EWM27378.1, cds3295 (CDS) Nannochloropsis gaditana

Overview
NameEWM27378.1
Unique Namecds3295
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:54937..55032 -
Alignment locationCM002461.1:54543..54683 -
Alignment locationCM002461.1:54106..54372 -

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Properties
Property NameValue
Protein idEWM27378.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100438g2.1493.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:54937..55032 -
CM002461.1supercontigCM002461.1:54543..54683 -
CM002461.1supercontigCM002461.1:54106..54372 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27378.1 vs. NCBI_GenBank
Match: gi|585109603|gb|EWM27378.1| (hypothetical protein Naga_100438g2 [Nannochloropsis gaditana])

HSP 1 Score: 339.732 bits (870), Expect = 4.083e-118
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 
Query:    1 MGCHLSGVLCLERRGDLWRRRWWEKGHLLTYQTLPVTWPPSRCRGPRRTGSRALTRSWTLAGGRSTAGMACGMGGDGPQSPRIPAVQRATRHLKMRMLRTVCNVHQGDREMWGIFGFFPQLVECHARGQVEANRGAKKGKDGRMMTECTGVQARCETEGKKSCRIIT 167
            MGCHLSGVLCLERRGDLWRRRWWEKGHLLTYQTLPVTWPPSRCRGPRRTGSRALTRSWTLAGGRSTAGMACGMGGDGPQSPRIPAVQRATRHLKMRMLRTVCNVHQGDREMWGIFGFFPQLVECHARGQVEANRGAKKGKDGRMMTECTGVQARCETEGKKSCRIIT
Sbjct:    1 MGCHLSGVLCLERRGDLWRRRWWEKGHLLTYQTLPVTWPPSRCRGPRRTGSRALTRSWTLAGGRSTAGMACGMGGDGPQSPRIPAVQRATRHLKMRMLRTVCNVHQGDREMWGIFGFFPQLVECHARGQVEANRGAKKGKDGRMMTECTGVQARCETEGKKSCRIIT 167
The following BLAST results are available for this feature:
BLAST of EWM27378.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109603|gb|EWM27378.1|4.083e-118100.00hypothetical protein Naga_100438g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3304rna3304Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications