EWM27445.1, cds3219 (CDS) Nannochloropsis gaditana

Overview
NameEWM27445.1
Unique Namecds3219
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1049495..1050991 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27445.1
Productbasic helix-loop-helix family protein
Orig transcript idgnl|cribi|Naga_100107g6.4499.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1049495..1050991 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0033699DNA 5'-adenosine monophosphate hydrolase activity
GO:0003677DNA binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR001310Histidine_triad_HIT
IPR026963Aprataxin
IPR011146HIT-like
Homology
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|585109700|gb|EWM27445.1| (basic helix-loop-helix family protein [Nannochloropsis gaditana])

HSP 1 Score: 1035.02 bits (2675), Expect = 0.000e+0
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0
Query:    1 MKRATDKDVQSSVGDRATAKRSCALTNGAAANDREPAVVTLAIPNFGPAERVNASLQILTTSVANFLDSKFIVRLNESVGVLKPSKFVLELVVVKEAPDGDAAKLAARAGYVTRAMTCTITKPRQRLHQGEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHKAEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSNSLQCTYETLIRVFLEQLVGKVTLPQVLPQKMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGCESMNINSSESH 498
            MKRATDKDVQSSVGDRATAKRSCALTNGAAANDREPAVVTLAIPNFGPAERVNASLQILTTSVANFLDSKFIVRLNESVGVLKPSKFVLELVVVKEAPDGDAAKLAARAGYVTRAMTCTITKPRQRLHQGEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHKAEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSNSLQCTYETLIRVFLEQLVGKVTLPQVLPQKMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGCESMNINSSESH
Sbjct:    1 MKRATDKDVQSSVGDRATAKRSCALTNGAAANDREPAVVTLAIPNFGPAERVNASLQILTTSVANFLDSKFIVRLNESVGVLKPSKFVLELVVVKEAPDGDAAKLAARAGYVTRAMTCTITKPRQRLHQGEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHKAEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSNSLQCTYETLIRVFLEQLVGKVTLPQVLPQKMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGCESMNINSSESH 498          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|553183624|ref|XP_005853932.1| (purine nucleoside phosphoramidase, partial [Nannochloropsis gaditana CCMP526] >gi|553193742|ref|XP_005855826.1| purine nucleoside phosphoramidase, partial [Nannochloropsis gaditana CCMP526] >gi|422293235|gb|EKU20535.1| purine nucleoside phosphoramidase, partial [Nannochloropsis gaditana CCMP526] >gi|422295130|gb|EKU22429.1| purine nucleoside phosphoramidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 376.711 bits (966), Expect = 4.103e-127
Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 0
Query:  213 LAMPPCQALASVLPDDWSNSLQCTYETLIRVFLEQLVGKVTLPQVLPQKMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLR 394
            LAMPPCQALASVLPD WSNSLQCTYETLIRVFLEQLVGKVTL QVLPQKMDSKTE NSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLR
Sbjct:    1 LAMPPCQALASVLPDGWSNSLQCTYETLIRVFLEQLVGKVTLRQVLPQKMDSKTEVNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLR 182          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|553183616|ref|XP_005853931.1| (aprataxin, partial [Nannochloropsis gaditana CCMP526] >gi|553193739|ref|XP_005855825.1| aprataxin, partial [Nannochloropsis gaditana CCMP526] >gi|422293234|gb|EKU20534.1| aprataxin, partial [Nannochloropsis gaditana CCMP526] >gi|422295129|gb|EKU22428.1| aprataxin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 170.244 bits (430), Expect = 2.683e-48
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
Query:  398 HSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIP 478
            HSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIP
Sbjct:    1 HSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIP 81          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|552924909|gb|ESA08827.1| (hypothetical protein GLOINDRAFT_208027 [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 155.992 bits (393), Expect = 2.330e-40
Identity = 80/188 (42.55%), Postives = 122/188 (64.89%), Query Frame = 0
Query:  302 GGGWHGALIRYLDHTPEL--RHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISR-LHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQ-KTIPDLKQHVK 485
             GGW+  L+ Y    PE+  +  ++Y  +E++ I+D YPKAK HLL+IP+ +   I+++ EL   K N ++ R L    + +  K++++   L  RMG+H++PSLR LH+H++SQDF SP+LK K+HWNSFTT FF+D+ ++E  L+  G+V       E LLK  L+CH C A   K IPDLK+H++
Sbjct:   82 SGGWNNVLLPYC-QKPEMFPKSEVYYYDNEFVIIFDKYPKAKNHLLVIPRKQ---IDNIGELK--KQNLELVRALKEKGQWVIEKMKQENPKLFFRMGFHAVPSLRQLHMHVISQDFISPSLKNKKHWNSFTTEFFIDVEEIERILEKQGEVKFNKAYYEDLLKSPLKCHLCDAKSIKFIPDLKKHLE 263          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|1026977804|ref|XP_016608849.1| (hypothetical protein, variant [Spizellomyces punctatus DAOM BR117] >gi|907095145|gb|KND00810.1| hypothetical protein, variant [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 155.992 bits (393), Expect = 9.171e-38
Identity = 117/374 (31.28%), Postives = 173/374 (46.26%), Query Frame = 0
Query:  123 PRQRLHQGEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHK-AEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSNS------LQCTYETLIRVFLEQLVGKVTLPQVLPQKMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKP--EFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGC 487
            PR R+ QG+I  +   T      + I V  S  + P+         + AG +L  +A+ L+ K AE G  YP+ +  +S L + + VE V+  + P   L    PD  SN       L+  Y+ +   F + L G  T  +    K       +    P SL   E D  + P             GG W+ AL  Y  H  +    +       + I D YPKAK HLL++P+   + L + S  +L        +  +   A  +  ++ K    L  R+G+H++PS+R LH+H++SQDFDS ALK K+HWNSFT+ FFLD   V + L   G+V       EA+LK  L CH C    + IP LK+H+  C
Sbjct:  233 PRFRVIQGDISRM--HTSQGLACRAIVVETSWRWKPSATASCKAVHERAGVELMQSAKQLYPKPAEIGKAYPVPVESTSPLFMDEHVEQVIHVVGP--NLNPKRPDCLSNDDDAVAKLETVYKAIFNSFAD-LRGLTTSDRTTDTKNAFSVLMSQPRTPVSLGD-EADVADMPK-----------SGGRWNDALRPYCLHPEQHPQDVLSYDDHLVVIRDKYPKAKKHLLILPRQPRDGLAVLSREDLP------LLDSMKRKADEVVNEMRKKDASLEFRIGFHAIPSMRQLHMHVISQDFDSAALKNKKHWNSFTSQFFLDFDTVRSMLDAKGQVRYNEATYEAMLKGPLLCHRCKTECRNIPSLKKHIAEC 583          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|1026977814|ref|XP_016608850.1| (hypothetical protein SPPG_03918 [Spizellomyces punctatus DAOM BR117] >gi|907095146|gb|KND00811.1| hypothetical protein SPPG_03918 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 156.377 bits (394), Expect = 2.932e-37
Identity = 117/374 (31.28%), Postives = 173/374 (46.26%), Query Frame = 0
Query:  123 PRQRLHQGEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHK-AEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSNS------LQCTYETLIRVFLEQLVGKVTLPQVLPQKMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKP--EFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGC 487
            PR R+ QG+I  +   T      + I V  S  + P+         + AG +L  +A+ L+ K AE G  YP+ +  +S L + + VE V+  + P   L    PD  SN       L+  Y+ +   F + L G  T  +    K       +    P SL   E D  + P             GG W+ AL  Y  H  +    +       + I D YPKAK HLL++P+   + L + S  +L        +  +   A  +  ++ K    L  R+G+H++PS+R LH+H++SQDFDS ALK K+HWNSFT+ FFLD   V + L   G+V       EA+LK  L CH C    + IP LK+H+  C
Sbjct:  425 PRFRVIQGDISRM--HTSQGLACRAIVVETSWRWKPSATASCKAVHERAGVELMQSAKQLYPKPAEIGKAYPVPVESTSPLFMDEHVEQVIHVVGP--NLNPKRPDCLSNDDDAVAKLETVYKAIFNSFAD-LRGLTTSDRTTDTKNAFSVLMSQPRTPVSLGD-EADVADMPK-----------SGGRWNDALRPYCLHPEQHPQDVLSYDDHLVVIRDKYPKAKKHLLILPRQPRDGLAVLSREDLP------LLDSMKRKADEVVNEMRKKDASLEFRIGFHAIPSMRQLHMHVISQDFDSAALKNKKHWNSFTSQFFLDFDTVRSMLDAKGQVRYNEATYEAMLKGPLLCHRCKTECRNIPSLKKHIAEC 775          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|299115363|emb|CBN74191.1| (FHA-HIT protein [Ectocarpus siliculosus])

HSP 1 Score: 150.214 bits (378), Expect = 3.160e-36
Identity = 84/203 (41.38%), Postives = 123/203 (60.59%), Query Frame = 0
Query:  290 IPVYQH-PGQPLQGGG-WHGALIRYLDHTP---ELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGC 487
            +P Y+  P  P++G G W   L +YL   P   EL+  +++  ++ + +YDGYPK++ HLLL+PKP+FL +   +EL  D+H   + +LH+ A  +A  L +   G+ +R GYH +PSL PLH+HI+SQDFDS  L  ++HWNSFTT FFLD   VE  L   G + +  E  +AL    LRC  C +    +  LK+H+ GC
Sbjct:  265 LPEYRRTPPTPVKGAGHWKAVLFQYLKDEPMPVELQREVYFSDNQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELRRDEHLSSLRQLHATATAVAEALSQQGAGV-IRCGYHGIPSLEPLHLHIISQDFDSERLTKRKHWNSFTTDFFLDASWVEARLLERGSLGLDKERLKALEATPLRCFRCHSPMTNMTKLKEHLLGC 466          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|1190996629|ref|XP_020878909.1| (transcription factor bHLH140 isoform X1 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 151.754 bits (382), Expect = 7.514e-36
Identity = 113/380 (29.74%), Postives = 179/380 (47.11%), Query Frame = 0
Query:  130 GEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHKAEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSN-------SLQCTYETLIRVFLEQLVGKVTLPQVLPQ----------KMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGG--GWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQI-SRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGCES 489
            G+I  L  E  G  +  VIA   +    P    V    FK AGP L    R+  +   PG    + L  +  L   +G+ +V+  + P   +    PD+ +N       +L+  Y +L   FL  +  +  LP+   Q          K DS+    +     S DK   +++ES  +   +  G+ +  G   W  AL     H     + +   +   + I D YPKA+ H+L++ + E  +++ + ++   K N Q+   +H+       + + +   L  R+GYHS+PS+R LH+H++SQDFDS +LK K+HWNSFT+ FF D + V   ++  GK  V  ED   LLK  LRC+ C +    IP LK HV+ C S
Sbjct:  315 GDITKLRSE--GGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLEAATRVRANTLLPGKAAVVPLPSTCPLHNAEGITHVIHVLGP--NMNPNRPDNLNNDYTKGCKTLREAYTSLFEGFLSVVQDQSKLPKRSNQTALSDSGEDIKEDSER---NKKYKGSQDKAVTNNLESGSLEDTRDSGKKMSKGWSTWALALHSIAMHPERHENVVLEFSDNIVVINDQYPKARKHVLVLARQE--SLDGLEDVR--KENLQLLQEMHNVGLKWVDRFQNEDASLIFRLGYHSVPSMRQLHLHVISQDFDSDSLKNKKHWNSFTSSFFRDSVDVLEEVKSQGKANVASED---LLKGELRCNRCRSAHPNIPKLKSHVRNCRS 680          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|1109156424|ref|XP_019084607.1| (PREDICTED: transcription factor bHLH140-like isoform X4 [Camelina sativa])

HSP 1 Score: 150.599 bits (379), Expect = 1.610e-35
Identity = 116/381 (30.45%), Postives = 181/381 (47.51%), Query Frame = 0
Query:  130 GEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHKAEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSN-------SLQCTYETLIRVFLEQLVGKVTLPQVLPQ----------KMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPL--QGGGWHGALIRYLDHTPELRHFIFYETSE-WMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQI-SRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGCES 489
            G+I  L  E  G  +  VIA   +    P    V    FK AGP L    R+  +   PG    + L  +  L   +G+ +V+  + P   +    PD+ SN       +L+  Y +L   FL  +  +   P+   Q          K DS+    +     S DK   +++ES  +   +  G+ +  +   W  AL     H PE    +  E S+  + I D YPKA+ H+L++ + E  +++ + ++   K N Q+   +H+       + + +   L  R+GYHS+PS+R LH+H++SQDFDS +LK K+HWNSFT+ FF D + V   ++  GK  V  ED   LLK  LRC+ C +    IP LK HV+ C S
Sbjct:  304 GDITKLRSE--GGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLLNAEGITHVIHVLGP--NMNPNRPDNLSNDYTKGCKTLREAYTSLFEGFLSVVQDQSKFPKRSNQTAVSDSGEHIKEDSE---RNKKYKGSQDKAVTNNMESGSLEDTRDSGKKMSKEWSTWALALHTIAMH-PERHENVVLEFSDNIVVINDQYPKARKHVLVLARQE--SLDGLEDVR--KENLQLLQEMHNVGLKWVDRFQNEDASLIFRLGYHSVPSMRQLHLHVISQDFDSDSLKNKKHWNSFTSSFFRDSVDVLEEVKSQGKANVASED---LLKGELRCNRCRSAHPNIPKLKSHVRSCRS 669          
BLAST of EWM27445.1 vs. NCBI_GenBank
Match: gi|1109156422|ref|XP_019084606.1| (PREDICTED: transcription factor bHLH140-like isoform X3 [Camelina sativa])

HSP 1 Score: 150.599 bits (379), Expect = 1.652e-35
Identity = 116/381 (30.45%), Postives = 181/381 (47.51%), Query Frame = 0
Query:  130 GEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHKAEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSN-------SLQCTYETLIRVFLEQLVGKVTLPQVLPQ----------KMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPL--QGGGWHGALIRYLDHTPELRHFIFYETSE-WMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQI-SRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGCES 489
            G+I  L  E  G  +  VIA   +    P    V    FK AGP L    R+  +   PG    + L  +  L   +G+ +V+  + P   +    PD+ SN       +L+  Y +L   FL  +  +   P+   Q          K DS+    +     S DK   +++ES  +   +  G+ +  +   W  AL     H PE    +  E S+  + I D YPKA+ H+L++ + E  +++ + ++   K N Q+   +H+       + + +   L  R+GYHS+PS+R LH+H++SQDFDS +LK K+HWNSFT+ FF D + V   ++  GK  V  ED   LLK  LRC+ C +    IP LK HV+ C S
Sbjct:  305 GDITKLRSE--GGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLLNAEGITHVIHVLGP--NMNPNRPDNLSNDYTKGCKTLREAYTSLFEGFLSVVQDQSKFPKRSNQTAVSDSGEHIKEDSE---RNKKYKGSQDKAVTNNMESGSLEDTRDSGKKMSKEWSTWALALHTIAMH-PERHENVVLEFSDNIVVINDQYPKARKHVLVLARQE--SLDGLEDVR--KENLQLLQEMHNVGLKWVDRFQNEDASLIFRLGYHSVPSMRQLHLHVISQDFDSDSLKNKKHWNSFTSSFFRDSVDVLEEVKSQGKANVASED---LLKGELRCNRCRSAHPNIPKLKSHVRSCRS 670          
The following BLAST results are available for this feature:
BLAST of EWM27445.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109700|gb|EWM27445.1|0.000e+0100.00basic helix-loop-helix family protein [Nannochloro... [more]
gi|553183624|ref|XP_005853932.1|4.103e-12798.35purine nucleoside phosphoramidase, partial [Nannoc... [more]
gi|553183616|ref|XP_005853931.1|2.683e-48100.00aprataxin, partial [Nannochloropsis gaditana CCMP5... [more]
gi|552924909|gb|ESA08827.1|2.330e-4042.55hypothetical protein GLOINDRAFT_208027 [Rhizophagu... [more]
gi|1026977804|ref|XP_016608849.1|9.171e-3831.28hypothetical protein, variant [Spizellomyces punct... [more]
gi|1026977814|ref|XP_016608850.1|2.932e-3731.28hypothetical protein SPPG_03918 [Spizellomyces pun... [more]
gi|299115363|emb|CBN74191.1|3.160e-3641.38FHA-HIT protein [Ectocarpus siliculosus][more]
gi|1190996629|ref|XP_020878909.1|7.514e-3629.74transcription factor bHLH140 isoform X1 [Arabidops... [more]
gi|1109156424|ref|XP_019084607.1|1.610e-3530.45PREDICTED: transcription factor bHLH140-like isofo... [more]
gi|1109156422|ref|XP_019084606.1|1.652e-3530.45PREDICTED: transcription factor bHLH140-like isofo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3227rna3227Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications