EWM27437.1, cds3238 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27437.1 vs. NCBI_GenBank
Match: gi|585109685|gb|EWM27437.1| (hypothetical protein Naga_100482g2 [Nannochloropsis gaditana]) HSP 1 Score: 721.465 bits (1861), Expect = 0.000e+0 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
Query: 1 MDLEPNSPQVFVNDCNNEEESPPFSPLDSLPQVPSPLPSPASPVMASHILKSVRLEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKGELVPWEG 355
MDLEPNSPQVFVNDCNNEEESPPFSPLDSLPQVPSPLPSPASPVMASHILKSVRLEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKGELVPWEG
Sbjct: 1 MDLEPNSPQVFVNDCNNEEESPPFSPLDSLPQVPSPLPSPASPVMASHILKSVRLEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKGELVPWEG 355
BLAST of EWM27437.1 vs. NCBI_GenBank
Match: gi|553187299|ref|XP_005854579.1| (rna (guanine-9-)-methyltransferase domain-containing protein 2 [Nannochloropsis gaditana CCMP526] >gi|422294479|gb|EKU21779.1| rna (guanine-9-)-methyltransferase domain-containing protein 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0 Identity = 345/351 (98.29%), Postives = 346/351 (98.58%), Query Frame = 0
Query: 1 MDLEPNSPQVFVNDCNNEEESPPFSPLDSLPQVPSPLPSPASPVMASHILKSVR----LEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSK 347
MDLEPNSPQVFVNDCNNEEESPPF PLDSLPQVPSPLPSPASPVMASHILKSVR LEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTA+VLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSK
Sbjct: 7 MDLEPNSPQVFVNDCNNEEESPPFPPLDSLPQVPSPLPSPASPVMASHILKSVRPKNPLEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTADVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSK 357
BLAST of EWM27437.1 vs. NCBI_GenBank
Match: gi|1032154414|gb|OAO17656.1| (tRNA m(1)G methyltransferase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 64.3142 bits (155), Expect = 6.014e-8 Identity = 41/131 (31.30%), Postives = 69/131 (52.67%), Query Frame = 0
Query: 218 QNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPI-FHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSK 347
+ E+ ++ + LAA ++ R+A+D+HY ++++G+ S+ +Q+G C+ A K A NT + HV T ++ G WP+ HA + +VFPR IVY +PDA + A +D SK
Sbjct: 15 KKEQKEKVKMEKLAARKQKLWDAVKTGQRVAIDIHYQDQMNGVE-QYSVVRQLGLCHKANKDA----NTHLSIHVCGATPETTPAIQSFGAAKWPMTFHAEDLKDVFPREDIVYFSPDATEPCGA-IDPSK 139
BLAST of EWM27437.1 vs. NCBI_GenBank
Match: gi|950897297|ref|XP_014529269.1| (hypothetical protein JH06_4654 [Blastocystis sp. subtype 4] >gi|902863885|gb|KNB45831.1| hypothetical protein JH06_4654 [Blastocystis sp. subtype 4]) HSP 1 Score: 62.7734 bits (151), Expect = 2.480e-7 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 0
Query: 217 DQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASV-VEVFPRPSIVYLTPDADQVLAAPLDLSK 347
+Q+E+ +R+Q+ +L RIA+D+HY +++ + + S+ +Q+G C+ A K A + + HV T + G H WP+ H S+ EVF +VYL+PDAD+VL +D SK
Sbjct: 78 EQSEQEERKQQ---------MWDALATGQRIAIDIHYQDQMTSVEQS-SVIRQLGLCHRANKDAKTHVS---LHVCGSTPETNTAMHSFGAHKWPMTFHQESIREEVFSVNELVYLSPDADEVLDT-IDTSK 195 The following BLAST results are available for this feature:
BLAST of EWM27437.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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