EWM27425.1, cds3249 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|585109662|gb|EWM27425.1| (sulfite oxidase [Nannochloropsis gaditana]) HSP 1 Score: 483.026 bits (1242), Expect = 1.042e-172 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0 Query: 1 MLRHAVVRFPAAFKRINVIRGGCLAQCSPCRSLEIHRHSHARVMTSAAAALSSSFQDKRDTGNTRAVVLLALSLIAGVGGIRTASPAQTEAGATDAGVKEIEYTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSPEDEKEVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVDRRGLLARG 234 MLRHAVVRFPAAFKRINVIRGGCLAQCSPCRSLEIHRHSHARVMTSAAAALSSSFQDKRDTGNTRAVVLLALSLIAGVGGIRTASPAQTEAGATDAGVKEIEYTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSPEDEKEVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVDRRGLLARG Sbjct: 1 MLRHAVVRFPAAFKRINVIRGGCLAQCSPCRSLEIHRHSHARVMTSAAAALSSSFQDKRDTGNTRAVVLLALSLIAGVGGIRTASPAQTEAGATDAGVKEIEYTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSPEDEKEVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVDRRGLLARG 234
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|1101645604|ref|XP_018922021.1| (PREDICTED: sulfite oxidase, mitochondrial [Cyprinus carpio]) HSP 1 Score: 153.68 bits (387), Expect = 5.953e-42 Identity = 78/162 (48.15%), Postives = 106/162 (65.43%), Query Frame = 0 Query: 74 LIAGVGGIRTASPAQ--TEAGATDAGVKEIE------YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLK-HSPEDEKEVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 L+AG G + Q + AT A ++ + YT +V H+++++GVWVTYK GVYDIT+F HPGG+KIL+AAGG +EPYW LYAVH+ Q+ + EIL E +IG L S + ++ + DPY+ EP RHPA +INTLKPFNAEPP ++L D Sbjct: 118 LLAGTGAVLAYKLHQDKVQLAATSAQLRVTQTSDLPVYTLEEVTKHRSLDSGVWVTYKGGVYDITEFVAIHPGGDKILLAAGGALEPYWALYAVHQ----QDHVLEILSEYKIGVLNPESYKKQESANPSDPYSAEPTRHPALQINTLKPFNAEPPASILSD 275
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|459186070|ref|XP_002125613.2| (PREDICTED: sulfite oxidase-like [Ciona intestinalis]) HSP 1 Score: 157.918 bits (398), Expect = 1.428e-41 Identity = 71/124 (57.26%), Postives = 94/124 (75.81%), Query Frame = 0 Query: 103 YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSPEDEKEVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 Y+ ++ H T + G+WV+YKDGVYDIT+F ++HPGG KIL+A+GGP++P+WN+YAVHK EV EIL + +IG L SPED+K +DL+DP+A EP R P F+IN+ KPFNAEPP LL D Sbjct: 87 YSSQEIMKHTTKDNGIWVSYKDGVYDITEFVDSHPGGEKILLASGGPIDPFWNMYAVHKSEEVL----EILEQYKIGIL--SPEDQKPIDLNDPFAKEPARLPVFRINSKKPFNAEPPLELLTD 204
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|961923276|ref|XP_014861901.1| (PREDICTED: sulfite oxidase, mitochondrial [Poecilia mexicana] >gi|961923280|ref|XP_014861902.1| PREDICTED: sulfite oxidase, mitochondrial [Poecilia mexicana]) HSP 1 Score: 155.221 bits (391), Expect = 1.956e-40 Identity = 92/215 (42.79%), Postives = 123/215 (57.21%), Query Frame = 0 Query: 30 CRSL-EIHRHSHARVMTSAAAAL-SSSFQDKRD------TGNTRAVVLLALSLIAGVGGIRTASPAQTEAGATDAGVKEIE-------YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSPEDEK---EVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 CRSL + RH A S A L SSS +D+R + N + +V ++ G G + T E DAG+ E ++ +V H+++E GVWVTYK GVYD+T+F HPGGNKIL+AAGG +EP+W LYAVH QE + EIL + ++G L S ED K E DPY+ +PERHP +IN+ KPFNAEPP +L + Sbjct: 7 CRSLTRLQRHQAAPCFASRAVRLCSSSTEDQRSHQRANWSANWKRIVA---GVLTGTGAVVTYGLLHQEVEQADAGLPTTERSSSLPVFSHDEVTKHRSLEDGVWVTYKGGVYDVTEFVPIHPGGNKILLAAGGALEPFWALYAVHD----QEYVLEILSQYKVGEL--SAEDLKKQGEAKASDPYSSDPERHPVLRINSKKPFNAEPPPEILTE 212
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|617500038|ref|XP_007540798.1| (PREDICTED: sulfite oxidase, mitochondrial [Poecilia formosa] >gi|617500041|ref|XP_007540799.1| PREDICTED: sulfite oxidase, mitochondrial [Poecilia formosa]) HSP 1 Score: 155.221 bits (391), Expect = 1.976e-40 Identity = 92/215 (42.79%), Postives = 123/215 (57.21%), Query Frame = 0 Query: 30 CRSL-EIHRHSHARVMTSAAAAL-SSSFQDKRD------TGNTRAVVLLALSLIAGVGGIRTASPAQTEAGATDAGVKEIE-------YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSPEDEK---EVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 CRSL + RH A S A L SSS +D+R + N + +V ++ G G + T E DAG+ E ++ +V H+++E GVWVTYK GVYD+T+F HPGGNKIL+AAGG +EP+W LYAVH QE + EIL + ++G L S ED K E DPY+ +PERHP +IN+ KPFNAEPP +L + Sbjct: 7 CRSLTRLQRHQAAPCFASRAVRLCSSSTEDQRSHQRANWSANWKRIVA---GVLTGTGAVVTYGLLHQEVEQADAGLPTTERSSSLPVFSHDEVTKHRSLEDGVWVTYKGGVYDVTEFVPIHPGGNKILLAAGGALEPFWALYAVHD----QEYVLEILSQYKVGEL--SAEDLKKQGEAKASDPYSSDPERHPVLRINSKKPFNAEPPPEILTE 212
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|961984380|ref|XP_014872010.1| (PREDICTED: sulfite oxidase, mitochondrial [Poecilia latipinna] >gi|961984384|ref|XP_014872012.1| PREDICTED: sulfite oxidase, mitochondrial [Poecilia latipinna]) HSP 1 Score: 155.221 bits (391), Expect = 2.190e-40 Identity = 92/215 (42.79%), Postives = 123/215 (57.21%), Query Frame = 0 Query: 30 CRSL-EIHRHSHARVMTSAAAAL-SSSFQDKRD------TGNTRAVVLLALSLIAGVGGIRTASPAQTEAGATDAGVKEIE-------YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSPEDEK---EVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 CRSL + RH A S A L SSS +D+R + N + +V ++ G G + T E DAG+ E ++ +V H+++E GVWVTYK GVYD+T+F HPGGNKIL+AAGG +EP+W LYAVH QE + EIL + ++G L S ED K E DPY+ +PERHP +IN+ KPFNAEPP +L + Sbjct: 7 CRSLTRLQRHQAAPCFASRAVRLCSSSTEDQRSHQRANWSANWKRIVA---GVLTGTGAVVTYGLLHQEVEQADAGLPTTERSSSLPVFSHDEVTKHRSLEDGVWVTYKGGVYDVTEFVPIHPGGNKILLAAGGALEPFWALYAVHD----QEYVLEILSQYKVGEL--SAEDLKKQGEAKASDPYSSDPERHPVLRINSKKPFNAEPPPEILTE 212
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|1041097413|ref|XP_017271431.1| (PREDICTED: sulfite oxidase, mitochondrial [Kryptolebias marmoratus] >gi|1041097415|ref|XP_017271432.1| PREDICTED: sulfite oxidase, mitochondrial [Kryptolebias marmoratus]) HSP 1 Score: 154.066 bits (388), Expect = 4.888e-40 Identity = 88/213 (41.31%), Postives = 122/213 (57.28%), Query Frame = 0 Query: 24 LAQCSPCRSLEIHRHSHARVMTSAAAALSSSF--QDKRDTGNTRAVVLLALSLIAGVGGIRTASPAQTEAGATDAGVKEIE-------YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSP-EDEKEVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 L +C P + HRH + S A L SS +D+R + T +LA L+AG G + Q +A D GV +E +++ +V H ++E GVWVTYK VYDIT+F HPGGNKIL+AAGG +EP+W LYAVH QE + EIL + ++G L + ++ + DP++ +PERHP +INT KPFN EPP +L D Sbjct: 10 LTRCGPVST---HRHKVTPAVASCTARLCSSSGAEDQRLSQRTNWKHVLA-GLLAGTGAVLAYGLHQHKAEQADVGVSTLEKSSPLPIFSQDEVTKHSSLEHGVWVTYKGSVYDITEFVAMHPGGNKILLAAGGALEPFWALYAVHN----QEHVLEILSQYKVGELTEDDLKKQRAAEPTDPFSSDPERHPVLRINTRKPFNGEPPPEILSD 214
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|1007751285|ref|XP_015815180.1| (PREDICTED: sulfite oxidase, mitochondrial [Nothobranchius furzeri] >gi|1007751287|ref|XP_015815182.1| PREDICTED: sulfite oxidase, mitochondrial [Nothobranchius furzeri]) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-40 Identity = 87/218 (39.91%), Postives = 124/218 (56.88%), Query Frame = 0 Query: 18 VIRGGC-LAQCSPCRSLEIHRHSHARVMTSAAAALSSSFQDKRDTGNTRAVVLLALSLIAGVGGIRTASPAQTEAGATDAGVKEIE-------YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTL-KHSPEDEKEVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 ++R C L +C P + R A +TS AA SS + + + + L+AG G + S + +A D V E +++ +V H+++E GVWVTYK GVYDIT+F HPGGNKIL+AAGG +EP+W LYAVH QE + EIL E ++G L + + ++ DP++ +PERHP ++NTLKPFNAEPP +L D Sbjct: 3 LLRRCCSLTRCGP---ISTRRLKVAPAVTSCAARFCSSGSEDQSSYQCANWKHILAGLLAGTGAVLVYSQHRHKAERADVSVTITEKGSLLPVFSQDEVTKHRSLEDGVWVTYKGGVYDITEFVAMHPGGNKILLAAGGALEPFWALYAVHD----QEHVLEILSEYKVGELCEEDLKKQQASKPSDPFSSDPERHPVLQVNTLKPFNAEPPPEILSD 213
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|831326853|ref|XP_012696563.1| (PREDICTED: sulfite oxidase, mitochondrial [Clupea harengus] >gi|831326855|ref|XP_012696564.1| PREDICTED: sulfite oxidase, mitochondrial [Clupea harengus]) HSP 1 Score: 152.14 bits (383), Expect = 2.790e-39 Identity = 86/224 (38.39%), Postives = 124/224 (55.36%), Query Frame = 0 Query: 24 LAQCSPCRSLEIHRHSHARVMTSAAAALSSS----FQDKRDTGNTRAVVLLALSL---------IAGVGGIRTASPAQTEAGATDAGVKEIE------YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIG--TLKHSPEDEKEVDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 L C + R A+++ A A+++ +Q D G V +LSL +AG G + ++A ++ + Y++ +V HK++ GVWVTYK GVYDIT F HPGG+KIL+AAGG +EP+W+LYAVH Q+ + EIL E ++G +L+ + +K D DPY+ +PERHPA +N+LKPFNAEPP ALL D Sbjct: 4 LRHCQGLARVSFLRTQRAQLLKGVAPAVTACVVPRWQSSGDYGGQSGQVHNSLSLRWTHLLAGLVAGTGAVLAYGLHNSQAERAATPIEPVTQSSFPIYSQDEVTKHKSLNEGVWVTYKGGVYDITTFISMHPGGDKILLAAGGALEPFWSLYAVHG----QDHVLEILSEYKVGELSLEDQKKQQKNADSSDPYSTDPERHPALNVNSLKPFNAEPPPALLSD 223
BLAST of EWM27425.1 vs. NCBI_GenBank
Match: gi|1079769708|ref|XP_018554620.1| (PREDICTED: LOW QUALITY PROTEIN: sulfite oxidase, mitochondrial [Lates calcarifer]) HSP 1 Score: 152.14 bits (383), Expect = 2.983e-39 Identity = 80/163 (49.08%), Postives = 106/163 (65.03%), Query Frame = 0 Query: 74 LIAGVGGIRTASPAQTEAGATDAGVKEIE-------YTKADVKAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQETIKEILGELRIGTLKHSPEDEKE---VDLDDPYAHEPERHPAFKINTLKPFNAEPPGALLVD 226 L+AG G + Q +A ++ V+ IE Y++ +V H+++E GVWVTYK GVYDITKF HPGG+KIL+AAGG +EP+W LYAVH QE + EIL E ++G L S ED+K+ + DPY+ +PERHP +IN LKPFNAEPP +L D Sbjct: 61 LLAGTGAVLAYGFHQHKAERAESRVQTIEKTSSLPVYSQEEVTKHRSLEDGVWVTYKGGVYDITKFVAMHPGGDKILLAAGGALEPFWALYAVHN----QEHVLEILSEYKVGEL--SAEDQKKQQALKSSDPYSSDPERHPVLRINNLKPFNAEPPPEILSD 217 The following BLAST results are available for this feature:
BLAST of EWM27425.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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