EWM27446.1, cds3217 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|585109701|gb|EWM27446.1| (hypothetical protein Naga_100107g4 [Nannochloropsis gaditana]) HSP 1 Score: 1053.89 bits (2724), Expect = 0.000e+0 Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0 Query: 1 MSGKARLQRLGIIKLAFVGVVCLPLLLGHTVAFLIQVHTCSTTNPSSSLRIGFTRKACLVAASTLTGSRTRPRRRDLKIGKPRPEVPDEAGDDDDSEGGGGKRWVRVYPLGLGSYGGQTAVFLGRRKEVEKENGGRLEALPVPVFTSGDLEMLQAAFREAERRRKTEAEGLQNSRGSKSQFKASSMWTGRHLSTKDNGFFDNAPWEWAERMAREAGESGQSVPTVAATNVKKEAFDAFVFGKNVRADWTSSPYALMLHVITRALGAAVSELLIDEEDSPRGPGITFGPVLTLQEEVGTAPSEQGRAMLVDCLIDEVVGFALALNRAIKMPVDLYEGTAVASRVLGRGSDDGILQLEAVGEGEEAAERRKENMMTVMENVRPAWEISSVEAFRSMDSRSKRLCLIKSGADAIPKRRQGPQELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLRSRRT 520 MSGKARLQRLGIIKLAFVGVVCLPLLLGHTVAFLIQVHTCSTTNPSSSLRIGFTRKACLVAASTLTGSRTRPRRRDLKIGKPRPEVPDEAGDDDDSEGGGGKRWVRVYPLGLGSYGGQTAVFLGRRKEVEKENGGRLEALPVPVFTSGDLEMLQAAFREAERRRKTEAEGLQNSRGSKSQFKASSMWTGRHLSTKDNGFFDNAPWEWAERMAREAGESGQSVPTVAATNVKKEAFDAFVFGKNVRADWTSSPYALMLHVITRALGAAVSELLIDEEDSPRGPGITFGPVLTLQEEVGTAPSEQGRAMLVDCLIDEVVGFALALNRAIKMPVDLYEGTAVASRVLGRGSDDGILQLEAVGEGEEAAERRKENMMTVMENVRPAWEISSVEAFRSMDSRSKRLCLIKSGADAIPKRRQGPQELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLRSRRT Sbjct: 1 MSGKARLQRLGIIKLAFVGVVCLPLLLGHTVAFLIQVHTCSTTNPSSSLRIGFTRKACLVAASTLTGSRTRPRRRDLKIGKPRPEVPDEAGDDDDSEGGGGKRWVRVYPLGLGSYGGQTAVFLGRRKEVEKENGGRLEALPVPVFTSGDLEMLQAAFREAERRRKTEAEGLQNSRGSKSQFKASSMWTGRHLSTKDNGFFDNAPWEWAERMAREAGESGQSVPTVAATNVKKEAFDAFVFGKNVRADWTSSPYALMLHVITRALGAAVSELLIDEEDSPRGPGITFGPVLTLQEEVGTAPSEQGRAMLVDCLIDEVVGFALALNRAIKMPVDLYEGTAVASRVLGRGSDDGILQLEAVGEGEEAAERRKENMMTVMENVRPAWEISSVEAFRSMDSRSKRLCLIKSGADAIPKRRQGPQELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLRSRRT 520
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|298712627|emb|CBJ48652.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 148.288 bits (373), Expect = 6.596e-36 Identity = 133/433 (30.72%), Postives = 197/433 (45.50%), Query Frame = 0 Query: 103 RWVRVYPLGLGSYGGQTAVFLGRRKEVEKENGGRLEALPVPVFTSGDLEMLQAAFREAERRRKTEAEGLQNSRGSKSQFKASSMWTGRHLSTKDNGFFDNAPWEWA-------ERMAREAGESGQSVPTVAATNVKKEAFDAFVFGKNVRADWTSSPYALMLHVITRALGAAVSELLIDEEDSPRGPGITFGPVLTLQEEVGTAPSEQGRA---MLVDCLIDEVVGFALALNRAIKMPVDLYEGTAVASRVLGRGSDDGILQLEAVGEGEEAAERRKENMMTVMENVRPAWEISSVEAFRSMDSRSKRLCLIKSGADAIPKRR-----QGP-QELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLRSRR 519 R+ +P+GLG Y G AVFL ++ + R E LP+P+ E EA + R A + T L ++ G +DN PWEW+ E R G+ + + V + +A S Y L+ V T A + L ++EE+S G GIT G L+ P +GR +++ DE VG ALAL R + + +++EG V + + G D L L+ V EG + + + V PAW I S A M KR CL +G P++R + P ++L+ +LP +DE VRR+ +A A D++T L A KSER V ++L+AAL + + + + L + L +MDPTQDEGSYQ+DLD D+WY RR Sbjct: 21 RFAACWPVGLGQYNGGPAVFLANKRRILDP---REEVLPIPI-----PEEAAPLLSEAMQPRDVSV--------------AVLLRTCSPLFGRNGGMYDNIPWEWSGDDMAKREAFQRSQGKGMMDMGAIVGGGGGGGGGGDSVTQQQTQA--FGSAYGLLADVATTLCPADILSLFVEEEESGAG-GITLGASAYLRRR----PDAEGRGGQRSIIEVTTDEAVGVALALGRQVYVDEEIWEGGRVRVKFVMDG-DKMRLDLDNV-EGRDLSSTSDKEAPPVQP---PAWTIKSRGALSRMSVEEKRECLRATGVRP-PRKRALSESEDPDRDLEDLMLPRMDEAVRRDVLMARAWREGDFATAGELCAGKSERHIVAEQLQAALKDNDQDLASILMQRLEILESCRMDPTQDEGSYQRDLDVDEWYEADRR 418
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|873222848|emb|CEM30243.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 122.094 bits (305), Expect = 3.190e-26 Identity = 126/458 (27.51%), Postives = 205/458 (44.76%), Query Frame = 0 Query: 97 EGGGGKR---WVRVYPLGLGSYGGQTAVFLGRRKEVEKENG---GRLEALPV---PVFTSGDLEMLQAAFREAERRRKTEAEGLQNSRGSKSQFKASSMWTGRHLSTK------DNGFFDNAPWEWAERMAREAGESGQSVPTVAATNVKKEAFDAFVFGK----NVRADWTSSPYALMLHVITRALGAAVSELLIDEEDSPR---GPGIT---------FGPVLTLQEEVGTAPSEQGRAMLVDCLIDEVVGFALALNRAIKMPVDLYEGTAVASRVLGRGSDDGILQLE---AVGEGEEAAERRKENMMTVMENV-RPAWEISSVEAFRSMDSRSKRLCLIKSGADA-IPKR--RQGPQELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLR 516 EG G R +V + +G+G Y QT FL + + G LP+ P T+ E L + R L R + A+ + T R L+ + G FD P+EW++ G+S+ +++ FDA G+ N R T YA +L L A E+ I+ D+P G G++ ++ L E+ P+ G+ ++ DE +G A L + I + L++ A+ ++ DG L++ A+ G A E E +++ + + A E+ SV+ F MD KR C++ S A +P+R + +++ LL +DE VRR+ I A ER D+ + L A+KS+R ++K+ ++ A G+ A L+E LT+AK D T +EGSY + LDQD+WY R Sbjct: 27 EGRGTDRQSQFVEAFLVGIGEYRNQTCAFLSQSPPLSASAGVVDPSARVLPILIAPQRTNVLREALAQTLEQYSRPESPSTGPLAVERKAPVDSSATRVVTARDLTVSPMELGYNLGLFDTLPYEWSD--------EGRSIG-------QRKIFDALYVGQGPFWNRRTFQTQ--YAALLAAAREVLRAEAKEVYIESIDTPTSLAGVGLSVAGYVRLTQLSEMMVLMGELVPKPATGGKEVVAQASRDEAIGIATVLRQPIHVQRSLWDKLALKAQF---KLLDGALKISIDPALAAGSLAPEDLDEE--GIIDRLGKKAVEVRSVDEFEGMDDGDKRRCILASNPLARLPRRGSEESQSKVEDMLLNLMDEAVRRQVMIKRASERGDFQLAARLVADKSDRQQIKELMQEAADAGDYKTAAELKERLEVLTMAKWDVTAEEGSYSRFLDQDEWYAR 462
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|551625663|ref|XP_005792938.1| (hypothetical protein EMIHUDRAFT_108455 [Emiliania huxleyi CCMP1516] >gi|485647347|gb|EOD40509.1| hypothetical protein EMIHUDRAFT_108455 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 84.7297 bits (208), Expect = 1.758e-13 Identity = 74/212 (34.91%), Postives = 100/212 (47.17%), Query Frame = 0 Query: 306 AMLVDCLIDEVVGFALALNRAIKMPVDLYEGTAVASRVLGRGSDDGILQLEAVGEGEEAAERRKENMMTVMENVRPAWEISSVEAFRSMDSRSKRLCLIKSGADAIPKRRQGPQELDIALL-PYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLR 516 A L +C DE +G ALAL + + ++EG A R G ++LE + E AE + WEISS + S+ K +++G +P+RR+ E LL P LDE VRR + A+E D +ALEA S RG++ LR A+ E A L E T + D TQDEG Y + LDQDDWY R Sbjct: 1625 ATLCECTADEALGVALALGCRVLVDARVWEGGRTAPRY---SEQRGKMRLEVMPRTAERAEGEEGGEGERRPPPPLPWEISSADELLSLSLEDKARSALRAGLR-LPRRREATNEALTQLLEPLLDEDVRRRLAMRRALEEGDVGAAAALEAGSSRRGQLLAALRRAVDEERYGEAAELSLELRVETSRRADVTQDEGGYDRYLDQDDWYAR 1832
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|922855748|gb|KOO24168.1| (hypothetical protein Ctob_000228 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 76.6406 bits (187), Expect = 6.871e-12 Identity = 82/265 (30.94%), Postives = 126/265 (47.55%), Query Frame = 0 Query: 257 LHVITRALGAAVSELLIDEEDSP-RGPGITFGPVLTLQEEVGTAPSEQGRAMLVDCLIDEVVGFALALNRA-IKMPVDLYEGTAVASRVLGRGSDDGILQLEAVGEGEEAAERRKENMMTVMENVRP-AWEISSVEAFRSMDSRSKRLCLIKSGADAIPKRRQGPQELDIALL-PYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLRS 517 + + R A V ++I+ D G + G + L V AP+ + L +C++DE +G ALA + + ++E A R G +++E +G EA + ++E + P WEI S S+ + L +++G +P+ R ALL P LDE VRR+ R+ A++ D T +AL+A+ S RGR+ LR A+ E + L E T +MD T DEG+Y LDQDDWY RS Sbjct: 1 MDAMQREANAKVKRVVIERSDLLLAGSTLILGACVWLDPVV--APAASAESELCECVVDEALGLALAATAGQVHVERLVWEAAATQPRY---SEQRGKMRME-LGRLREAEDGKEEGVSEPGGAFVPLPWEIRSFAELESLTLEERALSALRAGL-RLPRPRDATSVTITALLEPLLDEDVRRQVRLRRALDMGDVGTAAALDASTSTRGRLLASLRLAVEEERYGEASELAIEISIETSRRMDVTLDEGTYDPFLDQDDWYARS 258
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|551663738|ref|XP_005834633.1| (hypothetical protein GUITHDRAFT_106641 [Guillardia theta CCMP2712] >gi|428178779|gb|EKX47653.1| hypothetical protein GUITHDRAFT_106641 [Guillardia theta CCMP2712]) HSP 1 Score: 75.0998 bits (183), Expect = 6.397e-11 Identity = 67/215 (31.16%), Postives = 101/215 (46.98%), Query Frame = 0 Query: 317 VGFALALNRAIKMPVDLYEGTAVASRVLGRGSDDGILQLEAVGEGEEAAERRKENMMTVMENVRPA---------------WEISSVEAFRSMDSRSKRLCLIKSGADAIPKRRQGPQELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLR 516 V FA + + D+Y+ T R++ G D+G ++ + A R + M VR + WE+ + + +M R L + G + K + +EL+ +LP +DE RR I AVERED+ T S L AN+S RGR+ + A+ E A L+EE +T+ + D TQDEGSY LD DDWY++ Sbjct: 181 VAFATKFGSPVYIRKDIYKETCC--RIVNLG-DEGERNKFSIDGSQPVAWRTPKTAEKFMFRVRESQKNAKIREEALRKKTWEMKASDLL-AMSVEQLRFILAEQGVPSSSKATK--EELEDLVLPGMDEVERRIVMIQRAVEREDYGTASQLAANQSRRGRIAAAIVEAVREERYYEAAELQEELEVITMGRADITQDEGSYDPYLDADDWYVK 389
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|1072230303|gb|OEU15036.1| (hypothetical protein FRACYDRAFT_269192 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.1662 bits (165), Expect = 9.076e-10 Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = 0 Query: 385 ISSVEAFRSM--DSRSKRLCLIKSGADAIP------KRRQGPQELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLRSRR 519 I S+ + S+ + ++K L I + ++ +P K R G LD LLP +DE+VR E +I A+ D + V L+A +S + K++ AA+ EGN + + + E L + D TQDEG Y + LD+DDWY R R+ Sbjct: 13 IQSIGEYDSLTNEDKAKTLLEISNFSERLPRPRTVRKARAGENPLDKLLLPRIDESVRNEFKIRDALRLGDVNLVDELKAKRSNLQKAKEKAAAAMNEGNENLANKWDNEAQFLETLRADVTQDEGEYSRFLDRDDWYERDRQ 155
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|219129868|ref|XP_002185101.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403596|gb|EEC43548.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 65.4698 bits (158), Expect = 7.812e-9 Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 0 Query: 385 ISSVEAFRSMDSRSK-RLCLIKSGADA-IPKRRQGPQE--------LDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLRSRR 519 I S+ + +M + K R+ + S D +P+ R Q LD LLP +DE+VRR+ +I A ++ D V L KS+R K++ A + V E E L + D TQDEGSY + LD+DDWY RSR+ Sbjct: 19 IQSLSQYDNMSNEDKARVLMALSNFDGKLPRPRTVRQSQRMGAGNALDALLLPLVDESVRRQYQIRDATQKGDMDLVRTLTEEKSQRQIAKEKAEQAREKQADDVADWWEAEAEFLEALRADATQDEGSYSRFLDRDDWYERSRQ 163
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|219125249|ref|XP_002182897.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405691|gb|EEC45633.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 68.9366 bits (167), Expect = 1.097e-8 Identity = 83/330 (25.15%), Postives = 136/330 (41.21%), Query Frame = 0 Query: 251 SPYALMLHVITRALGAAV-----------------SELLIDEEDSPRGPGITFGPVLTLQ---EEVGTAPSEQGRAMLVDCLIDEVVGFALALNRAIKMPVDLYEGTAVASRVLGRGSD--DGILQ-------LEAVGEGEEAAE------------RRKENMMTVMENVRPAWE----------ISSVEAFRSMDSRSK-RLCLIKSGADA-IPKRRQGPQE--------LDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLRSRR 519 SPY L+ ++ L A V S +LI + + G +T+ EE G G ++V+C DE + + A + +++ + E ++ ++ +G S+ +L+ L + EG+ E R ++ + PA I S+ + +M + K R+ + S D +P+ R Q LD LLP +DE+VRR+ +I A ++ D V L KS+R K++ A + V E E L + D TQDEGSY + LD+DDWY RSR+ Sbjct: 387 SPYDLLRQILKEQLNAEVIGSVLENTSLLEGTTSLSGVLILRRVAAQKSAKLLGEEVTVSDEDEEFGNPGIRGGELVVVECDADEAIAMSFACDVPLQVETSILEVASLMAQPVGGWSESRQDLLEWTSLNPELSVLVEGQAGNELSTERASPLRIPRTTSSLFDTVTQDPPASASKDLFPTDNPIQSLSQYDNMSNEDKARMLMALSNFDGKLPRPRTVRQSQRMGAGNALDALLLPLVDESVRRQYQIRDATQKGDMDLVRTLTEEKSQRQIAKEKAEQAREKQADDVADWWEAEAEFLEALRADATQDEGSYSRFLDRDDWYERSRQ 716
BLAST of EWM27446.1 vs. NCBI_GenBank
Match: gi|224010259|ref|XP_002294087.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970104|gb|EED88442.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 68.5514 bits (166), Expect = 1.655e-8 Identity = 86/357 (24.09%), Postives = 139/357 (38.94%), Query Frame = 0 Query: 250 SSPYALMLHVITRALGAAVSELLIDEEDSPRGPGITFGPVL----------TLQEEVGTAPSEQG---------RAM-LVDCLIDEVVGFALALNRAIKMPVDLYEGTA---------VASRVLGRGSD-----DGILQLEAVG-----------------EGEEAAERRKENMM------------------TVMENVRPAWE----ISSVEAFRSM--DSRSKRLCLIKSGADAIPKRR---------------QGPQELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLDQDDWYLR 516 +SPY L++ VI L + V ++++ G + G +L TL E ++ R+M LV+C DE +G ALAL + + +++ G V S + D I QL V EG+ ++ N + + + + P + + S++ + S+ D + + L + S +P+ R Q P LD LLP +DE+VRR+ I A R D +AL A S R ++ RAA G ++LE++ + D TQDEGSY + LD+D+WY R Sbjct: 486 ASPYELLIDVINDQLNSEVIGCVLEQTSLLEGNKVLGGALLLQRKGRMKSTTLAGETVKYNDDEDDFGNEGVLRRSMYLVECFTDEAIGVALALEAPVYLEKEIWAGAGDVSVEIDVEVISSIKAENGDATSSVKDIGQLSVVNRLPLIRPLGGHCFSSKVEGDRVQSEKESNSIRIPLATTSQYFNQPGQVRLIQQRITPVFSTFNPVQSLDEYDSLSNDDKVRLLLKLNSFQGVLPRPRVVKASVSSQDIFRESQPPSALDDILLPLVDESVRRQYLIRDAEARNDVEEANALRAEMSPRQTALEQARAARDVGLEDEASKLEDDAELYKSLRADITQDEGSYSQFLDRDEWYER 842 The following BLAST results are available for this feature:
BLAST of EWM27446.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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