EWM30206.1, cds322 (CDS) Nannochloropsis gaditana

Overview
NameEWM30206.1
Unique Namecds322
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:797576..798748 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30206.1
Productperoxisomal glycolate oxidase
Orig transcript idgnl|cribi|Naga_100003g174.1723.mrna
GeneGOX
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:797576..798748 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016491oxidoreductase activity
GO:0010181FMN binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR008259FMN_hydac_DH_AS
IPR000262FMN-dep_DH
IPR012133Alpha-hydoxy_acid_DH_FMN
IPR013785Aldolase_TIM
Homology
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|585112865|gb|EWM30206.1| (peroxisomal glycolate oxidase [Nannochloropsis gaditana])

HSP 1 Score: 806.594 bits (2082), Expect = 0.000e+0
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0
Query:    1 MDFVNHPMGAAEETVRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIPKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMVTHVVSYQSKI 390
            MDFVNHPMGAAEETVRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIPKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMVTHVVSYQSKI
Sbjct:    1 MDFVNHPMGAAEETVRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIPKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMVTHVVSYQSKI 390          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|299115220|emb|CBN74053.1| (Glycolate Oxidase [Ectocarpus siliculosus])

HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0
Identity = 275/392 (70.15%), Postives = 322/392 (82.14%), Query Frame = 0
Query:    2 DFVNHPMGAAEETVRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPI--PKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSIC-NLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMVTHVVSYQSKI 390
            D +  P+G A++T + P  AG EPVN+REFE +A+  L KNAFDYYASGANDM+TLRENRAAF RLR+RPRILRDVS VDT T+VLG  ++ PIC+APTAMQRMA   GE ATA A A+   LMTLSSWSTTS+EDVA A      +WFQLYVYKDR++T +L +RA  AGY ALA+TVDTPVLGRREAD+RNRFKLP HLTM NF  AGG+HA GTKDGG DSGLAAYVASLIDRTL W D++WLR+IC ++ IVVKGVMT EDA  +++ GVD IWVSNHGARQLDT  +TIE+LP++V AV+GRCE+YLDGG+CRGTD FKALALGA+AVFIGRPVLWGLAHSGE+GV +VL+LL  E  MA+QLTGCT++S   RSMVTH  SY SK+
Sbjct:    3 DPMTAPVGPAQDTSKAPEAAGWEPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSMVDTSTSVLGQKISSPICIAPTAMQRMAHDSGECATAGAAAKAGALMTLSSWSTTSLEDVAKAGGPGGARWFQLYVYKDRKITEQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHASGTKDGGNDSGLAAYVASLIDRTLDWNDIKWLRTICGSMKIVVKGVMTAEDAAESVRQGVDGIWVSNHGARQLDTTPATIEVLPEVVAAVSGRCEIYLDGGICRGTDVFKALALGAKAVFIGRPVLWGLAHSGEEGVSKVLKLLHDELVMALQLTGCTRVSSASRSMVTHQTSYYSKL 394          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|1214713242|gb|OWZ24143.1| (Peroxisomal (S)-2-hydroxy-acid oxidase [Phytophthora megakarya])

HSP 1 Score: 463.766 bits (1192), Expect = 4.213e-160
Identity = 226/361 (62.60%), Postives = 276/361 (76.45%), Query Frame = 0
Query:   20 GAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIP-----KWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDI 375
            G+  +P+N+ EFE YAK  LPKNA+DYYASGA++M+TL+ENR AF+RL + PR+LRDVS++D  TT+LG  V+ P+CVAP+AM RMA P+GELA+  A A+      LS+ STTS+EDVA A         +W+QLYV+KDRE+T  L +RAE+AGYKA+ +TVDTP+LG READVRN F LP HLTMANFA  GG H  G     KDSGLA YV+ L D TL W DV+WL+SI  LP+VVKGV++PEDA +A+  G + I VSNHGARQLD VA+TI+ LP IVKAV+GR EVYLDGGV RGTD FKALALGARAVF+GRPVL+GLAHSGEDGV  VL +L +E + AM  +G  KL DI
Sbjct:    7 GSDGKPLNVLEFEEYAKEYLPKNAYDYYASGADEMVTLKENREAFKRLVLHPRVLRDVSNMDISTTLLGHRVSSPVCVAPSAMHRMAHPDGELASTSATAKADACYILSTISTTSLEDVAVANSKANPNALRWYQLYVFKDREITRGLVQRAEKAGYKAIVLTVDTPMLGHREADVRNHFSLPKHLTMANFAQVGGEHEHGVSSL-KDSGLAHYVSELFDLTLNWNDVKWLKSITKLPVVVKGVLSPEDAKIAVSMGCEGILVSNHGARQLDGVAATIDALPAIVKAVDGRAEVYLDGGVRRGTDVFKALALGARAVFLGRPVLFGLAHSGEDGVSNVLRILNEELKHAMLFSGTAKLGDI 366          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|695458110|ref|XP_009537351.1| (hypothetical protein PHYSODRAFT_348294 [Phytophthora sojae] >gi|348667960|gb|EGZ07785.1| hypothetical protein PHYSODRAFT_348294 [Phytophthora sojae])

HSP 1 Score: 462.611 bits (1189), Expect = 1.190e-159
Identity = 226/366 (61.75%), Postives = 279/366 (76.23%), Query Frame = 0
Query:   20 GAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIP-----KWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMV 380
            G+   P+N+ E+E YAK  LPKNAFDYYASGA+DM+TL+ENR AF+RL + PR+LRDVS++DT TT+LG  V+ P+CVAP+AM RMA P+GE+A++ A A+      LS+ STTS+EDVA A         +W+QLYV+KDRE+T  L +RAE+AGYKA+ +TVDTP+LG RE DVRNRF LP+HLTMANFA  GG H  G  +  KDSGLA YV+ L D TL W DV+WL+SI  LP+VVKGV++PEDA +A+  G + I VSNHGARQLD VA+TI+ LP IV+AV+GR EVYLDGGV RGTD FKALALGARAVF+GRPVL+GLAHSGE GV  VL +L  E   AM  +G  KL+DI  + V
Sbjct:    7 GSDGTPLNVLEYEEYAKEYLPKNAFDYYASGADDMVTLQENREAFKRLVLHPRVLRDVSNMDTSTTLLGHRVSSPVCVAPSAMHRMAHPDGEIASSSATAKADACYILSTISTTSLEDVAVANSQANPNALRWYQLYVFKDREITRGLVKRAEKAGYKAIVLTVDTPMLGHREPDVRNRFSLPSHLTMANFAAVGGEHEHGV-NSLKDSGLAHYVSELFDLTLNWNDVKWLKSITKLPVVVKGVLSPEDAKIAVDMGCEGILVSNHGARQLDGVAATIDALPAIVQAVDGRAEVYLDGGVRRGTDVFKALALGARAVFLGRPVLFGLAHSGEAGVSNVLRILNDELRHAMLFSGTAKLADIGPAYV 371          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|675212481|ref|XP_008915125.1| (hypothetical protein PPTG_18702 [Phytophthora parasitica INRA-310] >gi|566008121|gb|ETI31032.1| hypothetical protein F443_21950 [Phytophthora parasitica P1569] >gi|567945603|gb|ETK71414.1| hypothetical protein L915_21345 [Phytophthora parasitica] >gi|567974255|gb|ETL24853.1| hypothetical protein L916_21216 [Phytophthora parasitica] >gi|568003725|gb|ETL78070.1| hypothetical protein L917_21070 [Phytophthora parasitica] >gi|568033635|gb|ETM31334.1| hypothetical protein L914_21084 [Phytophthora parasitica] >gi|568084705|gb|ETM99629.1| hypothetical protein PPTG_18702 [Phytophthora parasitica INRA-310] >gi|570311787|gb|ETO59735.1| hypothetical protein F444_21969 [Phytophthora parasitica P1976] >gi|570935571|gb|ETP00828.1| hypothetical protein F441_21835 [Phytophthora parasitica CJ01A1] >gi|570965855|gb|ETP28974.1| hypothetical protein F442_21813 [Phytophthora parasitica P10297] >gi|970657262|gb|KUF95166.1| hypothetical protein AM588_10007892 [Phytophthora nicotianae])

HSP 1 Score: 461.07 bits (1185), Expect = 5.316e-159
Identity = 225/371 (60.65%), Postives = 280/371 (75.47%), Query Frame = 0
Query:   15 VRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIP-----KWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMV 380
            V+   G+   P+N+ E+E YAK  LPKNA+DYYASGA+DM+TL+ENR AF+RL + PR+LRDVS++D  TT+LG  ++ P+CVAP+AM RMA P+GE+A+  A A+  T   LS+ STTS+EDVA A         +W+QLYV+KDRE+T  L +RAE+AGYKA+ +TVDTP+LG RE DVRNRF LP HLTMANFA  GG H  G     KDSGLA YV+ L D TL W DV+WL+SI +LP+VVKGV++PEDA +A+  G + + VSNHGARQLD VA+TI+ LP IVKAV+GR EVYLDGGV RGTD FKALALGARAVF+GRPVL+GLAHSGE GV  VL +L  E + AM  +G  KL+DI  + V
Sbjct:    2 VKIVPGSDGTPLNVLEYEEYAKEYLPKNAYDYYASGADDMVTLKENREAFKRLVLHPRVLRDVSNMDISTTLLGHRISSPVCVAPSAMHRMAHPDGEIASTSATAKADTCYILSTISTTSLEDVAKANSQANPNALRWYQLYVFKDREITRGLVKRAEKAGYKAIVLTVDTPMLGHREPDVRNRFSLPNHLTMANFAEVGGDHEHGVS-SLKDSGLAHYVSELFDLTLNWNDVKWLKSITSLPVVVKGVLSPEDAKIAVDLGCEGVLVSNHGARQLDGVAATIDALPAIVKAVDGRAEVYLDGGVRRGTDVFKALALGARAVFLGRPVLFGLAHSGEAGVSNVLRILNDELKHAMLFSGTAKLADIGPAYV 371          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|970629107|gb|KUF76481.1| (Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Phytophthora nicotianae])

HSP 1 Score: 460.299 bits (1183), Expect = 1.142e-158
Identity = 225/371 (60.65%), Postives = 280/371 (75.47%), Query Frame = 0
Query:   15 VRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIP-----KWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMV 380
            V+   G+   P+N+ E+E YAK  LPKNA+DYYASGA+DM+TL+ENR AF+RL + PR+LRDVS++D  TT+LG  ++ P+CVAP+AM RMA P+GE+A+  A A+  T   LS+ STTS+EDVA A         +W+QLYV+KDRE+T  L +RAE+AGYKA+ +TVDTP+LG RE DVRNRF LP HLTMANFA  GG H  G     KDSGLA YV+ L D TL W DV+WL+SI +LP+VVKGV++PEDA +A+  G + + VSNHGARQLD VA+TI+ LP IVKAV+GR EVYLDGGV RGTD FKALALGARAVF+GRPVL+GLAHSGE GV  VL +L  E + AM  +G  KL+DI  + V
Sbjct:    2 VKIVPGSDGTPLNVLEYEEYAKEYLPKNAYDYYASGADDMVTLKENREAFKRLVLHPRVLRDVSNMDISTTLLGHRISSPVCVAPSAMHRMAHPDGEIASTSATAKADTCYILSTISTTSLEDVAKANSQANPNALRWYQLYVFKDREITRGLVKRAEKAGYKAIVLTVDTPMLGHREPDVRNRFSLPNHLTMANFAEVGGDHEHGVS-SLKDSGLAHYVSELFDLTLNWNDVKWLKSITSLPVVVKGVLSPEDAKIAVDLGCEGVLVSNHGARQLDGVAATIDALPAIVKAVDGRAEVYLDGGVRRGTDVFKALALGARAVFLGRPVLFGLAHSGEAGVSNVLRILNDELKHAMLXSGTAKLADIGPAYV 371          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|301109870|ref|XP_002904015.1| (peroxisomal (S)-2-hydroxy-acid oxidase, putative [Phytophthora infestans T30-4] >gi|262096141|gb|EEY54193.1| peroxisomal (S)-2-hydroxy-acid oxidase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 458.759 bits (1179), Expect = 4.939e-158
Identity = 225/371 (60.65%), Postives = 278/371 (74.93%), Query Frame = 0
Query:   15 VRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAA-----APIPKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMV 380
            V+   G+   P+N+ E+E YAK  LPKNA+DYYASGA+DM+TL+ENR AF+RL + PR+LRDVS++DT TT+LG  ++ P+CVAP+AM RMA P+GE+A+  A A+  T   LS+ STTS+EDVA A         +W+QLYV+KDRE+T  L RRAE+AGYKA+ +TVDTP+LG RE DVRNRF LP HLTMANFA  GG H  G     KDSGLA YV+ L D TL W DV+WL+SI  LP+VVKGV++PEDA +A+  G + + VSNHGARQLD VA+TI+ LP I +AV GR EVYLDGGV RGTD FKALALGARAVF+GRPVL+GLAHSGE GV  VL +L  E + AM  +G  KL+DI  + V
Sbjct:    2 VKIVPGSDGTPLNVLEYEEYAKEYLPKNAYDYYASGADDMVTLKENREAFKRLVLHPRVLRDVSNMDTNTTLLGHRISSPVCVAPSAMHRMAHPDGEIASTSATAKADTCYILSTISTTSLEDVAKANRQANPHALRWYQLYVFKDREITRGLVRRAEKAGYKAIVLTVDTPMLGHREPDVRNRFSLPNHLTMANFAEVGGDHENGVS-SLKDSGLAHYVSELFDLTLNWSDVKWLKSITKLPVVVKGVLSPEDAKIAVDMGCEGVLVSNHGARQLDGVAATIDALPAIAEAVGGRAEVYLDGGVRRGTDVFKALALGARAVFLGRPVLFGLAHSGEAGVSNVLRILNDELKHAMLFSGTAKLADIGPAYV 371          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|168002982|ref|XP_001754192.1| (predicted protein [Physcomitrella patens] >gi|162694746|gb|EDQ81093.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 454.521 bits (1168), Expect = 1.227e-156
Identity = 221/360 (61.39%), Postives = 275/360 (76.39%), Query Frame = 0
Query:   21 AGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIPKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMV 380
            A  E  N+ E+E  A+  LPK  FDYYASGA D  TLRENR AFER+R RPRIL DV+ VD  T VLG  ++ PI VAPTAMQRMA P+GELATARA ++  T+MTLSSW+T+SVE+VA+  P  ++FQLYVYKDR + A+L RRAERAG+KA+A+TVDTP LGRRE+D++NRF LP+HLT+ANF G       G  D  +DSGLA+YVA  IDR+L WKDV+WL++I  LPI+VKGV+T ED  +A+Q G   I VSNHGARQLD V++TI  L ++V A  GR  V+LDGGV RGTD  KALALGA  VF+GRPV++GLA  G+ GV +VL++L+ EFE+AM L GCTK+SDI+RS +
Sbjct:    2 ATAEVTNVTEYEELARQKLPKMVFDYYASGAEDQWTLRENRNAFERIRFRPRILIDVTKVDLTTNVLGFNISMPIMVAPTAMQRMAHPDGELATARAVSKAGTIMTLSSWATSSVEEVASVGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRESDIKNRFALPSHLTLANFEGLD----LGKMDKTQDSGLASYVAGQIDRSLSWKDVKWLQTITKLPILVKGVITAEDTQLAIQSGAAGIIVSNHGARQLDYVSATISALEEVVLAARGRVPVFLDGGVRRGTDVLKALALGASGVFVGRPVVFGLATDGQKGVEKVLQMLRDEFELAMALAGCTKVSDIKRSHI 357          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|168011949|ref|XP_001758665.1| (predicted protein [Physcomitrella patens] >gi|162690275|gb|EDQ76643.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 454.521 bits (1168), Expect = 1.268e-156
Identity = 225/368 (61.14%), Postives = 280/368 (76.09%), Query Frame = 0
Query:   24 EPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIPKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMV-THVVSYQSKI 390
            E VN+ E+E  A+  LPK  +DYYASGA D  TL+ENR+AFER+R RPRIL DV+ VD  T VLG  ++ PI VAPTAMQRMA P+GELATARA A+  T+MTLSSWST+SVE+VA+  P  ++FQLYVYKDR + A+L RRAERAG+ A+A+TVDTP LGRRE+D++NRF LP HLT+ANF G       G  D  +DSGLA+YVA  IDR+L WKDV+WL+SI  LPI+VKGV+T ED  +A+Q G   I VSNHGARQLD V++TI  L ++V+A  GR  V+LDGGV RGTD  KALALGA  VFIGRPV++GLA  G+ GV +VL++L+ EFE+AM L GCTK+SDI R+ V T V  + +K+
Sbjct:    5 EIVNVSEYEELARQKLPKMVYDYYASGAEDQWTLKENRSAFERIRFRPRILIDVTKVDLSTNVLGFNISMPIMVAPTAMQRMAHPDGELATARATAKAGTIMTLSSWSTSSVEEVASVGPGIRFFQLYVYKDRNVVAQLVRRAERAGFNAIALTVDTPRLGRRESDIKNRFALPKHLTLANFEGLD----LGQMDKTQDSGLASYVAGQIDRSLSWKDVKWLQSITELPILVKGVITAEDTKLAIQNGAAGIIVSNHGARQLDHVSATISALEEVVQAAAGRLPVFLDGGVRRGTDVLKALALGASGVFIGRPVVFGLACDGQQGVEKVLQMLRDEFELAMALAGCTKVSDISRAHVQTEVERFHAKL 368          
BLAST of EWM30206.1 vs. NCBI_GenBank
Match: gi|953487542|emb|CEG48370.1| (peroxisomal-2-hydroxy-acid [Plasmopara halstedii])

HSP 1 Score: 453.366 bits (1165), Expect = 6.892e-156
Identity = 220/366 (60.11%), Postives = 277/366 (75.68%), Query Frame = 0
Query:   15 VRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIP-----KWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDI 375
            V+   G+   P+N+ E+E YA+  LPKNAFDYYASGA+DM+TL+ENR AF+RL + PR+LRDVS +D  TT+LG  V+ P+CVAP+AM RMA P+GE+A++ A A+ +    LS+ STTS+EDVA A+ +      +W+QLYV+KDRE+T  L  RAE++GYKA+ +TVDTP LG RE DVRNRF LP HLTMANF   GG H +G     +DSGLA YV+ L D TL W DV+WL+SI  LPIVVKGV++PEDA +A+  G + I VSNHGARQLD VA+TI+ LP IVKAV+GR EVY+DGG+ RGTD FKALALGARAVFIGRP+L+GLAHSGE GV  VL +L  E + AM  +G  +L+DI
Sbjct:    2 VKIVPGSEATPLNVLEYEEYAREYLPKNAFDYYASGADDMVTLKENREAFKRLVLLPRVLRDVSRIDISTTLLGHHVSSPVCVAPSAMHRMAHPDGEIASSSATAKAKCCYILSTISTTSLEDVADASSLADPCALRWYQLYVFKDREITRNLVHRAEKSGYKAIVLTVDTPKLGHREPDVRNRFSLPNHLTMANFTRVGGEHEKGVC-SNEDSGLAHYVSELFDLTLNWNDVKWLKSITELPIVVKGVLSPEDAKIAVGLGCEGILVSNHGARQLDGVAATIDALPAIVKAVDGRAEVYMDGGIRRGTDVFKALALGARAVFIGRPILFGLAHSGEAGVINVLRILTDELKHAMLFSGTARLADI 366          
The following BLAST results are available for this feature:
BLAST of EWM30206.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112865|gb|EWM30206.1|0.000e+0100.00peroxisomal glycolate oxidase [Nannochloropsis gad... [more]
gi|299115220|emb|CBN74053.1|0.000e+070.15Glycolate Oxidase [Ectocarpus siliculosus][more]
gi|1214713242|gb|OWZ24143.1|4.213e-16062.60Peroxisomal (S)-2-hydroxy-acid oxidase [Phytophtho... [more]
gi|695458110|ref|XP_009537351.1|1.190e-15961.75hypothetical protein PHYSODRAFT_348294 [Phytophtho... [more]
gi|675212481|ref|XP_008915125.1|5.316e-15960.65hypothetical protein PPTG_18702 [Phytophthora para... [more]
gi|970629107|gb|KUF76481.1|1.142e-15860.65Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Phyto... [more]
gi|301109870|ref|XP_002904015.1|4.939e-15860.65peroxisomal (S)-2-hydroxy-acid oxidase, putative [... [more]
gi|168002982|ref|XP_001754192.1|1.227e-15661.39predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|168011949|ref|XP_001758665.1|1.268e-15661.14predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|953487542|emb|CEG48370.1|6.892e-15660.11peroxisomal-2-hydroxy-acid [Plasmopara halstedii][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna322rna322Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications