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179 G+ + G AAPDF LKDQN K V L +KGK VVL+FYP D+TPGCTK+A AF + FKK GAEV GIS D+ H AF KY L LLSD G RK + VP LFGAL GR TYV+ K+ ++LIY+NQF PE H++++L L Sbjct: 64 GIFAKVNKGQAAPDFTLKDQNGKPVSLKKYKGK-PVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 213
BLAST of EWM27365.1 vs. NCBI_GenBank
Match: gi|1002274243|ref|XP_015641442.1| (PREDICTED: putative peroxiredoxin Q, chloroplastic isoform X2 [Oryza sativa Japonica Group] >gi|158517782|sp|P0C5D4.1|PRXQ_ORYSI RecName: Full=Putative peroxiredoxin Q, chloroplastic; AltName: Full=Thioredoxin reductase; Flags: Precursor >gi|158517783|sp|P0C5D5.1|PRXQ_ORYSJ RecName: Full=Peroxiredoxin Q, chloroplastic; AltName: Full=Thioredoxin reductase; Flags: Precursor >gi|51090743|dbj|BAD35223.1| putative peroxiredoxin Q [Oryza sativa Japonica Group] >gi|113595092|dbj|BAF18966.1| Os06g0196300 [Oryza sativa Japonica Group] >gi|215765468|dbj|BAG87165.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218197740|gb|EEC80167.1| hypothetical protein OsI_22010 [Oryza sativa Indica Group] >gi|937921696|dbj|BAS96613.1| Os06g0196300 [Oryza sativa Japonica Group]) HSP 1 Score: 157.918 bits (398), Expect = 1.751e-45 Identity = 83/174 (47.70%), Postives = 110/174 (63.22%), Query Frame = 0 Query: 8 ALSLVMAAQAFMPSNGPSMGRSRGVMNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDE--DHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179 A + A+A +PS + GR+R V + G AAP+F L+DQ+ + V LS FKG+ VV++FYP D+TPGCTK+A AF + FKK GAEV GIS D+ H F KY L LLSD G RK + VP+ LFG L GR TYV+ K+ ++ IY+NQF PE H+ ++L L Sbjct: 45 ATTTPTPARAALPS---TTGRNRIVCGKVSKGSAAPNFTLRDQDGRAVSLSKFKGR-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEFKKKYKLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVVQYIYNNQFQPEKHIGETLKIL 214 The following BLAST results are available for this feature:
BLAST of EWM27365.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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