EWM27434.1, cds3235 (CDS) Nannochloropsis gaditana

Overview
NameEWM27434.1
Unique Namecds3235
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1107614..1108326 -

Link to JBrowse

Properties
Property NameValue
Start range1107614
Start range.
Protein idEWM27434.1
Productpara-aminobenzoate synthase
Partialtrue
Orig transcript idgnl|cribi|Naga_100482g5.2384.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1107614..1108326 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR017926GATASE
IPR029062Class_I_gatase-like
Homology
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|585109682|gb|EWM27434.1| (para-aminobenzoate synthase, partial [Nannochloropsis gaditana])

HSP 1 Score: 481.871 bits (1239), Expect = 4.255e-172
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query:    1 MRSRLKRAEIRRRGGYGCLLATAVVAVELVSKASAFGSGKLSLFAQPLTRPRPPKHRVFSSLSSSTPDPPPLRTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEPPPGREKRREGGREGARV 238
            MRSRLKRAEIRRRGGYGCLLATAVVAVELVSKASAFGSGKLSLFAQPLTRPRPPKHRVFSSLSSSTPDPPPLRTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEPPPGREKRREGGREGARV
Sbjct:    1 MRSRLKRAEIRRRGGYGCLLATAVVAVELVSKASAFGSGKLSLFAQPLTRPRPPKHRVFSSLSSSTPDPPPLRTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEPPPGREKRREGGREGARV 238          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|553178542|ref|XP_005852569.1| (anthranilate synthase component II, partial [Nannochloropsis gaditana CCMP526] >gi|422295966|gb|EKU23265.1| anthranilate synthase component II, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 307.76 bits (787), Expect = 5.660e-103
Identity = 150/165 (90.91%), Postives = 153/165 (92.73%), Query Frame = 0
Query:   72 LRTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEPPPGREKRREGGREGA 236
            L+   I     YTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEPP  RE ++EGGREG 
Sbjct:    5 LKRAEIRRRGGYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEPP--REGKKEGGREGG 167          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|1055571160|ref|WP_067213606.1| (anthranilate synthase component II [Sporosarcina psychrophila] >gi|1005382417|gb|AMQ08191.1| glutamine amidotransferase [Sporosarcina psychrophila])

HSP 1 Score: 150.984 bits (380), Expect = 4.533e-42
Identity = 74/149 (49.66%), Postives = 98/149 (65.77%), Query Frame = 0
Query:   72 LRTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVE 220
            +RTLLIDNYDSYT NL   +A +N  +P  ++ ND  Q +W  L +           FDN++ISPGPG+P K  DFG+ R  L L  VPILGVCLGHQG  +  G +V++AP  PMHGR+S++ H    +F+ +PQ+F  VRYHSL+VE
Sbjct:    1 MRTLLIDNYDSYTFNLYQLIASINEELP-IVVRND--QYSWNELQS---------ISFDNVIISPGPGTPTKEKDFGVCRDVLRLSEVPILGVCLGHQGFAHTFGAKVVKAP-TPMHGRISKVFHNDSELFKGVPQEFEVVRYHSLIVE 136          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|550246585|ref|WP_022596000.1| (aminodeoxychorismate synthase, component I [Rhodococcus hoagii] >gi|549121816|gb|ERN45893.1| anthranilate synthase [Rhodococcus hoagii NBRC 101255 = C 7] >gi|1181082007|gb|ORJ96036.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181114730|gb|ORL27019.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181587899|gb|ORM00370.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181614253|gb|ORM27090.1| aminobenzoate synthetase [Rhodococcus hoagii])

HSP 1 Score: 160.614 bits (405), Expect = 7.913e-42
Identity = 87/157 (55.41%), Postives = 108/157 (68.79%), Query Frame = 0
Query:   73 RTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEP-PPGREKR 228
            RTLLIDNYDS+T+NL   L+EVN G PP +++NDA   +W  +          L  FDNIVISPGPG P++  DFG+S  A+    +P+LGVCLGHQGL +L GG V  AP  PMHGR+S I HTG GIFQ +P  FPAVRYHSL+V+  PP  E++
Sbjct:    4 RTLLIDNYDSFTYNLYSLLSEVN-GEPPVVVHNDA---DWASV---------PLVDFDNIVISPGPGRPDRKRDFGISARAIANREIPVLGVCLGHQGLCHLFGGSVGLAPV-PMHGRISSIRHTGTGIFQGIPSPFPAVRYHSLIVDSMPPELEEQ 146          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|491656436|ref|WP_005513155.1| (aminodeoxychorismate synthase, component I [Rhodococcus hoagii] >gi|325552320|gb|EGD22009.1| aminodeoxychorismate synthase, component I [Rhodococcus hoagii ATCC 33707])

HSP 1 Score: 160.614 bits (405), Expect = 8.403e-42
Identity = 87/157 (55.41%), Postives = 108/157 (68.79%), Query Frame = 0
Query:   73 RTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEP-PPGREKR 228
            RTLLIDNYDS+T+NL   L+EVN G PP +++NDA   +W  +          L  FDNIVISPGPG P++  DFG+S  A+    +P+LGVCLGHQGL +L GG V  AP  PMHGR+S I HTG GIFQ +P  FPAVRYHSL+V+  PP  E++
Sbjct:    4 RTLLIDNYDSFTYNLYSLLSEVN-GEPPVVVHNDA---DWASV---------PLVDFDNIVISPGPGRPDRKRDFGISARAIANREIPVLGVCLGHQGLCHLFGGSVGLAPV-PMHGRISSIRHTGTGIFQGIPSPFPAVRYHSLIVDSMPPELEEQ 146          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|1173330657|ref|WP_081187612.1| (aminodeoxychorismate synthase, component I [Rhodococcus hoagii] >gi|1172989979|gb|OQQ36588.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181565471|gb|ORL78769.1| aminobenzoate synthetase [Rhodococcus hoagii])

HSP 1 Score: 160.614 bits (405), Expect = 8.659e-42
Identity = 87/157 (55.41%), Postives = 108/157 (68.79%), Query Frame = 0
Query:   73 RTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEP-PPGREKR 228
            RTLLIDNYDS+T+NL   L+EVN G PP +++NDA   +W  +          L  FDNIVISPGPG P++  DFG+S  A+    +P+LGVCLGHQGL +L GG V  AP  PMHGR+S I HTG GIFQ +P  FPAVRYHSL+V+  PP  E++
Sbjct:    4 RTLLIDNYDSFTYNLYSLLSEVN-GEPPVVVHNDA---DWASV---------PLVDFDNIVISPGPGRPDRKRDFGISARAIANREIPVLGVCLGHQGLCHLFGGSVGLAPV-PMHGRISSIRHTGTGIFQGIPSPFPAVRYHSLIVDSMPPELEEQ 146          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|490034818|ref|WP_003937241.1| (aminodeoxychorismate synthase, component I [Rhodococcus ruber] >gi|452957451|gb|EME62818.1| anthranilate synthase [Rhodococcus ruber BKS 20-38])

HSP 1 Score: 160.229 bits (404), Expect = 1.046e-41
Identity = 90/157 (57.32%), Postives = 107/157 (68.15%), Query Frame = 0
Query:   69 PPP--LRTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEPPP 223
            PPP  +RTLLIDNYDS+T+NL   LAEVN GVPPT++ ND     W  L          L  FDNIV+SPGPG P++A DFG+S  AL    +P+LGVCLGHQGL  L G  V+RAP  P+HGRLS+I HTG G+F  +P  F AVRYHSLVV+  P
Sbjct:    5 PPPGSIRTLLIDNYDSFTYNLYSLLAEVN-GVPPTVVSNDT---PWESL---------DLDRFDNIVVSPGPGRPDRARDFGISSHALLDSGLPVLGVCLGHQGLCNLFGSEVVRAP-QPVHGRLSRIRHTGTGLFAGIPSPFAAVRYHSLVVDRVP 147          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|1030023937|ref|WP_064079172.1| (aminodeoxychorismate synthase, component I [Rhodococcus hoagii] >gi|1181084967|gb|ORJ98976.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181094981|gb|ORL07975.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181561695|gb|ORL75002.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181577225|gb|ORL90313.1| aminobenzoate synthetase [Rhodococcus hoagii])

HSP 1 Score: 160.229 bits (404), Expect = 1.331e-41
Identity = 86/157 (54.78%), Postives = 109/157 (69.43%), Query Frame = 0
Query:   73 RTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEP-PPGREKR 228
            RTLLIDNYDS+T+NL   L+EVN G PP +++NDA   +W  +          L  FDNIVISPGPG P++  DFG+S  A+    +P+LGVCLGHQGL +L GG V  AP  PMHGR+S I HTG GIF+++P  FPAVRYHSL+V+  PP  E++
Sbjct:    4 RTLLIDNYDSFTYNLYSLLSEVN-GEPPVVVHNDA---DWASV---------PLVDFDNIVISPGPGRPDRKRDFGISARAIANREIPVLGVCLGHQGLCHLFGGSVGLAPV-PMHGRISSIRHTGTGIFESIPSPFPAVRYHSLIVDSMPPELEEQ 146          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|1071429619|ref|WP_069854840.1| (MULTISPECIES: aminodeoxychorismate synthase, component I [Rhodococcus] >gi|1050725173|dbj|GAU52498.1| anthranilate synthase component 1 [Rhodococcus sp. Br-6] >gi|1179890106|dbj|GAW60351.1| anthranilate synthase component 1 [Rhodococcus sp. Br-6] >gi|1181132740|gb|ORL42184.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181591899|gb|ORM04939.1| aminobenzoate synthetase [Rhodococcus hoagii] >gi|1181597831|gb|ORM10766.1| aminobenzoate synthetase [Rhodococcus hoagii])

HSP 1 Score: 159.844 bits (403), Expect = 1.659e-41
Identity = 86/157 (54.78%), Postives = 108/157 (68.79%), Query Frame = 0
Query:   73 RTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVVEP-PPGREKR 228
            RTLLIDNYDS+T+NL   L+EVN G PP +++NDA   +W  +          L  FDNIVISPGPG P++  DFG+S  A+    +P+LGVCLGHQGL +L GG V  AP  PMHGR+S I HTG GIF+ +P  FPAVRYHSL+V+  PP  E++
Sbjct:    4 RTLLIDNYDSFTYNLYSLLSEVN-GEPPVVVHNDA---DWASV---------PLVDFDNIVISPGPGRPDRKRDFGISARAIANREIPVLGVCLGHQGLCHLFGGSVGLAPV-PMHGRISSIRHTGTGIFEGIPSPFPAVRYHSLIVDSMPPELEEQ 146          
BLAST of EWM27434.1 vs. NCBI_GenBank
Match: gi|1210101184|dbj|BAY20314.1| (para-aminobenzoate synthase subunit I [Calothrix sp. NIES-2100])

HSP 1 Score: 159.844 bits (403), Expect = 1.749e-41
Identity = 82/148 (55.41%), Postives = 99/148 (66.89%), Query Frame = 0
Query:   72 LRTLLIDNYDSYTHNLAHYLAEVNHGVPPTIIYNDAFQGNWTRLLAAYRLPNSTLFPFDNIVISPGPGSPEKASDFGLSRLALDLDSVPILGVCLGHQGLGYLHGGRVIRAPCGPMHGRLSQITHTGRGIFQNLPQDFPAVRYHSLVV 219
            ++TL+IDNYDSYT NL   +AEVN G  PT+IYND F   W  +           + FDNIVISPGPG PE + DFG+ RLA+    VP+LGVCLGHQGLGY+ GG+VI AP    HGRLSQ+ H G  +F  +P  F  VRYHSL+V
Sbjct:    1 MKTLIIDNYDSYTFNLYQLIAEVN-GEYPTVIYNDRFA--WDEVKQ---------WEFDNIVISPGPGRPENSKDFGICRLAIQNTQVPLLGVCLGHQGLGYVFGGKVIHAP-EVRHGRLSQVYHNGTDLFAGIPSPFSVVRYHSLIV 135          
The following BLAST results are available for this feature:
BLAST of EWM27434.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109682|gb|EWM27434.1|4.255e-172100.00para-aminobenzoate synthase, partial [Nannochlorop... [more]
gi|553178542|ref|XP_005852569.1|5.660e-10390.91anthranilate synthase component II, partial [Nanno... [more]
gi|1055571160|ref|WP_067213606.1|4.533e-4249.66anthranilate synthase component II [Sporosarcina p... [more]
gi|550246585|ref|WP_022596000.1|7.913e-4255.41aminodeoxychorismate synthase, component I [Rhodoc... [more]
gi|491656436|ref|WP_005513155.1|8.403e-4255.41aminodeoxychorismate synthase, component I [Rhodoc... [more]
gi|1173330657|ref|WP_081187612.1|8.659e-4255.41aminodeoxychorismate synthase, component I [Rhodoc... [more]
gi|490034818|ref|WP_003937241.1|1.046e-4157.32aminodeoxychorismate synthase, component I [Rhodoc... [more]
gi|1030023937|ref|WP_064079172.1|1.331e-4154.78aminodeoxychorismate synthase, component I [Rhodoc... [more]
gi|1071429619|ref|WP_069854840.1|1.659e-4154.78MULTISPECIES: aminodeoxychorismate synthase, compo... [more]
gi|1210101184|dbj|BAY20314.1|1.749e-4155.41para-aminobenzoate synthase subunit I [Calothrix s... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3244rna3244Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications