EWM27452.1, cds3215 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|585109707|gb|EWM27452.1| (soluble nsf attachment protein gamma isoform [Nannochloropsis gaditana]) HSP 1 Score: 960.674 bits (2482), Expect = 0.000e+0 Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0
Query: 1 MSTFSSDRSALFAKSTDGKGSKSTSPNRPGTTSTFTTPSARGSSTLSSTRHTPLSSYRTGDVAAAVPKRMNLEKLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQIAKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWLAPDQGESVDLRSAPLASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTVDRISGGLGGEEEEEEEEEEEKEGRNGGPQHGGMGPSLSAPEAPLLLLLLPALSLLRPGPFPQGRSCRGGRLPPPCRPNLPLPPPLFPLPPPSSSNGAKPKHRPLLPPRSQGGSLFLLNLPR 474
MSTFSSDRSALFAKSTDGKGSKSTSPNRPGTTSTFTTPSARGSSTLSSTRHTPLSSYRTGDVAAAVPKRMNLEKLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQIAKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWLAPDQGESVDLRSAPLASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTVDRISGGLGGEEEEEEEEEEEKEGRNGGPQHGGMGPSLSAPEAPLLLLLLPALSLLRPGPFPQGRSCRGGRLPPPCRPNLPLPPPLFPLPPPSSSNGAKPKHRPLLPPRSQGGSLFLLNLPR
Sbjct: 1 MSTFSSDRSALFAKSTDGKGSKSTSPNRPGTTSTFTTPSARGSSTLSSTRHTPLSSYRTGDVAAAVPKRMNLEKLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQIAKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWLAPDQGESVDLRSAPLASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTVDRISGGLGGEEEEEEEEEEEKEGRNGGPQHGGMGPSLSAPEAPLLLLLLPALSLLRPGPFPQGRSCRGGRLPPPCRPNLPLPPPLFPLPPPSSSNGAKPKHRPLLPPRSQGGSLFLLNLPR 474
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|299470309|emb|CBN78359.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.895 bits (359), Expect = 3.078e-33 Identity = 105/351 (29.91%), Postives = 178/351 (50.71%), Query Frame = 0
Query: 6 SDRSALFAKSTDGKGSKSTSPNRPGTTSTFTTPSARGSSTLSSTRHTPLSSYRTGDVAAAVPKRMNLEKLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSA--ECNEKTSTYAAAAMAYRNAAQIAKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWLAPDQGESVDLRSAPLAS-DVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV 353
+D+ +LFA T K +K +S P S P+A GS + S + G AA +R +++ +KEAE++ +A K L T W PD+ SAAP F+KA + Y+AAG + +A A +M++ +C++ +A+AA +R AA I + + E A R A+ W+ + GRAA+ ++ V+D+ A + + P+ +S + + S +VL +++ ++ ++++ + +L A+G+ SL +MY T +L L +GD V AD F VHLQ + Y+RS EC E LL A K L A + L+ ++++ A+ L V
Sbjct: 2 ADKKSLFAGRTGDKTAKLSSA--PKKRSGNVMPAASGSGEEKAPPSFGKSGFGKG--VAATQQRRDVQ-VKEAEEYLKQANKML-TKTLTRWNPDFFSAAPLFEKAGACYRAAGEDGKATAMFMQAGDCQCHDSVMAHASAAKDFREAALITERQGRREEAAAFYMRCAEAWMHADEPGRAAEYFGRSAKLVKDSDEDAAAERFVTASKVMVPNGSDSRSNFTRVVGSVEVLVQAIIFLASTNRLEQSMEVLSRYVIILEAEGMEHSLGRMYLTYCILALALGDYVRADMAFRNVHLQSTAYLRSEECRVEEELLIAFKDSRPDLLMEAQKDRTLHRLETAIVRIAKSLRV 346
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|698808202|ref|XP_009837130.1| (hypothetical protein H257_11796 [Aphanomyces astaci] >gi|574107745|gb|ETV73255.1| hypothetical protein H257_11796 [Aphanomyces astaci]) HSP 1 Score: 112.464 bits (280), Expect = 6.756e-24 Identity = 92/290 (31.72%), Postives = 145/290 (50.00%), Query Frame = 0
Query: 74 KLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQ--IAKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWLAPDQGESVDLRSAP----LASDVLSRSLNLCLRNEQVHPALD--ISDKAGRVLRAQGLTS--SLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV 353
KL+EAE+ KA K LKT++F W DY+SA PY +KAA ++A +A + Y++ AE K AAM AA+ + ++ AA E A + G++G+AA+ L+K +E+ V Y +L E+ DL A A DV +S + L+ + A D +++ A ++L Q + ++YK + + VL L DVVAAD+ ++ HLQD GY+ + EC +E+L+ A K L+ + YLD + + AR LT+
Sbjct: 4 KLREAEENLHKAEKHLKTTMF-RWSADYMSATPYLEKAAEGFRAGQDFARASSTYVRLAEIQHKNQATFRAAMHMETAAKLHLQYAPKQPGAAKEYYQTAAAYYGETGELGKAAEMLLKGAAALEE------VGYTDVEKMYL-----EACDLMEAQDKPHFAVDVFRKSASFFLKRK----AYDDVVANYAKQILLFQAIDQKENMYKAFVSIVVLHLAKPDVVAADQAYMR-HLQDDGYLHTDECALSEDLIGAFKRGDEEQLKVVLKKPHWQYLDTPIGRLARTLTM 276
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|727146872|emb|CEG71110.1| (hypothetical protein RMATCC62417_06895 [Rhizopus microsporus] >gi|1178067505|gb|ORE21906.1| TPR-like protein [Rhizopus microsporus]) HSP 1 Score: 108.227 bits (269), Expect = 7.887e-23 Identity = 92/286 (32.17%), Postives = 142/286 (49.65%), Query Frame = 0
Query: 77 EAEQWRVKAVKTLKTS-------LFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAA-QIAKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAV-AYCLQGVSWLAPDQGESVDLRSAPLASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV 353
EAEQ R + VK L+ LF +PD+ AA Y+D+AA+ +K A + +QA AY K++E K + A A +AA IA + + A + R ++ ++ QG + RAA+ L KAG +E A Y + D+G A D+ ++++L +RN++ A+++ + +VL + LYK Y + +L IGD V A K F + QD+G+ S E E AE+LL A + LE V +LDN ++K AR LTV
Sbjct: 2 EAEQIR-EGVKNLQQGDKAASKGLFR--KPDWDLAASYYDRAATCFKIAQSYDQAVQAYAKASEALFKADSIHLAGKATESAAFIIAHNLNQPQRAADAYQRASNFFMTQGSIDRAAEQLDKAGRVLESVDVNAAFDMYSKACTLYEQEDRGR--------FAMDIYKKAVSLLVRNKKYDKAIEMLKRETQVLMKLSSRTHLYKAYLSILILIFAIGDDVEAGKQFSIMCGQDAGFAHSEEAEIAEDLLKAYDQRDQELLEKTVRLQHMTFLDNEIVKLARLLTV 276
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|1173944284|gb|OQR93042.1| (gamma-soluble NSF attachment protein [Achlya hypogyna]) HSP 1 Score: 110.153 bits (274), Expect = 8.181e-23 Identity = 77/284 (27.11%), Postives = 144/284 (50.70%), Query Frame = 0
Query: 73 EKLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQIAKVEEEEEAAGELLARE--ADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWLAPDQGESVDLRSAP-LASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV 353
+KL+E E+ KA K L TS+F W PDY++A+PY +KAA ++A A ++A +++ AE K AAM AA+I ++ A + + + + G++G+AA+ L+K +E A + V L + + ++ + P A D ++ ++ + A+ ++ + R+ G ++YK + + VL+ + DV+AAD+ ++ HLQD G++ S EC +E+L+ A K L+ + + YLD S+ + R +++
Sbjct: 5 KKLREGEEALAKAEKLLTTSMF-RWSPDYMAASPYLEKAAEAFRAGQALDRAAKTFVRLAEVQHKNGAVFRAAMHMETAAKIHLQYAPKQPAPAMQYYQLGSAYYSEMGELGKAAEMLLKGATALE--------AVGMMDVKHLYLEACDLMETQDKPHFAVDTFRKTAAFLIKRKDYADAVGNYERQIALFRSMGQKENMYKCFASIVVLKCAMQDVIAADQAYM-AHLQDDGFLSSDECALSEDLIGALKRSDDALLQVVLKKPTWQYLDTSIGRLVRTISL 278
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|511002353|gb|EPB83791.1| (hypothetical protein HMPREF1544_09475 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 109.768 bits (273), Expect = 8.238e-23 Identity = 84/286 (29.37%), Postives = 142/286 (49.65%), Query Frame = 0
Query: 70 MNLEKLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQI-AKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWL-APDQGESVDLRSAPLASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV 353
M+ E++++ ++ + K LF +PD+ AA Y+++AA+ +K A + +QA AY+K++E K A A NAA I A+ + + A E R ++ ++ QG + RAA+ L KAG +E+ + + S D+G A D+ ++++L +RN++ A+D+ + +L+ S LYK + +L IGD V A K F + D+G+ +S E E AE+LL A + + L +LDN V+K AR L V
Sbjct: 1 MDAEQIRDGVKYMQQGDKAASKGLF--RKPDWDVAASYYERAATAFKIAKSYDQAVQAYVKASEALSKADAIHLAGKALENAAFILAQNLNQPQRAAEAYQRASNYFMTQGSIDRAAEQLEKAGRALENVDVNASYDMYSKACSLFEQEDRGR--------FAVDIFKKAISLLIRNKKYDKAVDMLKRESVILQKFTARSHLYKANLSILILIFAIGDDVEAGKQFSYMCGNDAGFAQSEEAEIAEDLLKAYEERDQELLVKTTRLQHVTFLDNEVVKLARMLRV 276
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|813167036|ref|XP_012203834.1| (hypothetical protein SPRG_09348 [Saprolegnia parasitica CBS 223.65] >gi|641531330|gb|KDO25406.1| hypothetical protein SPRG_09348 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 110.153 bits (274), Expect = 8.575e-23 Identity = 82/287 (28.57%), Postives = 143/287 (49.83%), Query Frame = 0
Query: 73 EKLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQI--AKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWLAPDQGESVDLRSAP----LASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV 353
+K++E + KA K L T++F W PDY+SA+PY +KAA ++A A ++A Y++ AE K AAM AA+I ++ + A + + + G++G+AA+ L+K +E AV GVS + E+ DL A DV ++ ++++ A+ ++ + RA G ++YK + + VL+ + DV+AAD+ ++ HLQD G++ S EC +E+L+ A K L+ + YLD + + R L++
Sbjct: 5 KKVREGDDALAKAEKLLTTTMF-RWSPDYMSASPYLEKAAEAFRAGQALDRAAKTYVRLAEVQHKNGAVFRAAMHMETAAKIHLQYAPKQPQPAMQYYQMGSAYYSEMGELGKAAEMLMKGAAALE------AV-----GVSDVKHMYLEACDLMETQDKPHFAVDVFRKTAAFLVKHKDYADAVVNYERQVALFRAMGQKENMYKSFASIIVLKCAMQDVIAADQAYM-THLQDDGFLSSDECALSEDLIGALKRSDDAQLQVVLKKPQWQYLDTCIGRLVRTLSL 278
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|758349467|dbj|GAN08329.1| (glycosyltransferase family 2 protein [Mucor ambiguus]) HSP 1 Score: 108.997 bits (271), Expect = 1.706e-21 Identity = 79/258 (30.62%), Postives = 129/258 (50.00%), Query Frame = 0
Query: 98 QPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQI-AKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAVAYCLQGVSWL-APDQGESVDLRSAPLASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV 353
+PD+ AA Y+++AA+ +K A + +QA AY+K++E K A A NAA I A+ + + A E R ++ ++ QG + RAA+ L KAG +E+ + + S D+G A D+ ++++L +RN++ A+D+ + +L+ S LYK + +L IGD V A K F + D+G+ +S E E AE+LL A + + L +LDN V+K AR L V
Sbjct: 872 KPDWDVAASYYERAATAFKIAKSYDQAVQAYVKASEALSKADAIHLAGKALENAAFILAQNLNQPQRAAEAYQRASNYFMTQGSIDRAAEQLEKAGRALENVDVNASYDMYSKACSLFEQEDRGR--------FAVDIFKKAISLLIRNKKYDKAIDMLKRESVILQKFTARSHLYKANLSILILIFAIGDDVEAGKQFSAMCGNDAGFAQSEEAEIAEDLLKAYEERDQELLVKTTRLQHVTFLDNEVVKLARMLRV 1121
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|1043298101|gb|OBZ83373.1| (Gamma-soluble NSF attachment protein [Choanephora cucurbitarum]) HSP 1 Score: 105.145 bits (261), Expect = 3.173e-21 Identity = 85/286 (29.72%), Postives = 142/286 (49.65%), Query Frame = 0
Query: 70 MNLEKLKEAEQWRVKAVKTLKTSLFGNWQPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQI-AKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAV-AYCLQGVSWLAPDQGESVDLRSAPLASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV 353
M+ E++++ + + K LF +PD+ AA +++AA+ +K A + +QA AY+K+++ K A A NAA I A + + A EL R ++ ++ QG + RAA+ L KAG +E+ + Y + D+G A D+ R+++L +RN++ A+++ + VL+ S LYK + +L IGD V A K F + D+G+ +S E + A++LL A + LE V +LDN V+K AR LTV
Sbjct: 1 MDAEQIRDGVKNMQQGDKAASKGLF--RKPDWDLAASCYERAATSFKIAKSSDQAVQAYIKASDALSKADATHLAGKALENAAFILAHDLNQPQRAAELYQRASNYFMTQGSIDRAAEQLEKAGRALENVDVNASYDMYSKACTIYEQEDRGR--------FAVDIFKRAVSLLIRNKKYDKAIEMLKRQSIVLQKFTSRSHLYKANLSILILIFAIGDDVEAGKQFSYMCGNDAGFAQSEEAQIAQDLLQAYDERDQELLERTVRLQHVTFLDNEVVKLARLLTV 276
BLAST of EWM27452.1 vs. NCBI_GenBank
Match: gi|671694050|emb|CDS08778.1| (hypothetical protein LRAMOSA10139 [Lichtheimia ramosa]) HSP 1 Score: 105.531 bits (262), Expect = 4.686e-21 Identity = 80/269 (29.74%), Postives = 137/269 (50.93%), Query Frame = 0
Query: 98 QPDYLSAAPYFDKAASLYKAAGAEEQAKAAYMKSAECNEKTSTYAAAAMAYRNAAQI-AKVEEEEEAAGELLAREADMWVLQGDVGRAADSLVKAGVQVEDACPKQAV-AYCLQGVSWLAPDQGESVDLRSAPLASDVLSRSLNLCLRNEQVHPALDISDKAGRVLRAQGLTSSLYKMYCTTTVLQLYIGDVVAADKTFLEVHLQDSGYIRSVECECAENLLSAAKGLSRTALEGAVHALSRAYLDNSVLKFARRLTV--DRISGGLGG 362
+PD+ A+ +D+AA+ +K A + +QA AYMK++E K A A N A I A+ + + A E+ R +D+++ G + RAA+ L KAG +E+ A+ Y + D+G +A D+ ++++L +++++ A+D+ + VLR S L+K + ++ IGD V A K F + D+G+ +S E E + LL A + + LE V ++LDN V K +R LTV + +S G+G
Sbjct: 27 KPDWDIASGCYDQAATCFKLAKSYDQAVQAYMKASEAFFKADATHLAGKALENGALIVAQNMNQPQRAAEMYQRASDLFMTAGSIDRAAEQLQKAGRALENTDVNAAIEMYSAACGLYEQEDRGR--------MAIDIFKKAISLLIQSKKYEKAVDMLHRQSAVLRKLTNRSHLFKANLSVMIVLFAIGDEVEAGKQFNMMCSTDAGFAQSEEAEIGQALLQAYEEGDQELLEQTVRRQHISFLDNEVAKLSRTLTVPGEMLSSGMGA 287 The following BLAST results are available for this feature:
BLAST of EWM27452.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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