EWM27430.1, cds3244 (CDS) Nannochloropsis gaditana

Overview
NameEWM27430.1
Unique Namecds3244
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1125601..1126130 +
Alignment locationCM002460.1:1126392..1126524 +

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Properties
Property NameValue
Protein idEWM27430.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100951g1.1370.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1125601..1126130 +
CM002460.1supercontigCM002460.1:1126392..1126524 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27430.1 vs. NCBI_GenBank
Match: gi|585109674|gb|EWM27430.1| (hypothetical protein Naga_100951g1 [Nannochloropsis gaditana])

HSP 1 Score: 444.121 bits (1141), Expect = 1.017e-157
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 
Query:    1 MERRLEQIMREREDCWRAVNSIKTDLTTQTLLKKCMACAYARQLVPCPVCHFTSPGGRVALRPASCTGTSLSDTHIPSVKCMLPPPDFISAHIYPIPHMHTLAPFLFPFLCNYLLQPPLSSPWPHARAFESAAPPSLRGPQTGPRQPIQDAADCRQTLPSTGRACVRRWTTWTTTSRTLPPKQSGGKPTTLPKRSRRQRQPALISRTQRPGWRKPRRARM 220
            MERRLEQIMREREDCWRAVNSIKTDLTTQTLLKKCMACAYARQLVPCPVCHFTSPGGRVALRPASCTGTSLSDTHIPSVKCMLPPPDFISAHIYPIPHMHTLAPFLFPFLCNYLLQPPLSSPWPHARAFESAAPPSLRGPQTGPRQPIQDAADCRQTLPSTGRACVRRWTTWTTTSRTLPPKQSGGKPTTLPKRSRRQRQPALISRTQRPGWRKPRRARM
Sbjct:    1 MERRLEQIMREREDCWRAVNSIKTDLTTQTLLKKCMACAYARQLVPCPVCHFTSPGGRVALRPASCTGTSLSDTHIPSVKCMLPPPDFISAHIYPIPHMHTLAPFLFPFLCNYLLQPPLSSPWPHARAFESAAPPSLRGPQTGPRQPIQDAADCRQTLPSTGRACVRRWTTWTTTSRTLPPKQSGGKPTTLPKRSRRQRQPALISRTQRPGWRKPRRARM 220
The following BLAST results are available for this feature:
BLAST of EWM27430.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109674|gb|EWM27430.1|1.017e-157100.00hypothetical protein Naga_100951g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3253rna3253Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications